RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 RBM28Q9NW13 759 aaKnown RBP28.61■■■□□ 2.17
RAPGEF1-206ENST00000438647 COLQQ9Y215 455 aaPredicted RBP28.61■■■□□ 2.17
RAPGEF1-206ENST00000438647 ATP11BQ9Y2G3 1177 aa28.61■■■□□ 2.17
RAPGEF1-206ENST00000438647 GCOM1H8Y6P7 765 aaPredicted RBP28.6■■■□□ 2.17
RAPGEF1-206ENST00000438647 ZBTB43O43298 467 aa28.6■■■□□ 2.17
RAPGEF1-206ENST00000438647 POLR2MP0CAP2 368 aa28.6■■■□□ 2.17
RAPGEF1-206ENST00000438647 TMTC3Q6ZXV5 915 aa28.6■■■□□ 2.17
RAPGEF1-206ENST00000438647 RAB11FIP4Q86YS3 637 aa28.6■■■□□ 2.17
RAPGEF1-206ENST00000438647 SCFD2Q8WU76 684 aa28.6■■■□□ 2.17
RAPGEF1-206ENST00000438647 DYNC1LI2O43237 492 aaPredicted RBP28.59■■■□□ 2.17
RAPGEF1-206ENST00000438647 ZEB2O60315 1214 aa28.59■■■□□ 2.17
RAPGEF1-206ENST00000438647 ASGR1P07306 291 aa28.59■■■□□ 2.17
RAPGEF1-206ENST00000438647 RCAN1P53805 252 aa28.59■■■□□ 2.17
RAPGEF1-206ENST00000438647 PPP2R5BQ15173 497 aa28.59■■■□□ 2.17
RAPGEF1-206ENST00000438647 STXBP2Q15833 593 aa28.59■■■□□ 2.17
RAPGEF1-206ENST00000438647 PXMP2Q9NR77 195 aa28.59■■■□□ 2.17
RAPGEF1-206ENST00000438647 PRKAG2Q9UGJ0 569 aa28.59■■■□□ 2.17
RAPGEF1-206ENST00000438647 NKRFO15226 690 aaKnown RBP eCLIP28.58■■■□□ 2.17
RAPGEF1-206ENST00000438647 SYN1P17600 705 aa28.58■■■□□ 2.17
RAPGEF1-206ENST00000438647 FSCN1Q16658 493 aaKnown RBP28.58■■■□□ 2.17
RAPGEF1-206ENST00000438647 TRIM60Q495X7 471 aa28.58■■■□□ 2.17
RAPGEF1-206ENST00000438647 ELP1O95163 1332 aa28.58■■■□□ 2.17
RAPGEF1-206ENST00000438647 KLF18A0A0U1RQI7 1052 aa28.57■■■□□ 2.16
RAPGEF1-206ENST00000438647 EIF2AK2P19525 551 aaKnown RBP28.57■■■□□ 2.16
RAPGEF1-206ENST00000438647 TTLL4Q14679 1199 aa28.57■■■□□ 2.16
RAPGEF1-206ENST00000438647 RTN1Q16799 776 aa28.57■■■□□ 2.16
RAPGEF1-206ENST00000438647 CMTR1Q8N1G2 835 aaKnown RBP28.57■■■□□ 2.16
RAPGEF1-206ENST00000438647 BRPF3Q9ULD4 1205 aa28.57■■■□□ 2.16
RAPGEF1-206ENST00000438647 CTAGE5O15320 804 aa28.56■■■□□ 2.16
RAPGEF1-206ENST00000438647 HOXA13P31271 388 aaPredicted RBP28.56■■■□□ 2.16
RAPGEF1-206ENST00000438647 IRX5P78411 483 aaPredicted RBP28.56■■■□□ 2.16
RAPGEF1-206ENST00000438647 HABP4Q5JVS0 413 aaKnown RBP28.56■■■□□ 2.16
RAPGEF1-206ENST00000438647 USP26Q9BXU7 913 aa28.56■■■□□ 2.16
RAPGEF1-206ENST00000438647 CABYRO75952 493 aa28.55■■■□□ 2.16
RAPGEF1-206ENST00000438647 NR3C2P08235 984 aa28.55■■■□□ 2.16
RAPGEF1-206ENST00000438647 CASTP20810 708 aaKnown RBP28.55■■■□□ 2.16
RAPGEF1-206ENST00000438647 RPS6KB1P23443 525 aa28.55■■■□□ 2.16
RAPGEF1-206ENST00000438647 BEX3Q00994 111 aa28.55■■■□□ 2.16
RAPGEF1-206ENST00000438647 Q6ZUG5 572 aa28.55■■■□□ 2.16
RAPGEF1-206ENST00000438647 FBXL16Q8N461 479 aa28.55■■■□□ 2.16
RAPGEF1-206ENST00000438647 CCDC82Q8N4S0 544 aa28.55■■■□□ 2.16
RAPGEF1-206ENST00000438647 VTI1AQ96AJ9 217 aa28.55■■■□□ 2.16
RAPGEF1-206ENST00000438647 GOLGA8AA7E2F4 631 aa28.54■■■□□ 2.16
RAPGEF1-206ENST00000438647 GOLGA8BA8MQT2 603 aa28.54■■■□□ 2.16
RAPGEF1-206ENST00000438647 EIF3JO75822 258 aaKnown RBP28.54■■■□□ 2.16
RAPGEF1-206ENST00000438647 TXNP10599 105 aaKnown RBP28.54■■■□□ 2.16
RAPGEF1-206ENST00000438647 CPA1P15085 419 aa28.54■■■□□ 2.16
RAPGEF1-206ENST00000438647 CPT1AP50416 773 aa28.54■■■□□ 2.16
RAPGEF1-206ENST00000438647 BRDTQ58F21 947 aaPredicted RBP28.54■■■□□ 2.16
RAPGEF1-206ENST00000438647 OR6J1Q8NGC5 347 aa28.54■■■□□ 2.16
RAPGEF1-206ENST00000438647 CUL5Q93034 780 aa28.54■■■□□ 2.16
RAPGEF1-206ENST00000438647 PDCD2LQ9BRP1 358 aa28.54■■■□□ 2.16
RAPGEF1-206ENST00000438647 PRO3102Q9H379 93 aa28.54■■■□□ 2.16
RAPGEF1-206ENST00000438647 NAP1L2Q9ULW6 460 aaPredicted RBP28.54■■■□□ 2.16
RAPGEF1-206ENST00000438647 MROH7Q68CQ1 1323 aa28.53■■■□□ 2.16
RAPGEF1-206ENST00000438647 A0A0U1RQG5 324 aaPredicted RBP28.53■■■□□ 2.16
RAPGEF1-206ENST00000438647 EIF5BO60841 1220 aaKnown RBP28.53■■■□□ 2.16
RAPGEF1-206ENST00000438647 TLE2Q04725 743 aa28.53■■■□□ 2.16
RAPGEF1-206ENST00000438647 TMEM63BQ5T3F8 832 aa28.53■■■□□ 2.16
RAPGEF1-206ENST00000438647 FCHSD1Q86WN1 690 aa28.53■■■□□ 2.16
RAPGEF1-206ENST00000438647 GDF15Q99988 308 aa28.53■■■□□ 2.16
RAPGEF1-206ENST00000438647 RBM27Q9P2N5 1060 aaKnown RBP28.53■■■□□ 2.16
RAPGEF1-206ENST00000438647 RANBP2P49792 3224 aaKnown RBP28.52■■■□□ 2.16
RAPGEF1-206ENST00000438647 CCDC196A0A1B0GTZ2 297 aa28.52■■■□□ 2.16
RAPGEF1-206ENST00000438647 A0A1W2PPC1 479 aa28.52■■■□□ 2.16
RAPGEF1-206ENST00000438647 MAGEA10P43363 369 aaPredicted RBP28.52■■■□□ 2.16
RAPGEF1-206ENST00000438647 SEPT14Q6ZU15 432 aa28.52■■■□□ 2.16
RAPGEF1-206ENST00000438647 BRF1Q92994 677 aa28.52■■■□□ 2.16
RAPGEF1-206ENST00000438647 TOX2Q96NM4 488 aa28.52■■■□□ 2.16
RAPGEF1-206ENST00000438647 LBHD1Q9BQE6 289 aaPredicted RBP28.52■■■□□ 2.16
RAPGEF1-206ENST00000438647 PRDM5Q9NQX1 630 aaPredicted RBP28.52■■■□□ 2.16
RAPGEF1-206ENST00000438647 PQBP1O60828 265 aaKnown RBP28.51■■■□□ 2.15
RAPGEF1-206ENST00000438647 PTGS1P23219 599 aa28.51■■■□□ 2.15
RAPGEF1-206ENST00000438647 BMP8BP34820 402 aa28.51■■■□□ 2.15
RAPGEF1-206ENST00000438647 METAP2P50579 478 aaKnown RBP eCLIP28.51■■■□□ 2.15
RAPGEF1-206ENST00000438647 ANKRD33Q7Z3H0 272 aa28.51■■■□□ 2.15
RAPGEF1-206ENST00000438647 SMARCC2Q8TAQ2 1214 aa28.51■■■□□ 2.15
RAPGEF1-206ENST00000438647 AGXT2Q9BYV1 514 aa28.51■■■□□ 2.15
RAPGEF1-206ENST00000438647 POLR3EQ9NVU0 708 aa28.51■■■□□ 2.15
RAPGEF1-206ENST00000438647 CNTNAP5Q8WYK1 1306 aa28.5■■■□□ 2.15
RAPGEF1-206ENST00000438647 DCDC2CA8MYV0 355 aa28.5■■■□□ 2.15
RAPGEF1-206ENST00000438647 PIK3CDO00329 1044 aa28.5■■■□□ 2.15
RAPGEF1-206ENST00000438647 CLTBP09497 229 aa28.5■■■□□ 2.15
RAPGEF1-206ENST00000438647 MYCLP12524 364 aaPredicted RBP28.5■■■□□ 2.15
RAPGEF1-206ENST00000438647 CCND2P30279 289 aa28.5■■■□□ 2.15
RAPGEF1-206ENST00000438647 APOBRQ0VD83 1088 aa28.5■■■□□ 2.15
RAPGEF1-206ENST00000438647 PGM5Q15124 567 aa28.5■■■□□ 2.15
RAPGEF1-206ENST00000438647 CXCL17Q6UXB2 119 aa28.5■■■□□ 2.15
RAPGEF1-206ENST00000438647 RUFY3Q7L099 469 aa28.5■■■□□ 2.15
RAPGEF1-206ENST00000438647 SEZ6LQ9BYH1 1024 aa28.5■■■□□ 2.15
RAPGEF1-206ENST00000438647 PDLIM7Q9NR12 457 aa28.5■■■□□ 2.15
RAPGEF1-206ENST00000438647 CCDC62Q6P9F0 684 aa28.49■■■□□ 2.15
RAPGEF1-206ENST00000438647 HEATR3Q7Z4Q2 680 aa28.49■■■□□ 2.15
RAPGEF1-206ENST00000438647 VSIG10LQ86VR7 867 aa28.49■■■□□ 2.15
RAPGEF1-206ENST00000438647 TM6SF1Q9BZW5 370 aa28.49■■■□□ 2.15
RAPGEF1-206ENST00000438647 ZSWIM6Q9HCJ5 1215 aa28.49■■■□□ 2.15
RAPGEF1-206ENST00000438647 CYP46A1Q9Y6A2 500 aa28.49■■■□□ 2.15
RAPGEF1-206ENST00000438647 MRVI1Q9Y6F6 885 aa28.49■■■□□ 2.15
RAPGEF1-206ENST00000438647 hCG_1642624A0A1W2PR95 340 aa28.48■■■□□ 2.15
RAPGEF1-206ENST00000438647 ARVCFO00192 962 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms