RNA–Protein interactions for RNA: ENST00000436654.1

CTDSPL-205, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-205ENST00000436654 PURAQ00577 322 aaKnown RBP10.39□□□□□ -0.75
CTDSPL-205ENST00000436654 NBPF20Q3BBV1 942 aa10.39□□□□□ -0.75
CTDSPL-205ENST00000436654 IFIT1BQ5T764 474 aaKnown RBP10.39□□□□□ -0.75
CTDSPL-205ENST00000436654 RASIP1Q5U651 963 aa10.39□□□□□ -0.75
CTDSPL-205ENST00000436654 CYB5R4Q7L1T6 521 aa10.39□□□□□ -0.75
CTDSPL-205ENST00000436654 OTOP2Q7RTS6 562 aa10.39□□□□□ -0.75
CTDSPL-205ENST00000436654 FBXO11Q86XK2 927 aa10.39□□□□□ -0.75
CTDSPL-205ENST00000436654 STAG2Q8N3U4 1231 aa10.39□□□□□ -0.75
CTDSPL-205ENST00000436654 RGS22Q8NE09 1264 aa10.39□□□□□ -0.75
CTDSPL-205ENST00000436654 SYTL5Q8TDW5 730 aaPredicted RBP10.39□□□□□ -0.75
CTDSPL-205ENST00000436654 SCLYQ96I15 445 aa10.39□□□□□ -0.75
CTDSPL-205ENST00000436654 MTG1Q9BT17 334 aaPredicted RBP10.39□□□□□ -0.75
CTDSPL-205ENST00000436654 WNT8AQ9H1J5 351 aa10.39□□□□□ -0.75
CTDSPL-205ENST00000436654 JMJD4Q9H9V9 463 aa10.39□□□□□ -0.75
CTDSPL-205ENST00000436654 CXXC1Q9P0U4 656 aaPredicted RBP10.39□□□□□ -0.75
CTDSPL-205ENST00000436654 COL20A1Q9P218 1284 aa10.39□□□□□ -0.75
CTDSPL-205ENST00000436654 SMCHD1A6NHR9 2005 aa10.39□□□□□ -0.75
CTDSPL-205ENST00000436654 LRRC37A2A6NM11 1700 aa10.38□□□□□ -0.75
CTDSPL-205ENST00000436654 RAD50Q92878 1312 aa10.38□□□□□ -0.75
CTDSPL-205ENST00000436654 TMEM265A0A087WTH1 108 aa10.38□□□□□ -0.75
CTDSPL-205ENST00000436654 B4DLN1 442 aa10.38□□□□□ -0.75
CTDSPL-205ENST00000436654 NKRFO15226 690 aaKnown RBP eCLIP10.38□□□□□ -0.75
CTDSPL-205ENST00000436654 EIF2AK2P19525 551 aaKnown RBP10.38□□□□□ -0.75
CTDSPL-205ENST00000436654 MRPL12P52815 198 aaKnown RBP10.38□□□□□ -0.75
CTDSPL-205ENST00000436654 PTH1RQ03431 593 aa10.38□□□□□ -0.75
CTDSPL-205ENST00000436654 TTLL4Q14679 1199 aa10.38□□□□□ -0.75
CTDSPL-205ENST00000436654 BRDTQ58F21 947 aaPredicted RBP10.38□□□□□ -0.75
CTDSPL-205ENST00000436654 SEPT14Q6ZU15 432 aa10.38□□□□□ -0.75
CTDSPL-205ENST00000436654 CHST3Q7LGC8 479 aa10.38□□□□□ -0.75
CTDSPL-205ENST00000436654 HERVK_113Q902F9 699 aa10.38□□□□□ -0.75
CTDSPL-205ENST00000436654 RMDN3Q96TC7 470 aa10.38□□□□□ -0.75
CTDSPL-205ENST00000436654 SEZ6LQ9BYH1 1024 aa10.38□□□□□ -0.75
CTDSPL-205ENST00000436654 PBX4Q9BYU1 374 aa10.38□□□□□ -0.75
CTDSPL-205ENST00000436654 ZNF576Q9H609 170 aa10.38□□□□□ -0.75
CTDSPL-205ENST00000436654 MRPL11Q9Y3B7 192 aaKnown RBP10.38□□□□□ -0.75
CTDSPL-205ENST00000436654 A6NJR5 290 aa10.37□□□□□ -0.75
CTDSPL-205ENST00000436654 KLRF2D3W0D1 207 aa10.37□□□□□ -0.75
CTDSPL-205ENST00000436654 CFBP00751 764 aa10.37□□□□□ -0.75
CTDSPL-205ENST00000436654 SUPT20HL2P0C7V6 817 aa10.37□□□□□ -0.75
CTDSPL-205ENST00000436654 CHMLP26374 656 aa10.37□□□□□ -0.75
CTDSPL-205ENST00000436654 TRDNQ13061 729 aa10.37□□□□□ -0.75
CTDSPL-205ENST00000436654 SEC23AQ15436 765 aa10.37□□□□□ -0.75
CTDSPL-205ENST00000436654 LY6KQ17RY6 165 aa10.37□□□□□ -0.75
CTDSPL-205ENST00000436654 ARHGEF16Q5VV41 709 aa10.37□□□□□ -0.75
CTDSPL-205ENST00000436654 MCF2L2Q86YR7 1114 aa10.37□□□□□ -0.75
CTDSPL-205ENST00000436654 NSUN6Q8TEA1 469 aaKnown RBP10.37□□□□□ -0.75
CTDSPL-205ENST00000436654 AFG1LQ8WV93 481 aa10.37□□□□□ -0.75
CTDSPL-205ENST00000436654 SYMPKQ92797 1274 aaKnown RBP10.37□□□□□ -0.75
CTDSPL-205ENST00000436654 MTIF3Q9H2K0 278 aaKnown RBP10.37□□□□□ -0.75
CTDSPL-205ENST00000436654 TAF6LQ9Y6J9 622 aa10.37□□□□□ -0.75
CTDSPL-205ENST00000436654 ZBBXA8MT70 800 aa10.36□□□□□ -0.75
CTDSPL-205ENST00000436654 IFIT3O14879 490 aaKnown RBP10.36□□□□□ -0.75
CTDSPL-205ENST00000436654 PPP1R11O60927 126 aaPredicted RBP10.36□□□□□ -0.75
CTDSPL-205ENST00000436654 GH1P01241 217 aa10.36□□□□□ -0.75
CTDSPL-205ENST00000436654 CYP21A2P08686 494 aa10.36□□□□□ -0.75
CTDSPL-205ENST00000436654 PLA2G5P39877 138 aa10.36□□□□□ -0.75
CTDSPL-205ENST00000436654 STXBP2Q15833 593 aa10.36□□□□□ -0.75
CTDSPL-205ENST00000436654 CCDC62Q6P9F0 684 aa10.36□□□□□ -0.75
CTDSPL-205ENST00000436654 DEFB128Q7Z7B8 93 aa10.36□□□□□ -0.75
CTDSPL-205ENST00000436654 HOMER1Q86YM7 354 aa10.36□□□□□ -0.75
CTDSPL-205ENST00000436654 RPUSD2Q8IZ73 545 aaKnown RBP10.36□□□□□ -0.75
CTDSPL-205ENST00000436654 RUFY2Q8WXA3 655 aa10.36□□□□□ -0.75
CTDSPL-205ENST00000436654 VWCEQ96DN2 955 aa10.36□□□□□ -0.75
CTDSPL-205ENST00000436654 AMNQ9BXJ7 453 aa10.36□□□□□ -0.75
CTDSPL-205ENST00000436654 NKX2-4Q9H2Z4 354 aa10.36□□□□□ -0.75
CTDSPL-205ENST00000436654 PRDM12Q9H4Q4 367 aa10.36□□□□□ -0.75
CTDSPL-205ENST00000436654 SENP2Q9HC62 589 aa10.36□□□□□ -0.75
CTDSPL-205ENST00000436654 MAD2L2Q9UI95 211 aa10.36□□□□□ -0.75
CTDSPL-205ENST00000436654 MSRAQ9UJ68 235 aa10.36□□□□□ -0.75
CTDSPL-205ENST00000436654 YBX2Q9Y2T7 364 aaKnown RBP10.36□□□□□ -0.75
CTDSPL-205ENST00000436654 EYSQ5T1H1 3165 aa10.36□□□□□ -0.75
CTDSPL-205ENST00000436654 PALM3A6NDB9 673 aaPredicted RBP10.35□□□□□ -0.75
CTDSPL-205ENST00000436654 OPLAHO14841 1288 aa10.35□□□□□ -0.75
CTDSPL-205ENST00000436654 ZBTB5O15062 677 aa10.35□□□□□ -0.75
CTDSPL-205ENST00000436654 SORBS3O60504 671 aa10.35□□□□□ -0.75
CTDSPL-205ENST00000436654 KPNA6O60684 536 aa10.35□□□□□ -0.75
CTDSPL-205ENST00000436654 NR3C2P08235 984 aa10.35□□□□□ -0.75
CTDSPL-205ENST00000436654 MMP3P08254 477 aa10.35□□□□□ -0.75
CTDSPL-205ENST00000436654 MYCLP12524 364 aaPredicted RBP10.35□□□□□ -0.75
CTDSPL-205ENST00000436654 HOXA13P31271 388 aaPredicted RBP10.35□□□□□ -0.75
CTDSPL-205ENST00000436654 RABGGTBP53611 331 aa10.35□□□□□ -0.75
CTDSPL-205ENST00000436654 ARHGAP1Q07960 439 aa10.35□□□□□ -0.75
CTDSPL-205ENST00000436654 RAB30Q15771 203 aa10.35□□□□□ -0.75
CTDSPL-205ENST00000436654 SLC35G1Q2M3R5 365 aa10.35□□□□□ -0.75
CTDSPL-205ENST00000436654 NFRKBQ6P4R8 1299 aa10.35□□□□□ -0.75
CTDSPL-205ENST00000436654 RALYLQ86SE5 291 aaKnown RBP10.35□□□□□ -0.75
CTDSPL-205ENST00000436654 USP38Q8NB14 1042 aa10.35□□□□□ -0.75
CTDSPL-205ENST00000436654 PIBF1Q8WXW3 757 aa10.35□□□□□ -0.75
CTDSPL-205ENST00000436654 PPM1EQ8WY54 764 aa10.35□□□□□ -0.75
CTDSPL-205ENST00000436654 IWS1Q96ST2 819 aa10.35□□□□□ -0.75
CTDSPL-205ENST00000436654 PXMP2Q9NR77 195 aa10.35□□□□□ -0.75
CTDSPL-205ENST00000436654 NOD1Q9Y239 953 aa10.35□□□□□ -0.75
CTDSPL-205ENST00000436654 PCDHA1Q9Y5I3 950 aa10.35□□□□□ -0.75
CTDSPL-205ENST00000436654 SLC4A7Q9Y6M7 1214 aa10.35□□□□□ -0.75
CTDSPL-205ENST00000436654 U3KPZ7 1027 aaPredicted RBP10.35□□□□□ -0.75
CTDSPL-205ENST00000436654 MCM3APO60318 1980 aa10.34□□□□□ -0.75
CTDSPL-205ENST00000436654 ERICH2A1L162 156 aa10.34□□□□□ -0.75
CTDSPL-205ENST00000436654 E7EWF7 191 aa10.34□□□□□ -0.75
CTDSPL-205ENST00000436654 SGSM2O43147 1006 aa10.34□□□□□ -0.75
CTDSPL-205ENST00000436654 MYOGP15173 224 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms