RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 PPFIA3O75145 1194 aa23.09■■□□□ 1.29
CSNK1E-207ENST00000430335 CTDNEP1O95476 244 aa23.09■■□□□ 1.29
CSNK1E-207ENST00000430335 GJA8P48165 433 aa23.09■■□□□ 1.29
CSNK1E-207ENST00000430335 MCM2P49736 904 aa23.09■■□□□ 1.29
CSNK1E-207ENST00000430335 CCDC12Q8WUD4 166 aaPredicted RBP23.09■■□□□ 1.29
CSNK1E-207ENST00000430335 RIC8AQ9NPQ8 531 aa23.09■■□□□ 1.29
CSNK1E-207ENST00000430335 PXMP2Q9NR77 195 aa23.09■■□□□ 1.29
CSNK1E-207ENST00000430335 KIAA0100Q14667 2235 aaKnown RBP23.08■■□□□ 1.29
CSNK1E-207ENST00000430335 SGPL1O95470 568 aa23.08■■□□□ 1.29
CSNK1E-207ENST00000430335 ST3GAL1Q11201 340 aa23.08■■□□□ 1.29
CSNK1E-207ENST00000430335 ARHGEF16Q5VV41 709 aa23.08■■□□□ 1.29
CSNK1E-207ENST00000430335 USP17L6PQ6QN14 398 aa23.08■■□□□ 1.29
CSNK1E-207ENST00000430335 FAM177A1Q8N128 213 aaPredicted RBP23.08■■□□□ 1.29
CSNK1E-207ENST00000430335 SMARCC2Q8TAQ2 1214 aa23.08■■□□□ 1.29
CSNK1E-207ENST00000430335 DEFB118Q96PH6 123 aa23.08■■□□□ 1.29
CSNK1E-207ENST00000430335 VTA1Q9NP79 307 aa23.08■■□□□ 1.29
CSNK1E-207ENST00000430335 SH3GLB2Q9NR46 395 aa23.08■■□□□ 1.29
CSNK1E-207ENST00000430335 DDX20Q9UHI6 824 aaKnown RBP23.08■■□□□ 1.29
CSNK1E-207ENST00000430335 FRMPD4Q14CM0 1322 aa23.08■■□□□ 1.28
CSNK1E-207ENST00000430335 SMCO2A6NFE2 343 aa23.07■■□□□ 1.28
CSNK1E-207ENST00000430335 CNGA1P29973 690 aa23.07■■□□□ 1.28
CSNK1E-207ENST00000430335 ADCY7P51828 1080 aa23.07■■□□□ 1.28
CSNK1E-207ENST00000430335 PDE4DQ08499 809 aa23.07■■□□□ 1.28
CSNK1E-207ENST00000430335 LHX8Q68G74 356 aa23.07■■□□□ 1.28
CSNK1E-207ENST00000430335 FCHSD1Q86WN1 690 aa23.07■■□□□ 1.28
CSNK1E-207ENST00000430335 NSUN7Q8NE18 718 aaKnown RBP23.07■■□□□ 1.28
CSNK1E-207ENST00000430335 CCDC148Q8NFR7 591 aa23.07■■□□□ 1.28
CSNK1E-207ENST00000430335 U2AF1L4Q8WU68 220 aaKnown RBP23.07■■□□□ 1.28
CSNK1E-207ENST00000430335 PDCD2LQ9BRP1 358 aa23.07■■□□□ 1.28
CSNK1E-207ENST00000430335 CRISPLD2Q9H0B8 497 aa23.07■■□□□ 1.28
CSNK1E-207ENST00000430335 ZMYND12Q9H0C1 365 aa23.07■■□□□ 1.28
CSNK1E-207ENST00000430335 ZHX1Q9UKY1 873 aaPredicted RBP23.07■■□□□ 1.28
CSNK1E-207ENST00000430335 POTEFA5A3E0 1075 aa23.06■■□□□ 1.28
CSNK1E-207ENST00000430335 AKR1A1P14550 325 aa23.06■■□□□ 1.28
CSNK1E-207ENST00000430335 EIF2AK2P19525 551 aaKnown RBP23.06■■□□□ 1.28
CSNK1E-207ENST00000430335 FAM184BQ9ULE4 1060 aa23.06■■□□□ 1.28
CSNK1E-207ENST00000430335 DDX49Q9Y6V7 483 aaKnown RBP23.06■■□□□ 1.28
CSNK1E-207ENST00000430335 NR3C2P08235 984 aa23.05■■□□□ 1.28
CSNK1E-207ENST00000430335 SOX10P56693 466 aa23.05■■□□□ 1.28
CSNK1E-207ENST00000430335 LLPHQ9BRT6 129 aaKnown RBP23.05■■□□□ 1.28
CSNK1E-207ENST00000430335 ORC3Q9UBD5 711 aaPredicted RBP23.05■■□□□ 1.28
CSNK1E-207ENST00000430335 BRCA2P51587 3418 aa23.05■■□□□ 1.28
CSNK1E-207ENST00000430335 CD2BP2O95400 341 aaKnown RBP23.04■■□□□ 1.28
CSNK1E-207ENST00000430335 GNA11P29992 359 aa23.04■■□□□ 1.28
CSNK1E-207ENST00000430335 CLK2P49760 499 aaKnown RBP23.04■■□□□ 1.28
CSNK1E-207ENST00000430335 PGM5Q15124 567 aa23.04■■□□□ 1.28
CSNK1E-207ENST00000430335 STXBP2Q15833 593 aa23.04■■□□□ 1.28
CSNK1E-207ENST00000430335 UBE2SQ16763 222 aa23.04■■□□□ 1.28
CSNK1E-207ENST00000430335 TAPT1Q6NXT6 567 aa23.04■■□□□ 1.28
CSNK1E-207ENST00000430335 CCDC83Q8IWF9 413 aa23.04■■□□□ 1.28
CSNK1E-207ENST00000430335 FBXO16Q8IX29 292 aaPredicted RBP23.04■■□□□ 1.28
CSNK1E-207ENST00000430335 WASF1Q92558 559 aa23.04■■□□□ 1.28
CSNK1E-207ENST00000430335 SHISA4Q96DD7 197 aa23.04■■□□□ 1.28
CSNK1E-207ENST00000430335 C6orf50Q9HD87 102 aa23.04■■□□□ 1.28
CSNK1E-207ENST00000430335 VPS54Q9P1Q0 977 aa23.04■■□□□ 1.28
CSNK1E-207ENST00000430335 OGDHLQ9ULD0 1010 aa23.04■■□□□ 1.28
CSNK1E-207ENST00000430335 MCM3APO60318 1980 aa23.03■■□□□ 1.28
CSNK1E-207ENST00000430335 RBM47A0AV96 593 aaKnown RBP23.03■■□□□ 1.28
CSNK1E-207ENST00000430335 SPDYE3A6NKU9 549 aa23.03■■□□□ 1.28
CSNK1E-207ENST00000430335 FOSP01100 380 aaPredicted RBP23.03■■□□□ 1.28
CSNK1E-207ENST00000430335 FDPSP14324 419 aaKnown RBP23.03■■□□□ 1.28
CSNK1E-207ENST00000430335 CCDC144BQ3MJ40 725 aa23.03■■□□□ 1.28
CSNK1E-207ENST00000430335 EEPD1Q7L9B9 569 aa23.03■■□□□ 1.28
CSNK1E-207ENST00000430335 VSIG10LQ86VR7 867 aa23.03■■□□□ 1.28
CSNK1E-207ENST00000430335 EIF3JO75822 258 aaKnown RBP23.02■■□□□ 1.28
CSNK1E-207ENST00000430335 TFRCP02786 760 aaKnown RBP23.02■■□□□ 1.28
CSNK1E-207ENST00000430335 RARBP10826 455 aa23.02■■□□□ 1.28
CSNK1E-207ENST00000430335 EN2P19622 333 aaPredicted RBP23.02■■□□□ 1.28
CSNK1E-207ENST00000430335 CCND2P30279 289 aa23.02■■□□□ 1.28
CSNK1E-207ENST00000430335 AP3B2Q13367 1082 aa23.02■■□□□ 1.28
CSNK1E-207ENST00000430335 MCTP2Q6DN12 878 aa23.02■■□□□ 1.28
CSNK1E-207ENST00000430335 IQSEC1Q6DN90 963 aa23.02■■□□□ 1.28
CSNK1E-207ENST00000430335 XRRA1Q6P2D8 792 aa23.02■■□□□ 1.28
CSNK1E-207ENST00000430335 BICD2Q8TD16 824 aa23.02■■□□□ 1.28
CSNK1E-207ENST00000430335 TMX3Q96JJ7 454 aa23.02■■□□□ 1.28
CSNK1E-207ENST00000430335 PCDHA6Q9UN73 950 aa23.02■■□□□ 1.28
CSNK1E-207ENST00000430335 PCDHA8Q9Y5H6 950 aa23.02■■□□□ 1.28
CSNK1E-207ENST00000430335 JAK2O60674 1132 aa23.01■■□□□ 1.27
CSNK1E-207ENST00000430335 XBP1P17861 261 aa23.01■■□□□ 1.27
CSNK1E-207ENST00000430335 NLRP5P59047 1200 aa23.01■■□□□ 1.27
CSNK1E-207ENST00000430335 IL31RAQ8NI17 732 aa23.01■■□□□ 1.27
CSNK1E-207ENST00000430335 AIFM3Q96NN9 605 aa23.01■■□□□ 1.27
CSNK1E-207ENST00000430335 EHMT1Q9H9B1 1298 aa23.01■■□□□ 1.27
CSNK1E-207ENST00000430335 PDGFCQ9NRA1 345 aa23.01■■□□□ 1.27
CSNK1E-207ENST00000430335 LRRC37A2A6NM11 1700 aa23.01■■□□□ 1.27
CSNK1E-207ENST00000430335 DUSP11O75319 330 aaKnown RBP23■■□□□ 1.27
CSNK1E-207ENST00000430335 STAM2O75886 525 aa23■■□□□ 1.27
CSNK1E-207ENST00000430335 MYCLP12524 364 aaPredicted RBP23■■□□□ 1.27
CSNK1E-207ENST00000430335 ADCYAP1R1P41586 468 aa23■■□□□ 1.27
CSNK1E-207ENST00000430335 TNFAIP2Q03169 654 aa23■■□□□ 1.27
CSNK1E-207ENST00000430335 PCNX4Q63HM2 1172 aa23■■□□□ 1.27
CSNK1E-207ENST00000430335 GALNT17Q6IS24 598 aa23■■□□□ 1.27
CSNK1E-207ENST00000430335 ANKLE1Q8NAG6 615 aa23■■□□□ 1.27
CSNK1E-207ENST00000430335 DTNBO60941 627 aa22.99■■□□□ 1.27
CSNK1E-207ENST00000430335 HMGN5P82970 282 aaKnown RBP22.99■■□□□ 1.27
CSNK1E-207ENST00000430335 ANO1Q5XXA6 986 aa22.99■■□□□ 1.27
CSNK1E-207ENST00000430335 REXO1Q8N1G1 1221 aaKnown RBP22.99■■□□□ 1.27
CSNK1E-207ENST00000430335 DAGLBQ8NCG7 672 aa22.99■■□□□ 1.27
CSNK1E-207ENST00000430335 SCFD2Q8WU76 684 aa22.99■■□□□ 1.27
CSNK1E-207ENST00000430335 ALG1Q9BT22 464 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms