RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 RABGGTBP53611 331 aa12.85□□□□□ -0.35
SPTLC1P4-201ENST00000435997 PDE4DQ08499 809 aa12.85□□□□□ -0.35
SPTLC1P4-201ENST00000435997 AAMPQ13685 434 aa12.85□□□□□ -0.35
SPTLC1P4-201ENST00000435997 COPS5Q92905 334 aa12.85□□□□□ -0.35
SPTLC1P4-201ENST00000435997 CTAGE1Q96RT6 745 aa12.85□□□□□ -0.35
SPTLC1P4-201ENST00000435997 COL20A1Q9P218 1284 aa12.85□□□□□ -0.35
SPTLC1P4-201ENST00000435997 THEGQ9P2T0 379 aa12.85□□□□□ -0.35
SPTLC1P4-201ENST00000435997 PCDHA11Q9Y5I1 949 aa12.85□□□□□ -0.35
SPTLC1P4-201ENST00000435997 SLC4A7Q9Y6M7 1214 aa12.85□□□□□ -0.35
SPTLC1P4-201ENST00000435997 KPNA6O60684 536 aa12.84□□□□□ -0.35
SPTLC1P4-201ENST00000435997 MYL3P08590 195 aa12.84□□□□□ -0.35
SPTLC1P4-201ENST00000435997 MYOGP15173 224 aa12.84□□□□□ -0.35
SPTLC1P4-201ENST00000435997 ATP2A2P16615 1042 aaKnown RBP12.84□□□□□ -0.35
SPTLC1P4-201ENST00000435997 RFC2P35250 354 aa12.84□□□□□ -0.35
SPTLC1P4-201ENST00000435997 PTPN11Q06124 597 aaPredicted RBP12.84□□□□□ -0.35
SPTLC1P4-201ENST00000435997 CDC37Q16543 378 aaPredicted RBP12.84□□□□□ -0.35
SPTLC1P4-201ENST00000435997 NBPF20Q3BBV1 942 aa12.84□□□□□ -0.35
SPTLC1P4-201ENST00000435997 PPP2R2DQ66LE6 453 aa12.84□□□□□ -0.35
SPTLC1P4-201ENST00000435997 SESTD1Q86VW0 696 aa12.84□□□□□ -0.35
SPTLC1P4-201ENST00000435997 PLEKHM2Q8IWE5 1019 aa12.84□□□□□ -0.35
SPTLC1P4-201ENST00000435997 SP7Q8TDD2 431 aaPredicted RBP12.84□□□□□ -0.35
SPTLC1P4-201ENST00000435997 SYTL5Q8TDW5 730 aaPredicted RBP12.84□□□□□ -0.35
SPTLC1P4-201ENST00000435997 MPHOSPH6Q99547 160 aaKnown RBP12.84□□□□□ -0.35
SPTLC1P4-201ENST00000435997 CPVLQ9H3G5 476 aa12.84□□□□□ -0.35
SPTLC1P4-201ENST00000435997 SLC28A3Q9HAS3 691 aa12.84□□□□□ -0.35
SPTLC1P4-201ENST00000435997 LAMA4Q16363 1823 aa12.83□□□□□ -0.35
SPTLC1P4-201ENST00000435997 TRIM6-TRIM34B2RNG4 842 aa12.83□□□□□ -0.36
SPTLC1P4-201ENST00000435997 MMP3P08254 477 aa12.83□□□□□ -0.36
SPTLC1P4-201ENST00000435997 IQCF3P0C7M6 154 aa12.83□□□□□ -0.36
SPTLC1P4-201ENST00000435997 GOLGA8HP0CJ92 632 aa12.83□□□□□ -0.36
SPTLC1P4-201ENST00000435997 MFAP1P55081 439 aaKnown RBP12.83□□□□□ -0.36
SPTLC1P4-201ENST00000435997 GHRHRQ02643 423 aa12.83□□□□□ -0.36
SPTLC1P4-201ENST00000435997 RBL2Q08999 1139 aa12.83□□□□□ -0.36
SPTLC1P4-201ENST00000435997 USH1GQ495M9 461 aa12.83□□□□□ -0.36
SPTLC1P4-201ENST00000435997 ASPRV1Q53RT3 343 aa12.83□□□□□ -0.36
SPTLC1P4-201ENST00000435997 BRDTQ58F21 947 aaPredicted RBP12.83□□□□□ -0.36
SPTLC1P4-201ENST00000435997 CHD1LQ86WJ1 897 aa12.83□□□□□ -0.36
SPTLC1P4-201ENST00000435997 ENAHQ8N8S7 591 aaPredicted RBP12.83□□□□□ -0.36
SPTLC1P4-201ENST00000435997 PNMA1Q8ND90 353 aa12.83□□□□□ -0.36
SPTLC1P4-201ENST00000435997 ASB2Q96Q27 587 aa12.83□□□□□ -0.36
SPTLC1P4-201ENST00000435997 ZKSCAN3Q9BRR0 538 aa12.83□□□□□ -0.36
SPTLC1P4-201ENST00000435997 ABCB11O95342 1321 aa12.83□□□□□ -0.36
SPTLC1P4-201ENST00000435997 TANC1Q9C0D5 1861 aa12.82□□□□□ -0.36
SPTLC1P4-201ENST00000435997 TNFRSF10AO00220 468 aa12.82□□□□□ -0.36
SPTLC1P4-201ENST00000435997 KDM4AO75164 1064 aa12.82□□□□□ -0.36
SPTLC1P4-201ENST00000435997 TXNP10599 105 aaKnown RBP12.82□□□□□ -0.36
SPTLC1P4-201ENST00000435997 POU3F3P20264 500 aaPredicted RBP12.82□□□□□ -0.36
SPTLC1P4-201ENST00000435997 NUCB1Q02818 461 aa12.82□□□□□ -0.36
SPTLC1P4-201ENST00000435997 ARHGAP1Q07960 439 aa12.82□□□□□ -0.36
SPTLC1P4-201ENST00000435997 CCDC178Q5BJE1 867 aa12.82□□□□□ -0.36
SPTLC1P4-201ENST00000435997 IQCA1Q86XH1 822 aa12.82□□□□□ -0.36
SPTLC1P4-201ENST00000435997 ADGRF4Q8IZF3 695 aa12.82□□□□□ -0.36
SPTLC1P4-201ENST00000435997 PHOSPHO2Q8TCD6 241 aa12.82□□□□□ -0.36
SPTLC1P4-201ENST00000435997 KAT2BQ92831 832 aa12.82□□□□□ -0.36
SPTLC1P4-201ENST00000435997 EMID1Q96A84 441 aaPredicted RBP12.82□□□□□ -0.36
SPTLC1P4-201ENST00000435997 ZSCAN10Q96SZ4 725 aaPredicted RBP12.82□□□□□ -0.36
SPTLC1P4-201ENST00000435997 SLC9A7Q96T83 725 aa12.82□□□□□ -0.36
SPTLC1P4-201ENST00000435997 DSCC1Q9BVC3 393 aa12.82□□□□□ -0.36
SPTLC1P4-201ENST00000435997 UBA5Q9GZZ9 404 aa12.82□□□□□ -0.36
SPTLC1P4-201ENST00000435997 GPHNQ9NQX3 736 aaPredicted RBP12.82□□□□□ -0.36
SPTLC1P4-201ENST00000435997 ZBBXA8MT70 800 aa12.81□□□□□ -0.36
SPTLC1P4-201ENST00000435997 B4DLN1 442 aa12.81□□□□□ -0.36
SPTLC1P4-201ENST00000435997 B4E1Z4 1266 aa12.81□□□□□ -0.36
SPTLC1P4-201ENST00000435997 ZNF213O14771 459 aa12.81□□□□□ -0.36
SPTLC1P4-201ENST00000435997 OPLAHO14841 1288 aa12.81□□□□□ -0.36
SPTLC1P4-201ENST00000435997 ARHGEF15O94989 841 aa12.81□□□□□ -0.36
SPTLC1P4-201ENST00000435997 CA3P07451 260 aa12.81□□□□□ -0.36
SPTLC1P4-201ENST00000435997 HOXD8P13378 290 aaPredicted RBP12.81□□□□□ -0.36
SPTLC1P4-201ENST00000435997 MRPL12P52815 198 aaKnown RBP12.81□□□□□ -0.36
SPTLC1P4-201ENST00000435997 GPNMBQ14956 572 aa12.81□□□□□ -0.36
SPTLC1P4-201ENST00000435997 QRICH1Q2TAL8 776 aa12.81□□□□□ -0.36
SPTLC1P4-201ENST00000435997 FAM47CQ5HY64 1035 aa12.81□□□□□ -0.36
SPTLC1P4-201ENST00000435997 DEFB128Q7Z7B8 93 aa12.81□□□□□ -0.36
SPTLC1P4-201ENST00000435997 CAGE1Q8TC20 777 aa12.81□□□□□ -0.36
SPTLC1P4-201ENST00000435997 NSUN6Q8TEA1 469 aaKnown RBP12.81□□□□□ -0.36
SPTLC1P4-201ENST00000435997 PPP1R13LQ8WUF5 828 aa12.81□□□□□ -0.36
SPTLC1P4-201ENST00000435997 AFG1LQ8WV93 481 aa12.81□□□□□ -0.36
SPTLC1P4-201ENST00000435997 TBC1D5Q92609 795 aa12.81□□□□□ -0.36
SPTLC1P4-201ENST00000435997 RILPL2Q969X0 211 aa12.81□□□□□ -0.36
SPTLC1P4-201ENST00000435997 MTMR8Q96EF0 704 aa12.81□□□□□ -0.36
SPTLC1P4-201ENST00000435997 IWS1Q96ST2 819 aa12.81□□□□□ -0.36
SPTLC1P4-201ENST00000435997 EPOPA6NHQ4 379 aa12.8□□□□□ -0.36
SPTLC1P4-201ENST00000435997 BAIAP3O94812 1187 aa12.8□□□□□ -0.36
SPTLC1P4-201ENST00000435997 GH1P01241 217 aa12.8□□□□□ -0.36
SPTLC1P4-201ENST00000435997 IGFBP4P22692 258 aa12.8□□□□□ -0.36
SPTLC1P4-201ENST00000435997 HSD17B4P51659 736 aa12.8□□□□□ -0.36
SPTLC1P4-201ENST00000435997 MRPS5P82675 430 aaKnown RBP12.8□□□□□ -0.36
SPTLC1P4-201ENST00000435997 BFSP2Q13515 415 aa12.8□□□□□ -0.36
SPTLC1P4-201ENST00000435997 TMEM67Q5HYA8 995 aa12.8□□□□□ -0.36
SPTLC1P4-201ENST00000435997 CWC27Q6UX04 472 aaKnown RBP12.8□□□□□ -0.36
SPTLC1P4-201ENST00000435997 MCF2L2Q86YR7 1114 aa12.8□□□□□ -0.36
SPTLC1P4-201ENST00000435997 ADAMTS19Q8TE59 1207 aa12.8□□□□□ -0.36
SPTLC1P4-201ENST00000435997 AFAP1L1Q8TED9 768 aa12.8□□□□□ -0.36
SPTLC1P4-201ENST00000435997 PPM1EQ8WY54 764 aa12.8□□□□□ -0.36
SPTLC1P4-201ENST00000435997 DHX38Q92620 1227 aaKnown RBP12.8□□□□□ -0.36
SPTLC1P4-201ENST00000435997 TAAR1Q96RJ0 339 aa12.8□□□□□ -0.36
SPTLC1P4-201ENST00000435997 IL25Q9H293 177 aa12.8□□□□□ -0.36
SPTLC1P4-201ENST00000435997 KAT14Q9H8E8 782 aa12.8□□□□□ -0.36
SPTLC1P4-201ENST00000435997 JMJD4Q9H9V9 463 aa12.8□□□□□ -0.36
SPTLC1P4-201ENST00000435997 ZSWIM5Q9P217 1185 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms