RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 CNNM2Q9H8M5 875 aa20.37■□□□□ 0.85
DDR1-235ENST00000428153 MUC3AQ02505 3323 aa20.37■□□□□ 0.85
DDR1-235ENST00000428153 GRXCR1A8MXD5 290 aa20.36■□□□□ 0.85
DDR1-235ENST00000428153 PBX2P40425 430 aa20.36■□□□□ 0.85
DDR1-235ENST00000428153 CCL23P55773 120 aa20.36■□□□□ 0.85
DDR1-235ENST00000428153 CDC37Q16543 378 aaPredicted RBP20.36■□□□□ 0.85
DDR1-235ENST00000428153 MCF2L2Q86YR7 1114 aa20.36■□□□□ 0.85
DDR1-235ENST00000428153 IWS1Q96ST2 819 aa20.36■□□□□ 0.85
DDR1-235ENST00000428153 ZKSCAN3Q9BRR0 538 aa20.36■□□□□ 0.85
DDR1-235ENST00000428153 KRT23Q9C075 422 aa20.36■□□□□ 0.85
DDR1-235ENST00000428153 CXXC1Q9P0U4 656 aaPredicted RBP20.36■□□□□ 0.85
DDR1-235ENST00000428153 PITPNM1O00562 1244 aa20.35■□□□□ 0.85
DDR1-235ENST00000428153 IGHDP01880 384 aa20.35■□□□□ 0.85
DDR1-235ENST00000428153 MYL3P08590 195 aa20.35■□□□□ 0.85
DDR1-235ENST00000428153 GOLGA8HP0CJ92 632 aa20.35■□□□□ 0.85
DDR1-235ENST00000428153 RFC2P35250 354 aa20.35■□□□□ 0.85
DDR1-235ENST00000428153 USH1GQ495M9 461 aa20.35■□□□□ 0.85
DDR1-235ENST00000428153 ENAHQ8N8S7 591 aaPredicted RBP20.35■□□□□ 0.85
DDR1-235ENST00000428153 UBA5Q9GZZ9 404 aa20.35■□□□□ 0.85
DDR1-235ENST00000428153 ZSWIM5Q9P217 1185 aa20.35■□□□□ 0.85
DDR1-235ENST00000428153 TRANK1O15050 2925 aa20.34■□□□□ 0.85
DDR1-235ENST00000428153 TXNP10599 105 aaKnown RBP20.34■□□□□ 0.85
DDR1-235ENST00000428153 CCDC62Q6P9F0 684 aa20.34■□□□□ 0.85
DDR1-235ENST00000428153 OTOP2Q7RTS6 562 aa20.34■□□□□ 0.85
DDR1-235ENST00000428153 ADGRF4Q8IZF3 695 aa20.34■□□□□ 0.85
DDR1-235ENST00000428153 NSUN6Q8TEA1 469 aaKnown RBP20.34■□□□□ 0.85
DDR1-235ENST00000428153 SLC28A3Q9HAS3 691 aa20.34■□□□□ 0.85
DDR1-235ENST00000428153 TRMT13Q9NUP7 481 aaKnown RBP20.34■□□□□ 0.85
DDR1-235ENST00000428153 MRPL11Q9Y3B7 192 aaKnown RBP20.34■□□□□ 0.85
DDR1-235ENST00000428153 SLC4A7Q9Y6M7 1214 aa20.34■□□□□ 0.85
DDR1-235ENST00000428153 B4E1Z4 1266 aa20.33■□□□□ 0.85
DDR1-235ENST00000428153 NBPF20Q3BBV1 942 aa20.33■□□□□ 0.85
DDR1-235ENST00000428153 SYTL5Q8TDW5 730 aaPredicted RBP20.33■□□□□ 0.85
DDR1-235ENST00000428153 VWCEQ96DN2 955 aa20.33■□□□□ 0.85
DDR1-235ENST00000428153 MAP3K20Q9NYL2 800 aaKnown RBP20.33■□□□□ 0.85
DDR1-235ENST00000428153 PARP1P09874 1014 aaKnown RBP20.32■□□□□ 0.84
DDR1-235ENST00000428153 GHRHRQ02643 423 aa20.32■□□□□ 0.84
DDR1-235ENST00000428153 FBXO11Q86XK2 927 aa20.32■□□□□ 0.84
DDR1-235ENST00000428153 SAMD3Q8N6K7 520 aa20.32■□□□□ 0.84
DDR1-235ENST00000428153 UBAC1Q9BSL1 405 aa20.32■□□□□ 0.84
DDR1-235ENST00000428153 PCDHA11Q9Y5I1 949 aa20.32■□□□□ 0.84
DDR1-235ENST00000428153 ARIH2O95376 493 aa20.31■□□□□ 0.84
DDR1-235ENST00000428153 CYP2C9P11712 490 aa20.31■□□□□ 0.84
DDR1-235ENST00000428153 ACTN1P12814 892 aa20.31■□□□□ 0.84
DDR1-235ENST00000428153 STXBP2Q15833 593 aa20.31■□□□□ 0.84
DDR1-235ENST00000428153 QRICH1Q2TAL8 776 aa20.31■□□□□ 0.84
DDR1-235ENST00000428153 SESTD1Q86VW0 696 aa20.31■□□□□ 0.84
DDR1-235ENST00000428153 SCLYQ96I15 445 aa20.31■□□□□ 0.84
DDR1-235ENST00000428153 RMDN3Q96TC7 470 aa20.31■□□□□ 0.84
DDR1-235ENST00000428153 CPVLQ9H3G5 476 aa20.31■□□□□ 0.84
DDR1-235ENST00000428153 PRDM12Q9H4Q4 367 aa20.31■□□□□ 0.84
DDR1-235ENST00000428153 MYH6P13533 1939 aa20.3■□□□□ 0.84
DDR1-235ENST00000428153 GH1P01241 217 aa20.3■□□□□ 0.84
DDR1-235ENST00000428153 BFSP2Q13515 415 aa20.3■□□□□ 0.84
DDR1-235ENST00000428153 FAM47CQ5HY64 1035 aa20.3■□□□□ 0.84
DDR1-235ENST00000428153 TJAP1Q5JTD0 557 aa20.3■□□□□ 0.84
DDR1-235ENST00000428153 IFIT1BQ5T764 474 aaKnown RBP20.3■□□□□ 0.84
DDR1-235ENST00000428153 USP38Q8NB14 1042 aa20.3■□□□□ 0.84
DDR1-235ENST00000428153 PHOSPHO2Q8TCD6 241 aa20.3■□□□□ 0.84
DDR1-235ENST00000428153 COPS5Q92905 334 aa20.3■□□□□ 0.84
DDR1-235ENST00000428153 EMID1Q96A84 441 aaPredicted RBP20.3■□□□□ 0.84
DDR1-235ENST00000428153 TAAR1Q96RJ0 339 aa20.3■□□□□ 0.84
DDR1-235ENST00000428153 JMJD4Q9H9V9 463 aa20.3■□□□□ 0.84
DDR1-235ENST00000428153 GBF1Q92538 1859 aa20.3■□□□□ 0.84
DDR1-235ENST00000428153 KIAA1217Q5T5P2 1943 aa20.29■□□□□ 0.84
DDR1-235ENST00000428153 EIF3JO75822 258 aaKnown RBP20.29■□□□□ 0.84
DDR1-235ENST00000428153 MMP3P08254 477 aa20.29■□□□□ 0.84
DDR1-235ENST00000428153 ATP2A2P16615 1042 aaKnown RBP20.29■□□□□ 0.84
DDR1-235ENST00000428153 TRAF1Q13077 416 aa20.29■□□□□ 0.84
DDR1-235ENST00000428153 CCDC155Q8N6L0 562 aa20.29■□□□□ 0.84
DDR1-235ENST00000428153 RETREG2Q8NC44 543 aa20.29■□□□□ 0.84
DDR1-235ENST00000428153 EXOC6Q8TAG9 804 aa20.29■□□□□ 0.84
DDR1-235ENST00000428153 CAGE1Q8TC20 777 aa20.29■□□□□ 0.84
DDR1-235ENST00000428153 ATXN2LQ8WWM7 1075 aaKnown RBP20.29■□□□□ 0.84
DDR1-235ENST00000428153 TBC1D5Q92609 795 aa20.29■□□□□ 0.84
DDR1-235ENST00000428153 MTMR8Q96EF0 704 aa20.29■□□□□ 0.84
DDR1-235ENST00000428153 SLC9A7Q96T83 725 aa20.29■□□□□ 0.84
DDR1-235ENST00000428153 AMNQ9BXJ7 453 aa20.29■□□□□ 0.84
DDR1-235ENST00000428153 NKX2-4Q9H2Z4 354 aa20.29■□□□□ 0.84
DDR1-235ENST00000428153 COL20A1Q9P218 1284 aa20.29■□□□□ 0.84
DDR1-235ENST00000428153 YBX2Q9Y2T7 364 aaKnown RBP20.29■□□□□ 0.84
DDR1-235ENST00000428153 NCOR1O75376 2440 aa20.29■□□□□ 0.84
DDR1-235ENST00000428153 TANC1Q9C0D5 1861 aa20.28■□□□□ 0.84
DDR1-235ENST00000428153 PARNO95453 639 aaKnown RBP20.28■□□□□ 0.84
DDR1-235ENST00000428153 IQCF3P0C7M6 154 aa20.28■□□□□ 0.84
DDR1-235ENST00000428153 CASTP20810 708 aaKnown RBP20.28■□□□□ 0.84
DDR1-235ENST00000428153 HSD17B4P51659 736 aa20.28■□□□□ 0.84
DDR1-235ENST00000428153 ARHGAP1Q07960 439 aa20.28■□□□□ 0.84
DDR1-235ENST00000428153 SEC23AQ15436 765 aa20.28■□□□□ 0.84
DDR1-235ENST00000428153 ARHGEF16Q5VV41 709 aa20.28■□□□□ 0.84
DDR1-235ENST00000428153 NOD1Q9Y239 953 aa20.28■□□□□ 0.84
DDR1-235ENST00000428153 ZBBXA8MT70 800 aa20.27■□□□□ 0.84
DDR1-235ENST00000428153 DHX16O60231 1041 aaKnown RBP20.27■□□□□ 0.84
DDR1-235ENST00000428153 BAIAP3O94812 1187 aa20.27■□□□□ 0.84
DDR1-235ENST00000428153 RBL2Q08999 1139 aa20.27■□□□□ 0.84
DDR1-235ENST00000428153 TRDNQ13061 729 aa20.27■□□□□ 0.84
DDR1-235ENST00000428153 ADGRE1Q14246 886 aa20.27■□□□□ 0.84
DDR1-235ENST00000428153 DGKDQ16760 1214 aa20.27■□□□□ 0.84
DDR1-235ENST00000428153 PPP2R2DQ66LE6 453 aa20.27■□□□□ 0.84
DDR1-235ENST00000428153 KCNV1Q6PIU1 500 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms