RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	HIPK3	Q9H422	1215 aa		20.72	■□□□□ 0.91
MRPL28-203	ENST00000429738		U3KPZ7	1027 aa	Predicted RBP	20.72	■□□□□ 0.91
MRPL28-203	ENST00000429738	RBM47	A0AV96	593 aa	Known RBP	20.71	■□□□□ 0.91
MRPL28-203	ENST00000429738	IGFBP4	P22692	258 aa		20.71	■□□□□ 0.91
MRPL28-203	ENST00000429738	PTGS1	P23219	599 aa		20.71	■□□□□ 0.91
MRPL28-203	ENST00000429738	CALML3	P27482	149 aa		20.71	■□□□□ 0.91
MRPL28-203	ENST00000429738	ITGA7	Q13683	1181 aa		20.71	■□□□□ 0.91
MRPL28-203	ENST00000429738	CCDC85B	Q15834	202 aa	Predicted RBP	20.71	■□□□□ 0.91
MRPL28-203	ENST00000429738	FSCN1	Q16658	493 aa	Known RBP	20.71	■□□□□ 0.91
MRPL28-203	ENST00000429738	USH1G	Q495M9	461 aa		20.71	■□□□□ 0.91
MRPL28-203	ENST00000429738	IFIT1B	Q5T764	474 aa	Known RBP	20.71	■□□□□ 0.91
MRPL28-203	ENST00000429738	DNER	Q8NFT8	737 aa		20.71	■□□□□ 0.91
MRPL28-203	ENST00000429738	AP5M1	Q9H0R1	490 aa		20.71	■□□□□ 0.91
MRPL28-203	ENST00000429738	NKX2-4	Q9H2Z4	354 aa		20.71	■□□□□ 0.91
MRPL28-203	ENST00000429738	SLC28A3	Q9HAS3	691 aa		20.71	■□□□□ 0.91
MRPL28-203	ENST00000429738	BDP1	A6H8Y1	2624 aa		20.7	■□□□□ 0.9
MRPL28-203	ENST00000429738	ZEB2	O60315	1214 aa		20.7	■□□□□ 0.9
MRPL28-203	ENST00000429738	PARP1	P09874	1014 aa	Known RBP	20.7	■□□□□ 0.9
MRPL28-203	ENST00000429738	DUSP28	Q4G0W2	176 aa		20.7	■□□□□ 0.9
MRPL28-203	ENST00000429738	KIAA1211	Q6ZU35	1233 aa		20.7	■□□□□ 0.9
MRPL28-203	ENST00000429738	TAF6L	Q9Y6J9	622 aa		20.7	■□□□□ 0.9
MRPL28-203	ENST00000429738	GRIN2D	O15399	1336 aa		20.7	■□□□□ 0.9
MRPL28-203	ENST00000429738	DYNC1LI2	O43237	492 aa	Predicted RBP	20.69	■□□□□ 0.9
MRPL28-203	ENST00000429738	QRICH1	Q2TAL8	776 aa		20.69	■□□□□ 0.9
MRPL28-203	ENST00000429738	OTOP2	Q7RTS6	562 aa		20.69	■□□□□ 0.9
MRPL28-203	ENST00000429738	RPUSD2	Q8IZ73	545 aa	Known RBP	20.69	■□□□□ 0.9
MRPL28-203	ENST00000429738	STAG2	Q8N3U4	1231 aa		20.69	■□□□□ 0.9
MRPL28-203	ENST00000429738	ADAMTS19	Q8TE59	1207 aa		20.69	■□□□□ 0.9
MRPL28-203	ENST00000429738	MAP4K1	Q92918	833 aa		20.69	■□□□□ 0.9
MRPL28-203	ENST00000429738	JMJD4	Q9H9V9	463 aa		20.69	■□□□□ 0.9
MRPL28-203	ENST00000429738	YBX2	Q9Y2T7	364 aa	Known RBP	20.69	■□□□□ 0.9
MRPL28-203	ENST00000429738	ABCB11	O95342	1321 aa		20.69	■□□□□ 0.9
MRPL28-203	ENST00000429738	UMODL1	Q5DID0	1318 aa		20.69	■□□□□ 0.9
MRPL28-203	ENST00000429738	CCL23	P55773	120 aa		20.68	■□□□□ 0.9
MRPL28-203	ENST00000429738	TRDN	Q13061	729 aa		20.68	■□□□□ 0.9
MRPL28-203	ENST00000429738	MTMR8	Q96EF0	704 aa		20.68	■□□□□ 0.9
MRPL28-203	ENST00000429738	NOC4L	Q9BVI4	516 aa	Known RBP	20.68	■□□□□ 0.9
MRPL28-203	ENST00000429738	TRPV6	Q9H1D0	765 aa		20.68	■□□□□ 0.9
MRPL28-203	ENST00000429738	MAD2L2	Q9UI95	211 aa		20.68	■□□□□ 0.9
MRPL28-203	ENST00000429738		E7EWF7	191 aa		20.67	■□□□□ 0.9
MRPL28-203	ENST00000429738	STOX1	Q6ZVD7	989 aa		20.67	■□□□□ 0.9
MRPL28-203	ENST00000429738	TBC1D5	Q92609	795 aa		20.67	■□□□□ 0.9
MRPL28-203	ENST00000429738	WDR11	Q9BZH6	1224 aa		20.67	■□□□□ 0.9
MRPL28-203	ENST00000429738	SLC4A7	Q9Y6M7	1214 aa		20.67	■□□□□ 0.9
MRPL28-203	ENST00000429738	CHD7	Q9P2D1	2997 aa		20.67	■□□□□ 0.9
MRPL28-203	ENST00000429738	GBF1	Q92538	1859 aa		20.67	■□□□□ 0.9
MRPL28-203	ENST00000429738	PALM3	A6NDB9	673 aa	Predicted RBP	20.66	■□□□□ 0.9
MRPL28-203	ENST00000429738	B4GALT4	O60513	344 aa		20.66	■□□□□ 0.9
MRPL28-203	ENST00000429738	NCOA7	Q8NI08	942 aa		20.66	■□□□□ 0.9
MRPL28-203	ENST00000429738	UHRF1	Q96T88	793 aa	Predicted RBP	20.66	■□□□□ 0.9
MRPL28-203	ENST00000429738	MPHOSPH6	Q99547	160 aa	Known RBP	20.66	■□□□□ 0.9
MRPL28-203	ENST00000429738	WNT8A	Q9H1J5	351 aa		20.66	■□□□□ 0.9
MRPL28-203	ENST00000429738	TSPYL2	Q9H2G4	693 aa	Predicted RBP	20.66	■□□□□ 0.9
MRPL28-203	ENST00000429738	KIAA1217	Q5T5P2	1943 aa		20.66	■□□□□ 0.9
MRPL28-203	ENST00000429738	KLRF2	D3W0D1	207 aa		20.65	■□□□□ 0.9
MRPL28-203	ENST00000429738	RABGGTB	P53611	331 aa		20.65	■□□□□ 0.9
MRPL28-203	ENST00000429738	GHRHR	Q02643	423 aa		20.65	■□□□□ 0.9
MRPL28-203	ENST00000429738	PDE4D	Q08499	809 aa		20.65	■□□□□ 0.9
MRPL28-203	ENST00000429738	FBXO11	Q86XK2	927 aa		20.65	■□□□□ 0.9
MRPL28-203	ENST00000429738	IL27	Q8NEV9	243 aa		20.65	■□□□□ 0.9
MRPL28-203	ENST00000429738	SYTL5	Q8TDW5	730 aa	Predicted RBP	20.65	■□□□□ 0.9
MRPL28-203	ENST00000429738	VAT1L	Q9HCJ6	419 aa		20.65	■□□□□ 0.9
MRPL28-203	ENST00000429738	COL20A1	Q9P218	1284 aa		20.65	■□□□□ 0.9
MRPL28-203	ENST00000429738	MRPL11	Q9Y3B7	192 aa	Known RBP	20.65	■□□□□ 0.9
MRPL28-203	ENST00000429738	PCDHA11	Q9Y5I1	949 aa		20.65	■□□□□ 0.9
MRPL28-203	ENST00000429738	BAZ2B	Q9UIF8	2168 aa	Known RBP	20.65	■□□□□ 0.9
MRPL28-203	ENST00000429738	SCN10A	Q9Y5Y9	1956 aa		20.65	■□□□□ 0.9
MRPL28-203	ENST00000429738		B4DLN1	442 aa		20.64	■□□□□ 0.89
MRPL28-203	ENST00000429738	NKRF	O15226	690 aa	Known RBP eCLIP	20.64	■□□□□ 0.89
MRPL28-203	ENST00000429738	MRPL12	P52815	198 aa	Known RBP	20.64	■□□□□ 0.89
MRPL28-203	ENST00000429738	ANTXR2	P58335	489 aa		20.64	■□□□□ 0.89
MRPL28-203	ENST00000429738	PSMC6	P62333	389 aa		20.64	■□□□□ 0.89
MRPL28-203	ENST00000429738	GRM4	Q14833	912 aa		20.64	■□□□□ 0.89
MRPL28-203	ENST00000429738	SLC35G1	Q2M3R5	365 aa		20.64	■□□□□ 0.89
MRPL28-203	ENST00000429738	RALYL	Q86SE5	291 aa	Known RBP	20.64	■□□□□ 0.89
MRPL28-203	ENST00000429738	MCF2L2	Q86YR7	1114 aa		20.64	■□□□□ 0.89
MRPL28-203	ENST00000429738	MB21D2	Q8IYB1	491 aa	Predicted RBP	20.64	■□□□□ 0.89
MRPL28-203	ENST00000429738	SCFD2	Q8WU76	684 aa		20.64	■□□□□ 0.89
MRPL28-203	ENST00000429738	VWCE	Q96DN2	955 aa		20.64	■□□□□ 0.89
MRPL28-203	ENST00000429738	SENP2	Q9HC62	589 aa		20.64	■□□□□ 0.89
MRPL28-203	ENST00000429738	RBM8A	Q9Y5S9	174 aa	Known RBP	20.64	■□□□□ 0.89
MRPL28-203	ENST00000429738	OPLAH	O14841	1288 aa		20.63	■□□□□ 0.89
MRPL28-203	ENST00000429738	IFIT3	O14879	490 aa	Known RBP	20.63	■□□□□ 0.89
MRPL28-203	ENST00000429738	DHX16	O60231	1041 aa	Known RBP	20.63	■□□□□ 0.89
MRPL28-203	ENST00000429738	PPP1R11	O60927	126 aa	Predicted RBP	20.63	■□□□□ 0.89
MRPL28-203	ENST00000429738	TROAP	Q12815	778 aa		20.63	■□□□□ 0.89
MRPL28-203	ENST00000429738	PPP2R5B	Q15173	497 aa		20.63	■□□□□ 0.89
MRPL28-203	ENST00000429738	PPP2R2D	Q66LE6	453 aa		20.63	■□□□□ 0.89
MRPL28-203	ENST00000429738	TAAR1	Q96RJ0	339 aa		20.63	■□□□□ 0.89
MRPL28-203	ENST00000429738	AMN	Q9BXJ7	453 aa		20.63	■□□□□ 0.89
MRPL28-203	ENST00000429738	LSG1	Q9H089	658 aa	Known RBP	20.63	■□□□□ 0.89
MRPL28-203	ENST00000429738	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	20.63	■□□□□ 0.89
MRPL28-203	ENST00000429738	RIOX1	Q9H6W3	641 aa		20.63	■□□□□ 0.89
MRPL28-203	ENST00000429738	ERICH2	A1L162	156 aa		20.62	■□□□□ 0.89
MRPL28-203	ENST00000429738	ZBTB5	O15062	677 aa		20.62	■□□□□ 0.89
MRPL28-203	ENST00000429738	SUPT20HL2	P0C7V6	817 aa		20.62	■□□□□ 0.89
MRPL28-203	ENST00000429738	MYOG	P15173	224 aa		20.62	■□□□□ 0.89
MRPL28-203	ENST00000429738	CPT1A	P50416	773 aa		20.62	■□□□□ 0.89
MRPL28-203	ENST00000429738	PURA	Q00577	322 aa	Known RBP	20.62	■□□□□ 0.89
MRPL28-203	ENST00000429738	WTAP	Q15007	396 aa		20.62	■□□□□ 0.89

Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms