RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 TRIM58Q8NG06 486 aa12.63□□□□□ -0.39
CCBE1-202ENST00000439986 TGFBRAP1Q8WUH2 860 aa12.63□□□□□ -0.39
CCBE1-202ENST00000439986 SPDL1Q96EA4 605 aa12.63□□□□□ -0.39
CCBE1-202ENST00000439986 CCNL1Q9UK58 526 aaPredicted RBP12.63□□□□□ -0.39
CCBE1-202ENST00000439986 LAMC1P11047 1609 aa12.63□□□□□ -0.39
CCBE1-202ENST00000439986 SH3TC1Q8TE82 1336 aa12.63□□□□□ -0.39
CCBE1-202ENST00000439986 CFAP74Q9C0B2 1584 aa12.63□□□□□ -0.39
CCBE1-202ENST00000439986 SOWAHDA6NJG2 315 aa12.63□□□□□ -0.39
CCBE1-202ENST00000439986 M0R2C6 588 aa12.63□□□□□ -0.39
CCBE1-202ENST00000439986 TBC1D8O95759 1140 aa12.63□□□□□ -0.39
CCBE1-202ENST00000439986 PDHA1P08559 390 aa12.63□□□□□ -0.39
CCBE1-202ENST00000439986 CCDC84Q86UT8 332 aaPredicted RBP12.63□□□□□ -0.39
CCBE1-202ENST00000439986 PUS3Q9BZE2 481 aaKnown RBP12.63□□□□□ -0.39
CCBE1-202ENST00000439986 ITGB1BP2Q9UKP3 347 aa12.63□□□□□ -0.39
CCBE1-202ENST00000439986 COBLO75128 1261 aa12.63□□□□□ -0.39
CCBE1-202ENST00000439986 SESTD1Q86VW0 696 aa12.63□□□□□ -0.39
CCBE1-202ENST00000439986 CSRNP2Q9H175 543 aa12.63□□□□□ -0.39
CCBE1-202ENST00000439986 VCXQ9H320 206 aa12.63□□□□□ -0.39
CCBE1-202ENST00000439986 CNGB3Q9NQW8 809 aa12.63□□□□□ -0.39
CCBE1-202ENST00000439986 SAMSN1Q9NSI8 373 aaKnown RBP12.63□□□□□ -0.39
CCBE1-202ENST00000439986 IQSEC2Q5JU85 1478 aa12.63□□□□□ -0.39
CCBE1-202ENST00000439986 CD19P15391 556 aa12.63□□□□□ -0.39
CCBE1-202ENST00000439986 LTKP29376 864 aa12.63□□□□□ -0.39
CCBE1-202ENST00000439986 PDE6BP35913 854 aa12.63□□□□□ -0.39
CCBE1-202ENST00000439986 NSMFQ6X4W1 530 aa12.63□□□□□ -0.39
CCBE1-202ENST00000439986 RRAGAQ7L523 313 aa12.63□□□□□ -0.39
CCBE1-202ENST00000439986 SYMPKQ92797 1274 aaKnown RBP12.63□□□□□ -0.39
CCBE1-202ENST00000439986 CAPS2Q9BXY5 557 aa12.63□□□□□ -0.39
CCBE1-202ENST00000439986 DIAPH2O60879 1101 aa12.62□□□□□ -0.39
CCBE1-202ENST00000439986 PTPN12Q05209 780 aaKnown RBP12.62□□□□□ -0.39
CCBE1-202ENST00000439986 DCUN1D2Q6PH85 259 aa12.62□□□□□ -0.39
CCBE1-202ENST00000439986 DDX17Q92841 729 aaKnown RBP12.62□□□□□ -0.39
CCBE1-202ENST00000439986 OSBPL5Q9H0X9 879 aaPredicted RBP12.62□□□□□ -0.39
CCBE1-202ENST00000439986 DKK3Q9UBP4 350 aa12.62□□□□□ -0.39
CCBE1-202ENST00000439986 PPP1R9AQ9ULJ8 1098 aa12.62□□□□□ -0.39
CCBE1-202ENST00000439986 SPDYE16A6NNV3 312 aaPredicted RBP12.62□□□□□ -0.39
CCBE1-202ENST00000439986 SPDYE2Q495Y8 402 aa12.62□□□□□ -0.39
CCBE1-202ENST00000439986 SNX29Q8TEQ0 813 aa12.62□□□□□ -0.39
CCBE1-202ENST00000439986 GPR101Q96P66 508 aaPredicted RBP12.62□□□□□ -0.39
CCBE1-202ENST00000439986 GGA1Q9UJY5 639 aa12.62□□□□□ -0.39
CCBE1-202ENST00000439986 MAN1B1Q9UKM7 699 aa12.62□□□□□ -0.39
CCBE1-202ENST00000439986 TSPAN9O75954 239 aa12.62□□□□□ -0.39
CCBE1-202ENST00000439986 ADORA1P30542 326 aa12.62□□□□□ -0.39
CCBE1-202ENST00000439986 FAM47CQ5HY64 1035 aa12.62□□□□□ -0.39
CCBE1-202ENST00000439986 SMYD4Q8IYR2 804 aaPredicted RBP12.62□□□□□ -0.39
CCBE1-202ENST00000439986 AIFM3Q96NN9 605 aa12.62□□□□□ -0.39
CCBE1-202ENST00000439986 KLHL42Q9P2K6 505 aa12.62□□□□□ -0.39
CCBE1-202ENST00000439986 EFCAB6Q5THR3 1501 aa12.62□□□□□ -0.39
CCBE1-202ENST00000439986 YEATS2Q9ULM3 1422 aa12.62□□□□□ -0.39
CCBE1-202ENST00000439986 BUB1BO60566 1050 aaPredicted RBP12.62□□□□□ -0.39
CCBE1-202ENST00000439986 RPSAP08865 295 aaKnown RBP12.62□□□□□ -0.39
CCBE1-202ENST00000439986 DNM2P50570 870 aa12.62□□□□□ -0.39
CCBE1-202ENST00000439986 COPB1P53618 953 aaKnown RBP12.62□□□□□ -0.39
CCBE1-202ENST00000439986 GYS2P54840 703 aa12.62□□□□□ -0.39
CCBE1-202ENST00000439986 PPARAQ07869 468 aa12.62□□□□□ -0.39
CCBE1-202ENST00000439986 ITKQ08881 620 aa12.62□□□□□ -0.39
CCBE1-202ENST00000439986 RUFY4Q6ZNE9 571 aa12.62□□□□□ -0.39
CCBE1-202ENST00000439986 UBL4BQ8N7F7 174 aa12.62□□□□□ -0.39
CCBE1-202ENST00000439986 ENOX1Q8TC92 643 aaKnown RBP12.62□□□□□ -0.39
CCBE1-202ENST00000439986 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.62□□□□□ -0.39
CCBE1-202ENST00000439986 TSC22D4Q9Y3Q8 395 aa12.62□□□□□ -0.39
CCBE1-202ENST00000439986 CAPN7Q9Y6W3 813 aa12.62□□□□□ -0.39
CCBE1-202ENST00000439986 PCK1P35558 622 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 LONP1P36776 959 aaKnown RBP12.61□□□□□ -0.39
CCBE1-202ENST00000439986 ATP1A2P50993 1020 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 KRT17Q04695 432 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 OSBP2Q969R2 916 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 GSDMAQ96QA5 445 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 PRDM5Q9NQX1 630 aaPredicted RBP12.61□□□□□ -0.39
CCBE1-202ENST00000439986 GJB4Q9NTQ9 266 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 SYNJ2BP-COX16A0A087WUM0 186 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 H7C1D1 291 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 TROVE2P10155 538 aaKnown RBP eCLIP12.61□□□□□ -0.39
CCBE1-202ENST00000439986 FAM102BQ5T8I3 360 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 DSTYKQ6XUX3 929 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 TPH2Q8IWU9 490 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 GPR108Q9NPR9 543 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 COX16Q9P0S2 106 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 USH1CQ9Y6N9 552 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 KDM1AO60341 852 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 CCT5P48643 541 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 TCIRG1Q13488 830 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 VWA3BQ502W6 1294 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 ANKRD42Q8N9B4 389 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 ZC3H15Q8WU90 426 aaKnown RBP12.61□□□□□ -0.39
CCBE1-202ENST00000439986 CLMNQ96JQ2 1002 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 SMAD5Q99717 465 aaKnown RBP12.61□□□□□ -0.39
CCBE1-202ENST00000439986 NLRC4Q9NPP4 1024 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 LRRIQ1Q96JM4 1722 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 MED23Q9ULK4 1368 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 RNF40O75150 1001 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 PHKG2P15735 406 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 GUCY2FP51841 1108 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 CALCRLQ16602 461 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 TNKSO95271 1327 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 GIPC1O14908 333 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 SAT1P21673 171 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 ECE1P42892 770 aa12.61□□□□□ -0.39
CCBE1-202ENST00000439986 FMR1NBQ8N0W7 255 aaPredicted RBP12.61□□□□□ -0.39
CCBE1-202ENST00000439986 ANKRD7Q92527 254 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms