RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 PI4K2BQ8TCG2 481 aa8.1□□□□□ -1.11
USP54-206ENST00000433394 IFT22Q9H7X7 185 aa8.1□□□□□ -1.11
USP54-206ENST00000433394 SEMA3GQ9NS98 782 aa8.1□□□□□ -1.11
USP54-206ENST00000433394 KLHL42Q9P2K6 505 aa8.1□□□□□ -1.11
USP54-206ENST00000433394 VAV3Q9UKW4 847 aa8.1□□□□□ -1.11
USP54-206ENST00000433394 ARVCFO00192 962 aa8.09□□□□□ -1.11
USP54-206ENST00000433394 IGHA1P01876 353 aa8.09□□□□□ -1.11
USP54-206ENST00000433394 SOD2P04179 222 aa8.09□□□□□ -1.11
USP54-206ENST00000433394 CDKN1CP49918 316 aaPredicted RBP8.09□□□□□ -1.11
USP54-206ENST00000433394 IL2P60568 153 aa8.09□□□□□ -1.11
USP54-206ENST00000433394 CYP4F3Q08477 520 aa8.09□□□□□ -1.11
USP54-206ENST00000433394 DOC2BQ14184 412 aa8.09□□□□□ -1.11
USP54-206ENST00000433394 PCBP1Q15365 356 aaKnown RBP eCLIP8.09□□□□□ -1.11
USP54-206ENST00000433394 AOC3Q16853 763 aa8.09□□□□□ -1.11
USP54-206ENST00000433394 RGL3Q3MIN7 710 aa8.09□□□□□ -1.11
USP54-206ENST00000433394 PLA2G4EQ3MJ16 856 aa8.09□□□□□ -1.11
USP54-206ENST00000433394 CPNE8Q86YQ8 564 aa8.09□□□□□ -1.11
USP54-206ENST00000433394 IGSF22Q8N9C0 903 aa8.09□□□□□ -1.11
USP54-206ENST00000433394 RCBTB1Q8NDN9 531 aa8.09□□□□□ -1.11
USP54-206ENST00000433394 FBXW5Q969U6 566 aa8.09□□□□□ -1.11
USP54-206ENST00000433394 ATP13A1Q9HD20 1204 aa8.09□□□□□ -1.11
USP54-206ENST00000433394 CATSPERZQ9NTU4 200 aa8.09□□□□□ -1.11
USP54-206ENST00000433394 PLAGL2Q9UPG8 496 aa8.09□□□□□ -1.11
USP54-206ENST00000433394 APOBEC2Q9Y235 224 aaKnown RBP8.09□□□□□ -1.11
USP54-206ENST00000433394 PYGMP11217 842 aa8.08□□□□□ -1.12
USP54-206ENST00000433394 GRK2P25098 689 aa8.08□□□□□ -1.12
USP54-206ENST00000433394 GRK3P35626 688 aa8.08□□□□□ -1.12
USP54-206ENST00000433394 PRKCQQ04759 706 aa8.08□□□□□ -1.12
USP54-206ENST00000433394 IKZF1Q13422 519 aa8.08□□□□□ -1.12
USP54-206ENST00000433394 CRY1Q16526 586 aa8.08□□□□□ -1.12
USP54-206ENST00000433394 HSP90AB2PQ58FF8 381 aa8.08□□□□□ -1.12
USP54-206ENST00000433394 NOL8Q76FK4 1167 aaKnown RBP8.08□□□□□ -1.12
USP54-206ENST00000433394 CCDC120Q96HB5 630 aa8.08□□□□□ -1.12
USP54-206ENST00000433394 CELF4Q9BZC1 486 aaKnown RBP8.08□□□□□ -1.12
USP54-206ENST00000433394 SLC5A4Q9NY91 659 aa8.08□□□□□ -1.12
USP54-206ENST00000433394 TNFRSF10DQ9UBN6 386 aa8.08□□□□□ -1.12
USP54-206ENST00000433394 ZC3H7BQ9UGR2 993 aaKnown RBP8.08□□□□□ -1.12
USP54-206ENST00000433394 TMEFF2Q9UIK5 374 aaPredicted RBP8.08□□□□□ -1.12
USP54-206ENST00000433394 COA3Q9Y2R0 106 aaPredicted RBP8.08□□□□□ -1.12
USP54-206ENST00000433394 DNM2P50570 870 aa8.07□□□□□ -1.12
USP54-206ENST00000433394 EVA1CP58658 441 aa8.07□□□□□ -1.12
USP54-206ENST00000433394 TEKQ02763 1124 aa8.07□□□□□ -1.12
USP54-206ENST00000433394 ARHGAP44Q17R89 818 aa8.07□□□□□ -1.12
USP54-206ENST00000433394 SPATS2Q86XZ4 545 aaKnown RBP8.07□□□□□ -1.12
USP54-206ENST00000433394 CCDC103Q8IW40 242 aa8.07□□□□□ -1.12
USP54-206ENST00000433394 JDP2Q8WYK2 163 aa8.07□□□□□ -1.12
USP54-206ENST00000433394 TMEM169Q96HH4 297 aa8.07□□□□□ -1.12
USP54-206ENST00000433394 SCYL1Q96KG9 808 aa8.07□□□□□ -1.12
USP54-206ENST00000433394 ORAI3Q9BRQ5 295 aa8.07□□□□□ -1.12
USP54-206ENST00000433394 PCGF6Q9BYE7 350 aa8.07□□□□□ -1.12
USP54-206ENST00000433394 BTG4Q9NY30 223 aa8.07□□□□□ -1.12
USP54-206ENST00000433394 CLDND1Q9NY35 253 aa8.07□□□□□ -1.12
USP54-206ENST00000433394 NUB1Q9Y5A7 615 aa8.07□□□□□ -1.12
USP54-206ENST00000433394 A0A1W2PQJ5 194 aa8.06□□□□□ -1.12
USP54-206ENST00000433394 WASH4PA8MWX3 477 aa8.06□□□□□ -1.12
USP54-206ENST00000433394 M0R2C6 588 aa8.06□□□□□ -1.12
USP54-206ENST00000433394 LCP1P13796 627 aa8.06□□□□□ -1.12
USP54-206ENST00000433394 SPIRE1Q08AE8 756 aa8.06□□□□□ -1.12
USP54-206ENST00000433394 FAPQ12884 760 aa8.06□□□□□ -1.12
USP54-206ENST00000433394 BRDTQ58F21 947 aaPredicted RBP8.06□□□□□ -1.12
USP54-206ENST00000433394 CCDC181Q5TID7 509 aa8.06□□□□□ -1.12
USP54-206ENST00000433394 ANGEL2Q5VTE6 544 aaKnown RBP8.06□□□□□ -1.12
USP54-206ENST00000433394 INTS5Q6P9B9 1019 aaKnown RBP8.06□□□□□ -1.12
USP54-206ENST00000433394 C16orf59Q7L2K0 433 aa8.06□□□□□ -1.12
USP54-206ENST00000433394 ZDHHC13Q8IUH4 622 aa8.06□□□□□ -1.12
USP54-206ENST00000433394 C2orf69Q8N8R5 385 aa8.06□□□□□ -1.12
USP54-206ENST00000433394 USP33Q8TEY7 942 aa8.06□□□□□ -1.12
USP54-206ENST00000433394 TRMT2BQ96GJ1 504 aaKnown RBP8.06□□□□□ -1.12
USP54-206ENST00000433394 ERVK13-1Q9NX77 482 aa8.06□□□□□ -1.12
USP54-206ENST00000433394 LMCD1Q9NZU5 365 aa8.06□□□□□ -1.12
USP54-206ENST00000433394 G3BP2Q9UN86 482 aaKnown RBP8.06□□□□□ -1.12
USP54-206ENST00000433394 COQ6Q9Y2Z9 468 aa8.06□□□□□ -1.12
USP54-206ENST00000433394 CCDC66A2RUB6 948 aa8.05□□□□□ -1.12
USP54-206ENST00000433394 C7orf72A4D263 438 aa8.05□□□□□ -1.12
USP54-206ENST00000433394 H7BY64 318 aa8.05□□□□□ -1.12
USP54-206ENST00000433394 CBX4O00257 560 aa8.05□□□□□ -1.12
USP54-206ENST00000433394 GPR39O43194 453 aa8.05□□□□□ -1.12
USP54-206ENST00000433394 GLRX3O76003 335 aaKnown RBP8.05□□□□□ -1.12
USP54-206ENST00000433394 TMPRSS15P98073 1019 aa8.05□□□□□ -1.12
USP54-206ENST00000433394 ITKQ08881 620 aa8.05□□□□□ -1.12
USP54-206ENST00000433394 STAT4Q14765 748 aa8.05□□□□□ -1.12
USP54-206ENST00000433394 TMEM177Q53S58 311 aa8.05□□□□□ -1.12
USP54-206ENST00000433394 STRA8Q7Z7C7 330 aa8.05□□□□□ -1.12
USP54-206ENST00000433394 PASD1Q8IV76 773 aa8.05□□□□□ -1.12
USP54-206ENST00000433394 CHST14Q8NCH0 376 aa8.05□□□□□ -1.12
USP54-206ENST00000433394 PCDH19Q8TAB3 1148 aa8.05□□□□□ -1.12
USP54-206ENST00000433394 STAG1Q8WVM7 1258 aa8.05□□□□□ -1.12
USP54-206ENST00000433394 MTFR1LQ9H019 292 aa8.05□□□□□ -1.12
USP54-206ENST00000433394 PUS7LQ9H0K6 701 aaKnown RBP8.05□□□□□ -1.12
USP54-206ENST00000433394 IPPKQ9H8X2 491 aa8.05□□□□□ -1.12
USP54-206ENST00000433394 BSDC1Q9NW68 430 aaPredicted RBP8.05□□□□□ -1.12
USP54-206ENST00000433394 U3KQE9 123 aa8.05□□□□□ -1.12
USP54-206ENST00000433394 A0A1W2PQ45 241 aaPredicted RBP8.04□□□□□ -1.12
USP54-206ENST00000433394 A0A1W2PQY0 241 aa8.04□□□□□ -1.12
USP54-206ENST00000433394 TMEM82A0PJX8 343 aa8.04□□□□□ -1.12
USP54-206ENST00000433394 MSTNO14793 375 aa8.04□□□□□ -1.12
USP54-206ENST00000433394 MSCO60682 206 aa8.04□□□□□ -1.12
USP54-206ENST00000433394 F2P00734 622 aa8.04□□□□□ -1.12
USP54-206ENST00000433394 ESR1P03372 595 aa8.04□□□□□ -1.12
USP54-206ENST00000433394 GNAT1P11488 350 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 1183.4 ms