RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 CHAMP1Q96JM3 812 aa23.57■■□□□ 1.36
CHD3-204ENST00000439235 TFIP11Q9UBB9 837 aaKnown RBP23.57■■□□□ 1.36
CHD3-204ENST00000439235 CNPY2Q9Y2B0 182 aa23.57■■□□□ 1.36
CHD3-204ENST00000439235 FRMPD4Q14CM0 1322 aa23.57■■□□□ 1.36
CHD3-204ENST00000439235 RPTORQ8N122 1335 aa23.57■■□□□ 1.36
CHD3-204ENST00000439235 GOLGA6L22H0YM25 854 aa23.56■■□□□ 1.36
CHD3-204ENST00000439235 POTEB2H3BUK9 544 aa23.56■■□□□ 1.36
CHD3-204ENST00000439235 FIBPO43427 364 aa23.56■■□□□ 1.36
CHD3-204ENST00000439235 GCFC2P16383 781 aaKnown RBP23.56■■□□□ 1.36
CHD3-204ENST00000439235 NASPP49321 788 aaPredicted RBP23.56■■□□□ 1.36
CHD3-204ENST00000439235 USP11P51784 963 aa23.56■■□□□ 1.36
CHD3-204ENST00000439235 SF3A1Q15459 793 aaKnown RBP23.56■■□□□ 1.36
CHD3-204ENST00000439235 CFHR5Q9BXR6 569 aa23.56■■□□□ 1.36
CHD3-204ENST00000439235 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.56■■□□□ 1.36
CHD3-204ENST00000439235 PCDHB6Q9Y5E3 794 aa23.56■■□□□ 1.36
CHD3-204ENST00000439235 SMCHD1A6NHR9 2005 aa23.55■■□□□ 1.36
CHD3-204ENST00000439235 STRNO43815 780 aa23.55■■□□□ 1.36
CHD3-204ENST00000439235 CEBPZQ03701 1054 aaKnown RBP23.55■■□□□ 1.36
CHD3-204ENST00000439235 NBR1Q14596 966 aa23.55■■□□□ 1.36
CHD3-204ENST00000439235 STK38Q15208 465 aa23.55■■□□□ 1.36
CHD3-204ENST00000439235 ARHGEF16Q5VV41 709 aa23.55■■□□□ 1.36
CHD3-204ENST00000439235 MOXD1Q6UVY6 613 aa23.55■■□□□ 1.36
CHD3-204ENST00000439235 DNERQ8NFT8 737 aa23.55■■□□□ 1.36
CHD3-204ENST00000439235 SPATA32Q96LK8 384 aa23.55■■□□□ 1.36
CHD3-204ENST00000439235 TAAR1Q96RJ0 339 aa23.55■■□□□ 1.36
CHD3-204ENST00000439235 RMDN3Q96TC7 470 aa23.55■■□□□ 1.36
CHD3-204ENST00000439235 FTOQ9C0B1 505 aaKnown RBP eCLIP23.55■■□□□ 1.36
CHD3-204ENST00000439235 CLIC4Q9Y696 253 aa23.55■■□□□ 1.36
CHD3-204ENST00000439235 CCNT1O60563 726 aaKnown RBP23.54■■□□□ 1.36
CHD3-204ENST00000439235 CYP3A4P08684 503 aa23.54■■□□□ 1.36
CHD3-204ENST00000439235 GPR142Q7Z601 462 aa23.54■■□□□ 1.36
CHD3-204ENST00000439235 PLEKHH3Q7Z736 793 aa23.54■■□□□ 1.36
CHD3-204ENST00000439235 NSUN6Q8TEA1 469 aaKnown RBP23.54■■□□□ 1.36
CHD3-204ENST00000439235 CRYGNQ8WXF5 182 aa23.54■■□□□ 1.36
CHD3-204ENST00000439235 PXMP2Q9NR77 195 aa23.54■■□□□ 1.36
CHD3-204ENST00000439235 ADD3Q9UEY8 706 aaKnown RBP23.54■■□□□ 1.36
CHD3-204ENST00000439235 MCM7P33993 719 aa23.53■■□□□ 1.36
CHD3-204ENST00000439235 ZNF174Q15697 407 aa23.53■■□□□ 1.36
CHD3-204ENST00000439235 PPP4R3AQ6IN85 833 aa23.53■■□□□ 1.36
CHD3-204ENST00000439235 XRRA1Q6P2D8 792 aa23.53■■□□□ 1.36
CHD3-204ENST00000439235 LINC00301Q8NCQ3 95 aa23.53■■□□□ 1.36
CHD3-204ENST00000439235 KCNG4Q8TDN1 519 aa23.53■■□□□ 1.36
CHD3-204ENST00000439235 LEO1Q8WVC0 666 aaPredicted RBP23.53■■□□□ 1.36
CHD3-204ENST00000439235 MPHOSPH6Q99547 160 aaKnown RBP23.53■■□□□ 1.36
CHD3-204ENST00000439235 PCNTO95613 3336 aa23.53■■□□□ 1.36
CHD3-204ENST00000439235 B4DLN1 442 aa23.52■■□□□ 1.36
CHD3-204ENST00000439235 WNT7AO00755 349 aa23.52■■□□□ 1.36
CHD3-204ENST00000439235 EIF2AK2P19525 551 aaKnown RBP23.52■■□□□ 1.36
CHD3-204ENST00000439235 PTPREP23469 700 aa23.52■■□□□ 1.36
CHD3-204ENST00000439235 CIITAP33076 1130 aa23.52■■□□□ 1.36
CHD3-204ENST00000439235 ZNF76P36508 570 aa23.52■■□□□ 1.36
CHD3-204ENST00000439235 SLC39A14Q15043 492 aa23.52■■□□□ 1.36
CHD3-204ENST00000439235 PCNX4Q63HM2 1172 aa23.52■■□□□ 1.36
CHD3-204ENST00000439235 FAM133AQ8N9E0 248 aa23.52■■□□□ 1.36
CHD3-204ENST00000439235 PDCD2LQ9BRP1 358 aa23.52■■□□□ 1.36
CHD3-204ENST00000439235 R3HDMLQ9H3Y0 253 aa23.52■■□□□ 1.36
CHD3-204ENST00000439235 RNF186Q9NXI6 227 aa23.52■■□□□ 1.36
CHD3-204ENST00000439235 RCOR1Q9UKL0 485 aa23.52■■□□□ 1.36
CHD3-204ENST00000439235 MORC2Q9Y6X9 1032 aaPredicted RBP23.52■■□□□ 1.36
CHD3-204ENST00000439235 DNAJC25-GNG10A0A024R161 153 aa23.51■■□□□ 1.35
CHD3-204ENST00000439235 CYP3A7-CYP3A51PA0A087WV96 503 aa23.51■■□□□ 1.35
CHD3-204ENST00000439235 SLC15A5A6NIM6 579 aa23.51■■□□□ 1.35
CHD3-204ENST00000439235 LAD1O00515 517 aa23.51■■□□□ 1.35
CHD3-204ENST00000439235 NEMFO60524 1076 aa23.51■■□□□ 1.35
CHD3-204ENST00000439235 TDP2O95551 362 aa23.51■■□□□ 1.35
CHD3-204ENST00000439235 HSPA1AP0DMV8 641 aaKnown RBP23.51■■□□□ 1.35
CHD3-204ENST00000439235 HSPA1BP0DMV9 641 aaKnown RBP23.51■■□□□ 1.35
CHD3-204ENST00000439235 CYP3A7P24462 503 aa23.51■■□□□ 1.35
CHD3-204ENST00000439235 CCND2P30279 289 aa23.51■■□□□ 1.35
CHD3-204ENST00000439235 UBXN2AP68543 259 aa23.51■■□□□ 1.35
CHD3-204ENST00000439235 CNTN2Q02246 1040 aa23.51■■□□□ 1.35
CHD3-204ENST00000439235 GRB14Q14449 540 aa23.51■■□□□ 1.35
CHD3-204ENST00000439235 PGM5Q15124 567 aa23.51■■□□□ 1.35
CHD3-204ENST00000439235 PTPAQ15257 358 aa23.51■■□□□ 1.35
CHD3-204ENST00000439235 TMEM87AQ8NBN3 555 aa23.51■■□□□ 1.35
CHD3-204ENST00000439235 IWS1Q96ST2 819 aa23.51■■□□□ 1.35
CHD3-204ENST00000439235 GDPD2Q9HCC8 539 aa23.51■■□□□ 1.35
CHD3-204ENST00000439235 SAGE1Q9NXZ1 904 aa23.51■■□□□ 1.35
CHD3-204ENST00000439235 DDX25Q9UHL0 483 aaKnown RBP23.51■■□□□ 1.35
CHD3-204ENST00000439235 ELP1O95163 1332 aa23.51■■□□□ 1.35
CHD3-204ENST00000439235 ZNF236Q9UL36 1845 aa23.5■■□□□ 1.35
CHD3-204ENST00000439235 LOC102724159A0A0B4J2E5 919 aa23.5■■□□□ 1.35
CHD3-204ENST00000439235 DDX11L8A8MPP1 907 aa23.5■■□□□ 1.35
CHD3-204ENST00000439235 SPTLC2O15270 562 aa23.5■■□□□ 1.35
CHD3-204ENST00000439235 TRPA1O75762 1119 aa23.5■■□□□ 1.35
CHD3-204ENST00000439235 ADORA2AP29274 412 aa23.5■■□□□ 1.35
CHD3-204ENST00000439235 ALDH5A1P51649 535 aaPredicted RBP23.5■■□□□ 1.35
CHD3-204ENST00000439235 PWP2Q15269 919 aaKnown RBP23.5■■□□□ 1.35
CHD3-204ENST00000439235 MBOAT7Q96N66 472 aa23.5■■□□□ 1.35
CHD3-204ENST00000439235 PURBQ96QR8 312 aaKnown RBP23.5■■□□□ 1.35
CHD3-204ENST00000439235 EDIL3O43854 480 aa23.49■■□□□ 1.35
CHD3-204ENST00000439235 PPP6R2O75170 966 aa23.49■■□□□ 1.35
CHD3-204ENST00000439235 TBC1D8O95759 1140 aa23.49■■□□□ 1.35
CHD3-204ENST00000439235 PGK2P07205 417 aa23.49■■□□□ 1.35
CHD3-204ENST00000439235 MCM4P33991 863 aa23.49■■□□□ 1.35
CHD3-204ENST00000439235 ATP2C1P98194 919 aaPredicted RBP23.49■■□□□ 1.35
CHD3-204ENST00000439235 SLC5A4Q9NY91 659 aa23.49■■□□□ 1.35
CHD3-204ENST00000439235 PLXNB2O15031 1838 aa23.49■■□□□ 1.35
CHD3-204ENST00000439235 SOWAHBA6NEL2 793 aa23.48■■□□□ 1.35
CHD3-204ENST00000439235 TNPO2O14787 897 aaKnown RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms