RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.72■□□□□ 0.27
SGCE-204ENST00000428696 C6orf50Q9HD87 102 aa16.72■□□□□ 0.27
SGCE-204ENST00000428696 HTTP42858 3142 aa16.72■□□□□ 0.27
SGCE-204ENST00000428696 SPDYE3A6NKU9 549 aa16.71■□□□□ 0.27
SGCE-204ENST00000428696 hCG_1984214I3L0E3 225 aa16.71■□□□□ 0.27
SGCE-204ENST00000428696 ACVR2BQ13705 512 aa16.71■□□□□ 0.27
SGCE-204ENST00000428696 MAMDC4Q6UXC1 1216 aa16.71■□□□□ 0.27
SGCE-204ENST00000428696 MSL3Q8N5Y2 521 aaKnown RBP16.71■□□□□ 0.27
SGCE-204ENST00000428696 ZNF713Q8N859 430 aaPredicted RBP16.71■□□□□ 0.27
SGCE-204ENST00000428696 TRPV1Q8NER1 839 aa16.71■□□□□ 0.27
SGCE-204ENST00000428696 WASF1Q92558 559 aa16.71■□□□□ 0.27
SGCE-204ENST00000428696 TMX3Q96JJ7 454 aa16.71■□□□□ 0.27
SGCE-204ENST00000428696 ALG1Q9BT22 464 aa16.71■□□□□ 0.27
SGCE-204ENST00000428696 PXMP2Q9NR77 195 aa16.71■□□□□ 0.27
SGCE-204ENST00000428696 MAP3K20Q9NYL2 800 aaKnown RBP16.71■□□□□ 0.27
SGCE-204ENST00000428696 ASTN1O14525 1302 aa16.71■□□□□ 0.27
SGCE-204ENST00000428696 SYNGAP1Q96PV0 1343 aa16.71■□□□□ 0.27
SGCE-204ENST00000428696 MYH6P13533 1939 aa16.71■□□□□ 0.26
SGCE-204ENST00000428696 ZNFX1Q9P2E3 1918 aaKnown RBP16.71■□□□□ 0.26
SGCE-204ENST00000428696 MEIS2O14770 477 aa16.7■□□□□ 0.26
SGCE-204ENST00000428696 XBP1P17861 261 aa16.7■□□□□ 0.26
SGCE-204ENST00000428696 JAKMIP3Q5VZ66 844 aa16.7■□□□□ 0.26
SGCE-204ENST00000428696 PPP1R18Q6NYC8 613 aa16.7■□□□□ 0.26
SGCE-204ENST00000428696 FBXO16Q8IX29 292 aaPredicted RBP16.7■□□□□ 0.26
SGCE-204ENST00000428696 SAMD3Q8N6K7 520 aa16.7■□□□□ 0.26
SGCE-204ENST00000428696 FAM184AQ8NB25 1140 aa16.7■□□□□ 0.26
SGCE-204ENST00000428696 NSUN7Q8NE18 718 aaKnown RBP16.7■□□□□ 0.26
SGCE-204ENST00000428696 CCDC148Q8NFR7 591 aa16.7■□□□□ 0.26
SGCE-204ENST00000428696 ABHD16BQ9H3Z7 469 aa16.7■□□□□ 0.26
SGCE-204ENST00000428696 RIC8AQ9NPQ8 531 aa16.7■□□□□ 0.26
SGCE-204ENST00000428696 TMEM260Q9NX78 707 aa16.7■□□□□ 0.26
SGCE-204ENST00000428696 GNA11P29992 359 aa16.7■□□□□ 0.26
SGCE-204ENST00000428696 TRIM29Q14134 588 aa16.7■□□□□ 0.26
SGCE-204ENST00000428696 STXBP2Q15833 593 aa16.7■□□□□ 0.26
SGCE-204ENST00000428696 MAP3K21Q5TCX8 1036 aa16.7■□□□□ 0.26
SGCE-204ENST00000428696 SEPT14Q6ZU15 432 aa16.7■□□□□ 0.26
SGCE-204ENST00000428696 IL27Q8NEV9 243 aa16.7■□□□□ 0.26
SGCE-204ENST00000428696 PGBD1Q96JS3 809 aa16.7■□□□□ 0.26
SGCE-204ENST00000428696 MAF1Q9H063 256 aa16.7■□□□□ 0.26
SGCE-204ENST00000428696 GJB4Q9NTQ9 266 aa16.7■□□□□ 0.26
SGCE-204ENST00000428696 FAM184BQ9ULE4 1060 aa16.7■□□□□ 0.26
SGCE-204ENST00000428696 PCDHA6Q9UN73 950 aa16.7■□□□□ 0.26
SGCE-204ENST00000428696 KCNJ14Q9UNX9 436 aa16.7■□□□□ 0.26
SGCE-204ENST00000428696 PCDHA8Q9Y5H6 950 aa16.7■□□□□ 0.26
SGCE-204ENST00000428696 NR3C2P08235 984 aa16.69■□□□□ 0.26
SGCE-204ENST00000428696 CYBAP13498 195 aa16.69■□□□□ 0.26
SGCE-204ENST00000428696 ST3GAL1Q11201 340 aa16.69■□□□□ 0.26
SGCE-204ENST00000428696 CCDC144BQ3MJ40 725 aa16.69■□□□□ 0.26
SGCE-204ENST00000428696 IWS1Q96ST2 819 aa16.69■□□□□ 0.26
SGCE-204ENST00000428696 GLT8D2Q9H1C3 349 aa16.69■□□□□ 0.26
SGCE-204ENST00000428696 PDGFCQ9NRA1 345 aa16.69■□□□□ 0.26
SGCE-204ENST00000428696 RTEL1Q9NZ71 1219 aa16.69■□□□□ 0.26
SGCE-204ENST00000428696 POTEFA5A3E0 1075 aa16.68■□□□□ 0.26
SGCE-204ENST00000428696 PIK3CDO00329 1044 aa16.68■□□□□ 0.26
SGCE-204ENST00000428696 GJB1P08034 283 aa16.68■□□□□ 0.26
SGCE-204ENST00000428696 ZNF865P0CJ78 1059 aaPredicted RBP16.68■□□□□ 0.26
SGCE-204ENST00000428696 EN2P19622 333 aaPredicted RBP16.68■□□□□ 0.26
SGCE-204ENST00000428696 CCND2P30279 289 aa16.68■□□□□ 0.26
SGCE-204ENST00000428696 GUCY1B3Q02153 619 aa16.68■□□□□ 0.26
SGCE-204ENST00000428696 BICD2Q8TD16 824 aa16.68■□□□□ 0.26
SGCE-204ENST00000428696 RASGRP4Q8TDF6 673 aa16.68■□□□□ 0.26
SGCE-204ENST00000428696 PDCD2LQ9BRP1 358 aa16.68■□□□□ 0.26
SGCE-204ENST00000428696 LLPHQ9BRT6 129 aaKnown RBP16.68■□□□□ 0.26
SGCE-204ENST00000428696 ZMYND12Q9H0C1 365 aa16.68■□□□□ 0.26
SGCE-204ENST00000428696 EHMT1Q9H9B1 1298 aa16.68■□□□□ 0.26
SGCE-204ENST00000428696 SH3GLB2Q9NR46 395 aa16.68■□□□□ 0.26
SGCE-204ENST00000428696 DDX20Q9UHI6 824 aaKnown RBP16.68■□□□□ 0.26
SGCE-204ENST00000428696 STK36Q9NRP7 1315 aa16.68■□□□□ 0.26
SGCE-204ENST00000428696 SEPT4O43236 478 aa16.67■□□□□ 0.26
SGCE-204ENST00000428696 RARBP10826 455 aa16.67■□□□□ 0.26
SGCE-204ENST00000428696 FDPSP14324 419 aaKnown RBP16.67■□□□□ 0.26
SGCE-204ENST00000428696 ADCYAP1R1P41586 468 aa16.67■□□□□ 0.26
SGCE-204ENST00000428696 TNFAIP2Q03169 654 aa16.67■□□□□ 0.26
SGCE-204ENST00000428696 PGM5Q15124 567 aa16.67■□□□□ 0.26
SGCE-204ENST00000428696 REXO1Q8N1G1 1221 aaKnown RBP16.67■□□□□ 0.26
SGCE-204ENST00000428696 IL31RAQ8NI17 732 aa16.67■□□□□ 0.26
SGCE-204ENST00000428696 U2AF1L4Q8WU68 220 aaKnown RBP16.67■□□□□ 0.26
SGCE-204ENST00000428696 LENG1Q96BZ8 264 aaPredicted RBP16.67■□□□□ 0.26
SGCE-204ENST00000428696 VTA1Q9NP79 307 aa16.67■□□□□ 0.26
SGCE-204ENST00000428696 FOXD4L1Q9NU39 408 aa16.67■□□□□ 0.26
SGCE-204ENST00000428696 ADAMTS3O15072 1205 aa16.66■□□□□ 0.26
SGCE-204ENST00000428696 EIF3JO75822 258 aaKnown RBP16.66■□□□□ 0.26
SGCE-204ENST00000428696 SGPL1O95470 568 aa16.66■□□□□ 0.26
SGCE-204ENST00000428696 FOSP01100 380 aaPredicted RBP16.66■□□□□ 0.26
SGCE-204ENST00000428696 AKR1A1P14550 325 aa16.66■□□□□ 0.26
SGCE-204ENST00000428696 ZNF76P36508 570 aa16.66■□□□□ 0.26
SGCE-204ENST00000428696 GHRHRQ02643 423 aa16.66■□□□□ 0.26
SGCE-204ENST00000428696 WDR11Q9BZH6 1224 aa16.66■□□□□ 0.26
SGCE-204ENST00000428696 PAK6Q9NQU5 681 aaPredicted RBP16.66■□□□□ 0.26
SGCE-204ENST00000428696 NRBP1Q9UHY1 535 aa16.66■□□□□ 0.26
SGCE-204ENST00000428696 ZNF236Q9UL36 1845 aa16.66■□□□□ 0.26
SGCE-204ENST00000428696 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.65■□□□□ 0.26
SGCE-204ENST00000428696 IGHA2P01877 340 aa16.65■□□□□ 0.26
SGCE-204ENST00000428696 IQSEC1Q6DN90 963 aa16.65■□□□□ 0.26
SGCE-204ENST00000428696 VSIG10LQ86VR7 867 aa16.65■□□□□ 0.26
SGCE-204ENST00000428696 HSCBQ8IWL3 235 aa16.65■□□□□ 0.26
SGCE-204ENST00000428696 BLIDQ8IZY5 108 aa16.65■□□□□ 0.26
SGCE-204ENST00000428696 SHISA4Q96DD7 197 aa16.65■□□□□ 0.26
SGCE-204ENST00000428696 AP5M1Q9H0R1 490 aa16.65■□□□□ 0.26
SGCE-204ENST00000428696 XPNPEP3Q9NQH7 507 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms