RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 MRE11P49959 708 aa16.64■□□□□ 0.25
TNFRSF1A-204ENST00000440083 STK38Q15208 465 aa16.64■□□□□ 0.25
TNFRSF1A-204ENST00000440083 MTFR1Q15390 333 aa16.64■□□□□ 0.25
TNFRSF1A-204ENST00000440083 NSMFQ6X4W1 530 aa16.64■□□□□ 0.25
TNFRSF1A-204ENST00000440083 FBXO11Q86XK2 927 aa16.64■□□□□ 0.25
TNFRSF1A-204ENST00000440083 ANKRD35Q8N283 1001 aa16.64■□□□□ 0.25
TNFRSF1A-204ENST00000440083 PURBQ96QR8 312 aaKnown RBP16.64■□□□□ 0.25
TNFRSF1A-204ENST00000440083 BRMS1Q9HCU9 246 aa16.64■□□□□ 0.25
TNFRSF1A-204ENST00000440083 GJB4Q9NTQ9 266 aa16.64■□□□□ 0.25
TNFRSF1A-204ENST00000440083 FBXO40Q9UH90 709 aa16.64■□□□□ 0.25
TNFRSF1A-204ENST00000440083 SYCE3A1L190 88 aa16.63■□□□□ 0.25
TNFRSF1A-204ENST00000440083 KIF28PB7ZC32 967 aa16.63■□□□□ 0.25
TNFRSF1A-204ENST00000440083 ZBTB5O15062 677 aa16.63■□□□□ 0.25
TNFRSF1A-204ENST00000440083 YEATS4O95619 227 aa16.63■□□□□ 0.25
TNFRSF1A-204ENST00000440083 MMP1P03956 469 aa16.63■□□□□ 0.25
TNFRSF1A-204ENST00000440083 XRCC5P13010 732 aaKnown RBP16.63■□□□□ 0.25
TNFRSF1A-204ENST00000440083 CNTN2Q02246 1040 aa16.63■□□□□ 0.25
TNFRSF1A-204ENST00000440083 SF3A1Q15459 793 aaKnown RBP16.63■□□□□ 0.25
TNFRSF1A-204ENST00000440083 ZNF792Q3KQV3 632 aa16.63■□□□□ 0.25
TNFRSF1A-204ENST00000440083 SLC30A10Q6XR72 485 aa16.63■□□□□ 0.25
TNFRSF1A-204ENST00000440083 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.63■□□□□ 0.25
TNFRSF1A-204ENST00000440083 PXYLP1Q8TE99 480 aa16.63■□□□□ 0.25
TNFRSF1A-204ENST00000440083 FGD4Q96M96 766 aa16.63■□□□□ 0.25
TNFRSF1A-204ENST00000440083 SPZ1Q9BXG8 430 aa16.63■□□□□ 0.25
TNFRSF1A-204ENST00000440083 RTEL1Q9NZ71 1219 aa16.63■□□□□ 0.25
TNFRSF1A-204ENST00000440083 RCOR1Q9UKL0 485 aa16.63■□□□□ 0.25
TNFRSF1A-204ENST00000440083 KIAA0100Q14667 2235 aaKnown RBP16.62■□□□□ 0.25
TNFRSF1A-204ENST00000440083 RBBP6Q7Z6E9 1792 aaKnown RBP16.62■□□□□ 0.25
TNFRSF1A-204ENST00000440083 DNAJC25-GNG10A0A024R161 153 aa16.62■□□□□ 0.25
TNFRSF1A-204ENST00000440083 CCDC85CA6NKD9 419 aa16.62■□□□□ 0.25
TNFRSF1A-204ENST00000440083 CAPN15O75808 1086 aa16.62■□□□□ 0.25
TNFRSF1A-204ENST00000440083 HMGCRP04035 888 aa16.62■□□□□ 0.25
TNFRSF1A-204ENST00000440083 CYP2C19P33261 490 aa16.62■□□□□ 0.25
TNFRSF1A-204ENST00000440083 FUT2Q10981 343 aa16.62■□□□□ 0.25
TNFRSF1A-204ENST00000440083 LRSAM1Q6UWE0 723 aa16.62■□□□□ 0.25
TNFRSF1A-204ENST00000440083 KCNG4Q8TDN1 519 aa16.62■□□□□ 0.25
TNFRSF1A-204ENST00000440083 TBC1D5Q92609 795 aa16.62■□□□□ 0.25
TNFRSF1A-204ENST00000440083 LZTS2Q9BRK4 669 aa16.62■□□□□ 0.25
TNFRSF1A-204ENST00000440083 GRPEL1Q9HAV7 217 aa16.62■□□□□ 0.25
TNFRSF1A-204ENST00000440083 ASTN1O14525 1302 aa16.62■□□□□ 0.25
TNFRSF1A-204ENST00000440083 ABCB11O95342 1321 aa16.62■□□□□ 0.25
TNFRSF1A-204ENST00000440083 PNMA6FA0A0J9YX94 578 aa16.61■□□□□ 0.25
TNFRSF1A-204ENST00000440083 OPLAHO14841 1288 aa16.61■□□□□ 0.25
TNFRSF1A-204ENST00000440083 PRKAR2AP13861 404 aaKnown RBP16.61■□□□□ 0.25
TNFRSF1A-204ENST00000440083 ME1P48163 572 aa16.61■□□□□ 0.25
TNFRSF1A-204ENST00000440083 BAATQ14032 418 aaPredicted RBP16.61■□□□□ 0.25
TNFRSF1A-204ENST00000440083 CCDC73Q6ZRK6 1079 aa16.61■□□□□ 0.25
TNFRSF1A-204ENST00000440083 DIS3L2Q8IYB7 885 aaKnown RBP16.61■□□□□ 0.25
TNFRSF1A-204ENST00000440083 RRP36Q96EU6 259 aaKnown RBP16.61■□□□□ 0.25
TNFRSF1A-204ENST00000440083 MAML3Q96JK9 1138 aa16.61■□□□□ 0.25
TNFRSF1A-204ENST00000440083 AMNQ9BXJ7 453 aa16.61■□□□□ 0.25
TNFRSF1A-204ENST00000440083 FTOQ9C0B1 505 aaKnown RBP eCLIP16.61■□□□□ 0.25
TNFRSF1A-204ENST00000440083 UNC93B1Q9H1C4 597 aa16.61■□□□□ 0.25
TNFRSF1A-204ENST00000440083 FOXP1Q9H334 677 aaPredicted RBP16.61■□□□□ 0.25
TNFRSF1A-204ENST00000440083 DDX19AQ9NUU7 478 aaKnown RBP16.61■□□□□ 0.25
TNFRSF1A-204ENST00000440083 POLR3EQ9NVU0 708 aa16.61■□□□□ 0.25
TNFRSF1A-204ENST00000440083 CYP39A1Q9NYL5 469 aa16.61■□□□□ 0.25
TNFRSF1A-204ENST00000440083 KCNJ14Q9UNX9 436 aa16.61■□□□□ 0.25
TNFRSF1A-204ENST00000440083 V9GY48 417 aaPredicted RBP16.61■□□□□ 0.25
TNFRSF1A-204ENST00000440083 SOWAHBA6NEL2 793 aa16.6■□□□□ 0.25
TNFRSF1A-204ENST00000440083 POTEB2H3BUK9 544 aa16.6■□□□□ 0.25
TNFRSF1A-204ENST00000440083 IGHA2P01877 340 aa16.6■□□□□ 0.25
TNFRSF1A-204ENST00000440083 CCL5P13501 91 aa16.6■□□□□ 0.25
TNFRSF1A-204ENST00000440083 U2AF2P26368 475 aaKnown RBP eCLIP16.6■□□□□ 0.25
TNFRSF1A-204ENST00000440083 KRT2P35908 639 aa16.6■□□□□ 0.25
TNFRSF1A-204ENST00000440083 SOX10P56693 466 aa16.6■□□□□ 0.25
TNFRSF1A-204ENST00000440083 ANO1Q5XXA6 986 aa16.6■□□□□ 0.25
TNFRSF1A-204ENST00000440083 NOSTRINQ8IVI9 506 aa16.6■□□□□ 0.25
TNFRSF1A-204ENST00000440083 FAM133AQ8N9E0 248 aa16.6■□□□□ 0.25
TNFRSF1A-204ENST00000440083 VPS54Q9P1Q0 977 aa16.6■□□□□ 0.25
TNFRSF1A-204ENST00000440083 PCDHA1Q9Y5I3 950 aa16.6■□□□□ 0.25
TNFRSF1A-204ENST00000440083 MCM3APO60318 1980 aa16.6■□□□□ 0.25
TNFRSF1A-204ENST00000440083 SCG2P13521 617 aa16.59■□□□□ 0.25
TNFRSF1A-204ENST00000440083 CALML3P27482 149 aa16.59■□□□□ 0.25
TNFRSF1A-204ENST00000440083 SMARCA1P28370 1054 aa16.59■□□□□ 0.25
TNFRSF1A-204ENST00000440083 NASPP49321 788 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF1A-204ENST00000440083 CACNB2Q08289 660 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF1A-204ENST00000440083 OLFML2BQ68BL8 750 aa16.59■□□□□ 0.25
TNFRSF1A-204ENST00000440083 TRPV1Q8NER1 839 aa16.59■□□□□ 0.25
TNFRSF1A-204ENST00000440083 GPKOWQ92917 476 aaPredicted RBP eCLIP16.59■□□□□ 0.25
TNFRSF1A-204ENST00000440083 PGBD1Q96JS3 809 aa16.59■□□□□ 0.25
TNFRSF1A-204ENST00000440083 NUP62CLQ9H1M0 184 aa16.59■□□□□ 0.25
TNFRSF1A-204ENST00000440083 TSPY26PQ9H489 355 aa16.59■□□□□ 0.25
TNFRSF1A-204ENST00000440083 SEC63Q9UGP8 760 aaKnown RBP16.59■□□□□ 0.25
TNFRSF1A-204ENST00000440083 PNMA2Q9UL42 364 aa16.59■□□□□ 0.25
TNFRSF1A-204ENST00000440083 MRPL11Q9Y3B7 192 aaKnown RBP16.59■□□□□ 0.25
TNFRSF1A-204ENST00000440083 CLIC4Q9Y696 253 aa16.59■□□□□ 0.25
TNFRSF1A-204ENST00000440083 PFASO15067 1338 aa16.59■□□□□ 0.25
TNFRSF1A-204ENST00000440083 CENPFP49454 3210 aa16.59■□□□□ 0.25
TNFRSF1A-204ENST00000440083 SPTLC2O15270 562 aa16.58■□□□□ 0.24
TNFRSF1A-204ENST00000440083 LIG1P18858 919 aa16.58■□□□□ 0.24
TNFRSF1A-204ENST00000440083 CCND3P30281 292 aaPredicted RBP16.58■□□□□ 0.24
TNFRSF1A-204ENST00000440083 RPS6P62753 249 aaKnown RBP16.58■□□□□ 0.24
TNFRSF1A-204ENST00000440083 UBXN2AP68543 259 aa16.58■□□□□ 0.24
TNFRSF1A-204ENST00000440083 PKN1Q16512 942 aa16.58■□□□□ 0.24
TNFRSF1A-204ENST00000440083 PFKFB3Q16875 520 aaPredicted RBP16.58■□□□□ 0.24
TNFRSF1A-204ENST00000440083 PRAMEF19Q5SWL8 479 aa16.58■□□□□ 0.24
TNFRSF1A-204ENST00000440083 MAP3K21Q5TCX8 1036 aa16.58■□□□□ 0.24
TNFRSF1A-204ENST00000440083 MFSD14CQ5VZR4 134 aa16.58■□□□□ 0.24
TNFRSF1A-204ENST00000440083 RNF207Q6ZRF8 634 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms