RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 LRRC63Q05C16 580 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 PTPROQ16827 1216 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 EMBQ6PCB8 327 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 USP17L2Q6R6M4 530 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 BRINP3Q76B58 766 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 MAP3K14Q99558 947 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 CHP1Q99653 195 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 PAIP2Q9BPZ3 127 aaKnown RBP7.36□□□□□ -1.23
CSDE1-205ENST00000438362 PHF20Q9BVI0 1012 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 METTL14Q9HCE5 456 aaKnown RBP7.36□□□□□ -1.23
CSDE1-205ENST00000438362 KCNK9Q9NPC2 374 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 DCP1AQ9NPI6 582 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-205ENST00000438362 HDAC6Q9UBN7 1215 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 COL4A3BPQ9Y5P4 624 aa7.36□□□□□ -1.23
CSDE1-205ENST00000438362 MYO5BQ9ULV0 1848 aa7.35□□□□□ -1.23
CSDE1-205ENST00000438362 PLA2G4AP47712 749 aa7.35□□□□□ -1.23
CSDE1-205ENST00000438362 SLC7A5Q01650 507 aa7.35□□□□□ -1.23
CSDE1-205ENST00000438362 PPP2R5EQ16537 467 aa7.35□□□□□ -1.23
CSDE1-205ENST00000438362 ALS2CLQ60I27 953 aa7.35□□□□□ -1.23
CSDE1-205ENST00000438362 PPP4R3AQ6IN85 833 aa7.35□□□□□ -1.23
CSDE1-205ENST00000438362 C8orf37Q96NL8 207 aa7.35□□□□□ -1.23
CSDE1-205ENST00000438362 PIGSQ96S52 555 aa7.35□□□□□ -1.23
CSDE1-205ENST00000438362 KIAA1024Q9UPX6 916 aa7.35□□□□□ -1.23
CSDE1-205ENST00000438362 FHOD1Q9Y613 1164 aa7.35□□□□□ -1.23
CSDE1-205ENST00000438362 EXOC3O60645 756 aa7.35□□□□□ -1.23
CSDE1-205ENST00000438362 PRDX5P30044 214 aa7.35□□□□□ -1.23
CSDE1-205ENST00000438362 HOXA7P31268 230 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-205ENST00000438362 SEMA3FQ13275 785 aa7.35□□□□□ -1.23
CSDE1-205ENST00000438362 CLUL1Q15846 466 aa7.35□□□□□ -1.23
CSDE1-205ENST00000438362 EXOC3L4Q17RC7 722 aa7.35□□□□□ -1.23
CSDE1-205ENST00000438362 DPP8Q6V1X1 898 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-205ENST00000438362 STIM2Q9P246 746 aa7.35□□□□□ -1.23
CSDE1-205ENST00000438362 LEMD3Q9Y2U8 911 aa7.35□□□□□ -1.23
CSDE1-205ENST00000438362 BZW2Q9Y6E2 419 aaKnown RBP7.35□□□□□ -1.23
CSDE1-205ENST00000438362 ARHGEF35A5YM69 484 aa7.35□□□□□ -1.23
CSDE1-205ENST00000438362 EIF3CLB5ME19 914 aaKnown RBP7.35□□□□□ -1.23
CSDE1-205ENST00000438362 FTCDO95954 541 aa7.35□□□□□ -1.23
CSDE1-205ENST00000438362 GYPCP04921 128 aa7.35□□□□□ -1.23
CSDE1-205ENST00000438362 ABCB4P21439 1286 aa7.35□□□□□ -1.23
CSDE1-205ENST00000438362 NR2F2P24468 414 aa7.35□□□□□ -1.23
CSDE1-205ENST00000438362 GTF2IP78347 998 aa7.35□□□□□ -1.23
CSDE1-205ENST00000438362 PSMD2Q13200 908 aa7.35□□□□□ -1.23
CSDE1-205ENST00000438362 ASPRV1Q53RT3 343 aa7.35□□□□□ -1.23
CSDE1-205ENST00000438362 SRBD1Q8N5C6 995 aaKnown RBP7.35□□□□□ -1.23
CSDE1-205ENST00000438362 EIF3CQ99613 913 aaKnown RBP7.35□□□□□ -1.23
CSDE1-205ENST00000438362 PRDM4Q9UKN5 801 aa7.35□□□□□ -1.23
CSDE1-205ENST00000438362 CAPN11Q9UMQ6 739 aa7.35□□□□□ -1.23
CSDE1-205ENST00000438362 SIGLEC1Q9BZZ2 1709 aa7.35□□□□□ -1.23
CSDE1-205ENST00000438362 PP2D1A8MPX8 630 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 UBE2Q2LH0YL09 131 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 hCG_1984214I3L0E3 225 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 TBC1D8O95759 1140 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 BCRP11274 1271 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 DESP17661 470 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 KCNB1Q14721 858 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 DIXDC1Q155Q3 683 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 USH1GQ495M9 461 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 PRR16Q569H4 304 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 GSTA5Q7RTV2 222 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 CCDC50Q8IVM0 306 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 SLFN12Q8IYM2 578 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 ZNF713Q8N859 430 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-205ENST00000438362 MINPP1Q9UNW1 487 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 ORC4O43929 436 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 ATP1A1P05023 1023 aaKnown RBP7.34□□□□□ -1.23
CSDE1-205ENST00000438362 SERPING1P05155 500 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 EEF2P13639 858 aaKnown RBP7.34□□□□□ -1.23
CSDE1-205ENST00000438362 GCFC2P16383 781 aaKnown RBP7.34□□□□□ -1.23
CSDE1-205ENST00000438362 ATP5DP30049 168 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 GJC1P36383 396 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 ARHGAP44Q17R89 818 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 DENND2CQ68D51 928 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 CLEC4GQ6UXB4 293 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 UNC13DQ70J99 1090 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 CACNA2D3Q8IZS8 1091 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 COG1Q8WTW3 980 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 COA7Q96BR5 231 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 DPH5Q9H2P9 285 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 PLCB1Q9NQ66 1216 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 ANKRD65E5RJM6 399 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 ATP2A1O14983 1001 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 ATP2B4P23634 1241 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 GGCXP38435 758 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 MAGEA9P43362 315 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 MRPS25P82663 173 aaKnown RBP7.34□□□□□ -1.23
CSDE1-205ENST00000438362 NNTQ13423 1086 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 NTRK3Q16288 839 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 TXNRD1Q16881 649 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 FAM98CQ17RN3 349 aaKnown RBP7.34□□□□□ -1.23
CSDE1-205ENST00000438362 ADSSL1Q8N142 457 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.34□□□□□ -1.236e-7■■■■■ 114.9
CSDE1-205ENST00000438362 USP40Q9NVE5 1235 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 NKIRAS1Q9NYS0 192 aa7.34□□□□□ -1.23
CSDE1-205ENST00000438362 TOB1P50616 345 aaPredicted RBP7.34□□□□□ -1.24
CSDE1-205ENST00000438362 SEPT2Q15019 361 aa7.34□□□□□ -1.24
CSDE1-205ENST00000438362 GPATCH4Q5T3I0 446 aaKnown RBP7.34□□□□□ -1.24
CSDE1-205ENST00000438362 MCTP2Q6DN12 878 aa7.34□□□□□ -1.24
CSDE1-205ENST00000438362 GSPT2Q8IYD1 628 aaKnown RBP7.34□□□□□ -1.24
CSDE1-205ENST00000438362 CCDC105Q8IYK2 499 aa7.34□□□□□ -1.24
CSDE1-205ENST00000438362 FAM133AQ8N9E0 248 aa7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms