RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 FCGRTP55899 365 aa9.01□□□□□ -0.97
HMGA1P4-201ENST00000428643 CNTN2Q02246 1040 aa9.01□□□□□ -0.97
HMGA1P4-201ENST00000428643 MAP2K1Q02750 393 aaPredicted RBP9.01□□□□□ -0.97
HMGA1P4-201ENST00000428643 NBR1Q14596 966 aa9.01□□□□□ -0.97
HMGA1P4-201ENST00000428643 KIF22Q14807 665 aa9.01□□□□□ -0.97
HMGA1P4-201ENST00000428643 LETM2Q2VYF4 491 aa9.01□□□□□ -0.97
HMGA1P4-201ENST00000428643 TTC38Q5R3I4 469 aa9.01□□□□□ -0.97
HMGA1P4-201ENST00000428643 NSUN6Q8TEA1 469 aaKnown RBP9.01□□□□□ -0.97
HMGA1P4-201ENST00000428643 GBP4Q96PP9 640 aa9.01□□□□□ -0.97
HMGA1P4-201ENST00000428643 PURBQ96QR8 312 aaKnown RBP9.01□□□□□ -0.97
HMGA1P4-201ENST00000428643 USP28Q96RU2 1077 aa9.01□□□□□ -0.97
HMGA1P4-201ENST00000428643 FTOQ9C0B1 505 aaKnown RBP eCLIP9.01□□□□□ -0.97
HMGA1P4-201ENST00000428643 MAF1Q9H063 256 aa9.01□□□□□ -0.97
HMGA1P4-201ENST00000428643 SAGE1Q9NXZ1 904 aa9.01□□□□□ -0.97
HMGA1P4-201ENST00000428643 ADD3Q9UEY8 706 aaKnown RBP9.01□□□□□ -0.97
HMGA1P4-201ENST00000428643 RPTORQ8N122 1335 aa9.01□□□□□ -0.97
HMGA1P4-201ENST00000428643 SLC15A5A6NIM6 579 aa9□□□□□ -0.97
HMGA1P4-201ENST00000428643 STRNO43815 780 aa9□□□□□ -0.97
HMGA1P4-201ENST00000428643 CCNT1O60563 726 aaKnown RBP9□□□□□ -0.97
HMGA1P4-201ENST00000428643 TDP2O95551 362 aa9□□□□□ -0.97
HMGA1P4-201ENST00000428643 GCFC2P16383 781 aaKnown RBP9□□□□□ -0.97
HMGA1P4-201ENST00000428643 PTPREP23469 700 aa9□□□□□ -0.97
HMGA1P4-201ENST00000428643 MCM7P33993 719 aa9□□□□□ -0.97
HMGA1P4-201ENST00000428643 ZNF76P36508 570 aa9□□□□□ -0.97
HMGA1P4-201ENST00000428643 ALDH5A1P51649 535 aaPredicted RBP9□□□□□ -0.97
HMGA1P4-201ENST00000428643 LACTBP83111 547 aaPredicted RBP9□□□□□ -0.97
HMGA1P4-201ENST00000428643 STK38Q15208 465 aa9□□□□□ -0.97
HMGA1P4-201ENST00000428643 ZNF174Q15697 407 aa9□□□□□ -0.97
HMGA1P4-201ENST00000428643 ANO1Q5XXA6 986 aa9□□□□□ -0.97
HMGA1P4-201ENST00000428643 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9□□□□□ -0.97
HMGA1P4-201ENST00000428643 DPP9Q86TI2 863 aa9□□□□□ -0.97
HMGA1P4-201ENST00000428643 ABRAQ8N0Z2 381 aa9□□□□□ -0.97
HMGA1P4-201ENST00000428643 IL31RAQ8NI17 732 aa9□□□□□ -0.97
HMGA1P4-201ENST00000428643 SOCS4Q8WXH5 440 aa9□□□□□ -0.97
HMGA1P4-201ENST00000428643 TAAR1Q96RJ0 339 aa9□□□□□ -0.97
HMGA1P4-201ENST00000428643 MPHOSPH6Q99547 160 aaKnown RBP9□□□□□ -0.97
HMGA1P4-201ENST00000428643 NAP1L4Q99733 375 aaKnown RBP9□□□□□ -0.97
HMGA1P4-201ENST00000428643 CFHR5Q9BXR6 569 aa9□□□□□ -0.97
HMGA1P4-201ENST00000428643 PXMP2Q9NR77 195 aa9□□□□□ -0.97
HMGA1P4-201ENST00000428643 TFIP11Q9UBB9 837 aaKnown RBP9□□□□□ -0.97
HMGA1P4-201ENST00000428643 CFAP45Q9UL16 551 aa9□□□□□ -0.97
HMGA1P4-201ENST00000428643 CEP131Q9UPN4 1083 aa9□□□□□ -0.97
HMGA1P4-201ENST00000428643 CNPY2Q9Y2B0 182 aa9□□□□□ -0.97
HMGA1P4-201ENST00000428643 CLIC4Q9Y696 253 aa9□□□□□ -0.97
HMGA1P4-201ENST00000428643 FRMPD4Q14CM0 1322 aa9□□□□□ -0.97
HMGA1P4-201ENST00000428643 RBBP6Q7Z6E9 1792 aaKnown RBP8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 DNAJC25-GNG10A0A024R161 153 aa8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 B4DLN1 442 aa8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 WNT7AO00755 349 aa8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 NEMFO60524 1076 aa8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 BAG4O95429 457 aaKnown RBP8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 BMP15O95972 392 aa8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 MYCLP12524 364 aaPredicted RBP8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 CCND2P30279 289 aa8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 PSMC4P43686 418 aa8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 TOB1P50616 345 aaPredicted RBP8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 SP3Q02447 781 aa8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 PDE4DQ08499 809 aa8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 GRB14Q14449 540 aa8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 PGM5Q15124 567 aa8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 SF3A1Q15459 793 aaKnown RBP8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 PCNX4Q63HM2 1172 aa8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 ATL3Q6DD88 541 aa8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 FAM133AQ8N9E0 248 aa8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 TRIM47Q96LD4 638 aa8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 SPATA32Q96LK8 384 aa8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 APBA2Q99767 749 aa8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 PDCD2LQ9BRP1 358 aa8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 ARHGAP39Q9C0H5 1083 aa8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 GDPD2Q9HCC8 539 aa8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 SLC5A4Q9NY91 659 aa8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 DDX25Q9UHL0 483 aaKnown RBP8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 TSKSQ9UJT2 592 aa8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 PCDHB6Q9Y5E3 794 aa8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 MYH6P13533 1939 aa8.99□□□□□ -0.97
HMGA1P4-201ENST00000428643 COL11A1P12107 1806 aaPredicted RBP8.98□□□□□ -0.97
HMGA1P4-201ENST00000428643 SOWAHBA6NEL2 793 aa8.98□□□□□ -0.97
HMGA1P4-201ENST00000428643 GOLGA6L22H0YM25 854 aa8.98□□□□□ -0.97
HMGA1P4-201ENST00000428643 GPR25O00155 361 aa8.98□□□□□ -0.97
HMGA1P4-201ENST00000428643 SLC37A4O43826 429 aa8.98□□□□□ -0.97
HMGA1P4-201ENST00000428643 MARCH6O60337 910 aa8.98□□□□□ -0.97
HMGA1P4-201ENST00000428643 COBLO75128 1261 aa8.98□□□□□ -0.97
HMGA1P4-201ENST00000428643 YEATS4O95619 227 aa8.98□□□□□ -0.97
HMGA1P4-201ENST00000428643 NR3C2P08235 984 aa8.98□□□□□ -0.97
HMGA1P4-201ENST00000428643 OR52Z1P0C646 297 aa8.98□□□□□ -0.97
HMGA1P4-201ENST00000428643 RGS2P41220 211 aa8.98□□□□□ -0.97
HMGA1P4-201ENST00000428643 ME1P48163 572 aa8.98□□□□□ -0.97
HMGA1P4-201ENST00000428643 NASPP49321 788 aaPredicted RBP8.98□□□□□ -0.97
HMGA1P4-201ENST00000428643 USP11P51784 963 aa8.98□□□□□ -0.97
HMGA1P4-201ENST00000428643 SETQ01105 290 aaPredicted RBP8.98□□□□□ -0.97
HMGA1P4-201ENST00000428643 MAP2K5Q13163 448 aa8.98□□□□□ -0.97
HMGA1P4-201ENST00000428643 ORC2Q13416 577 aaPredicted RBP8.98□□□□□ -0.97
HMGA1P4-201ENST00000428643 CALCRLQ16602 461 aa8.98□□□□□ -0.97
HMGA1P4-201ENST00000428643 CSPP1Q1MSJ5 1256 aa8.98□□□□□ -0.97
HMGA1P4-201ENST00000428643 ZNF792Q3KQV3 632 aa8.98□□□□□ -0.97
HMGA1P4-201ENST00000428643 PRR16Q569H4 304 aa8.98□□□□□ -0.97
HMGA1P4-201ENST00000428643 MORN1Q5T089 497 aa8.98□□□□□ -0.97
HMGA1P4-201ENST00000428643 XRRA1Q6P2D8 792 aa8.98□□□□□ -0.97
HMGA1P4-201ENST00000428643 DNERQ8NFT8 737 aa8.98□□□□□ -0.97
HMGA1P4-201ENST00000428643 CD99L2Q8TCZ2 262 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms