RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 RAD50Q92878 1312 aa11.96□□□□□ -0.49
HDLBP-213ENST00000427007 SUPT20HL2P0C7V6 817 aa11.96□□□□□ -0.49
HDLBP-213ENST00000427007 TXNP10599 105 aaKnown RBP11.96□□□□□ -0.49
HDLBP-213ENST00000427007 MYOGP15173 224 aa11.96□□□□□ -0.49
HDLBP-213ENST00000427007 IGFBP4P22692 258 aa11.96□□□□□ -0.49
HDLBP-213ENST00000427007 ADGRE1Q14246 886 aa11.96□□□□□ -0.49
HDLBP-213ENST00000427007 CCDC85BQ15834 202 aaPredicted RBP11.96□□□□□ -0.49
HDLBP-213ENST00000427007 NBPF20Q3BBV1 942 aa11.96□□□□□ -0.49
HDLBP-213ENST00000427007 BRDTQ58F21 947 aaPredicted RBP11.96□□□□□ -0.49
HDLBP-213ENST00000427007 IQCA1Q86XH1 822 aa11.96□□□□□ -0.49
HDLBP-213ENST00000427007 DGKHQ86XP1 1220 aa11.96□□□□□ -0.49
HDLBP-213ENST00000427007 RPUSD2Q8IZ73 545 aaKnown RBP11.96□□□□□ -0.49
HDLBP-213ENST00000427007 SCFD2Q8WU76 684 aa11.96□□□□□ -0.49
HDLBP-213ENST00000427007 VWCEQ96DN2 955 aa11.96□□□□□ -0.49
HDLBP-213ENST00000427007 KAT14Q9H8E8 782 aa11.96□□□□□ -0.49
HDLBP-213ENST00000427007 SLC28A3Q9HAS3 691 aa11.96□□□□□ -0.49
HDLBP-213ENST00000427007 SLC4A7Q9Y6M7 1214 aa11.96□□□□□ -0.49
HDLBP-213ENST00000427007 CUL9Q8IWT3 2517 aa11.96□□□□□ -0.5
HDLBP-213ENST00000427007 SCN10AQ9Y5Y9 1956 aa11.96□□□□□ -0.5
HDLBP-213ENST00000427007 CHD9Q3L8U1 2897 aa11.95□□□□□ -0.5
HDLBP-213ENST00000427007 NKRFO15226 690 aaKnown RBP eCLIP11.95□□□□□ -0.51e-8■■□□□ 12.2
HDLBP-213ENST00000427007 DHX16O60231 1041 aaKnown RBP11.95□□□□□ -0.5
HDLBP-213ENST00000427007 NUCB1Q02818 461 aa11.95□□□□□ -0.5
HDLBP-213ENST00000427007 TTLL4Q14679 1199 aa11.95□□□□□ -0.5
HDLBP-213ENST00000427007 ADGRF4Q8IZF3 695 aa11.95□□□□□ -0.5
HDLBP-213ENST00000427007 EXOC6Q8TAG9 804 aa11.95□□□□□ -0.5
HDLBP-213ENST00000427007 TAAR1Q96RJ0 339 aa11.95□□□□□ -0.5
HDLBP-213ENST00000427007 ZSCAN10Q96SZ4 725 aaPredicted RBP11.95□□□□□ -0.5
HDLBP-213ENST00000427007 OSBPL3Q9H4L5 887 aa11.95□□□□□ -0.5
HDLBP-213ENST00000427007 VAT1LQ9HCJ6 419 aa11.95□□□□□ -0.5
HDLBP-213ENST00000427007 COL20A1Q9P218 1284 aa11.95□□□□□ -0.5
HDLBP-213ENST00000427007 KIAA1217Q5T5P2 1943 aa11.95□□□□□ -0.5
HDLBP-213ENST00000427007 ABCB11O95342 1321 aa11.94□□□□□ -0.5
HDLBP-213ENST00000427007 A6NJR5 290 aa11.94□□□□□ -0.5
HDLBP-213ENST00000427007 B4DLN1 442 aa11.94□□□□□ -0.5
HDLBP-213ENST00000427007 MRPL12P52815 198 aaKnown RBP11.94□□□□□ -0.5
HDLBP-213ENST00000427007 AAMPQ13685 434 aa11.94□□□□□ -0.5
HDLBP-213ENST00000427007 IMMTQ16891 758 aaKnown RBP11.94□□□□□ -0.5
HDLBP-213ENST00000427007 LY6KQ17RY6 165 aa11.94□□□□□ -0.5
HDLBP-213ENST00000427007 QRICH1Q2TAL8 776 aa11.94□□□□□ -0.5
HDLBP-213ENST00000427007 CCDC178Q5BJE1 867 aa11.94□□□□□ -0.5
HDLBP-213ENST00000427007 TJAP1Q5JTD0 557 aa11.94□□□□□ -0.5
HDLBP-213ENST00000427007 PPP2R2DQ66LE6 453 aa11.94□□□□□ -0.5
HDLBP-213ENST00000427007 SEPT14Q6ZU15 432 aa11.94□□□□□ -0.5
HDLBP-213ENST00000427007 CHST3Q7LGC8 479 aa11.94□□□□□ -0.5
HDLBP-213ENST00000427007 ENAHQ8N8S7 591 aaPredicted RBP11.94□□□□□ -0.5
HDLBP-213ENST00000427007 SYTL5Q8TDW5 730 aaPredicted RBP11.94□□□□□ -0.5
HDLBP-213ENST00000427007 SYMPKQ92797 1274 aaKnown RBP11.94□□□□□ -0.5
HDLBP-213ENST00000427007 ZSWIM5Q9P217 1185 aa11.94□□□□□ -0.5
HDLBP-213ENST00000427007 PFKMP08237 780 aa11.93□□□□□ -0.5
HDLBP-213ENST00000427007 PARP1P09874 1014 aaKnown RBP11.93□□□□□ -0.5
HDLBP-213ENST00000427007 ATP2A2P16615 1042 aaKnown RBP11.93□□□□□ -0.5
HDLBP-213ENST00000427007 ASPRV1Q53RT3 343 aa11.93□□□□□ -0.5
HDLBP-213ENST00000427007 NFRKBQ6P4R8 1299 aa11.93□□□□□ -0.5
HDLBP-213ENST00000427007 FBXO11Q86XK2 927 aa11.93□□□□□ -0.5
HDLBP-213ENST00000427007 MICALL1Q8N3F8 863 aa11.93□□□□□ -0.5
HDLBP-213ENST00000427007 RGS22Q8NE09 1264 aa11.93□□□□□ -0.5
HDLBP-213ENST00000427007 AFG1LQ8WV93 481 aa11.93□□□□□ -0.5
HDLBP-213ENST00000427007 DSCC1Q9BVC3 393 aa11.93□□□□□ -0.5
HDLBP-213ENST00000427007 IL25Q9H293 177 aa11.93□□□□□ -0.5
HDLBP-213ENST00000427007 NOD1Q9Y239 953 aa11.93□□□□□ -0.5
HDLBP-213ENST00000427007 PTPRSQ13332 1948 aa11.92□□□□□ -0.5
HDLBP-213ENST00000427007 HIP1O00291 1037 aa11.92□□□□□ -0.5
HDLBP-213ENST00000427007 KPNA6O60684 536 aa11.92□□□□□ -0.5
HDLBP-213ENST00000427007 CFBP00751 764 aa11.92□□□□□ -0.5
HDLBP-213ENST00000427007 GH1P01241 217 aa11.92□□□□□ -0.5
HDLBP-213ENST00000427007 MMP3P08254 477 aa11.92□□□□□ -0.5
HDLBP-213ENST00000427007 IQCF3P0C7M6 154 aa11.92□□□□□ -0.5
HDLBP-213ENST00000427007 EIF2AK2P19525 551 aaKnown RBP11.92□□□□□ -0.5
HDLBP-213ENST00000427007 ARHGAP1Q07960 439 aa11.92□□□□□ -0.5
HDLBP-213ENST00000427007 ARHGEF16Q5VV41 709 aa11.92□□□□□ -0.5
HDLBP-213ENST00000427007 CCDC62Q6P9F0 684 aa11.92□□□□□ -0.5
HDLBP-213ENST00000427007 MCF2L2Q86YR7 1114 aa11.92□□□□□ -0.5
HDLBP-213ENST00000427007 STAG2Q8N3U4 1231 aa11.92□□□□□ -0.5
HDLBP-213ENST00000427007 RETREG2Q8NC44 543 aa11.92□□□□□ -0.5
HDLBP-213ENST00000427007 NSUN6Q8TEA1 469 aaKnown RBP11.92□□□□□ -0.5
HDLBP-213ENST00000427007 ANKS1AQ92625 1134 aa11.92□□□□□ -0.5
HDLBP-213ENST00000427007 RMDN3Q96TC7 470 aa11.92□□□□□ -0.5
HDLBP-213ENST00000427007 UBAC1Q9BSL1 405 aa11.92□□□□□ -0.5
HDLBP-213ENST00000427007 KRT23Q9C075 422 aa11.92□□□□□ -0.5
HDLBP-213ENST00000427007 FTOQ9C0B1 505 aaKnown RBP eCLIP11.92□□□□□ -0.53e-8■■■■□ 24.2
HDLBP-213ENST00000427007 JMJD4Q9H9V9 463 aa11.92□□□□□ -0.5
HDLBP-213ENST00000427007 CERS4Q9HA82 394 aa11.92□□□□□ -0.5
HDLBP-213ENST00000427007 THEGQ9P2T0 379 aa11.92□□□□□ -0.5
HDLBP-213ENST00000427007 PCDHA11Q9Y5I1 949 aa11.92□□□□□ -0.5
HDLBP-213ENST00000427007 RBAK-RBAKDNI3L0D1 243 aa11.91□□□□□ -0.5
HDLBP-213ENST00000427007 RFXAPO00287 272 aa11.91□□□□□ -0.5
HDLBP-213ENST00000427007 PITPNM1O00562 1244 aa11.91□□□□□ -0.5
HDLBP-213ENST00000427007 CA3P07451 260 aa11.91□□□□□ -0.5
HDLBP-213ENST00000427007 ACTN1P12814 892 aa11.91□□□□□ -0.5
HDLBP-213ENST00000427007 RFC2P35250 354 aa11.91□□□□□ -0.5
HDLBP-213ENST00000427007 NT5C2P49902 561 aa11.91□□□□□ -0.5
HDLBP-213ENST00000427007 PTPN11Q06124 597 aaPredicted RBP11.91□□□□□ -0.5
HDLBP-213ENST00000427007 STXBP2Q15833 593 aa11.91□□□□□ -0.5
HDLBP-213ENST00000427007 PTGISQ16647 500 aa11.91□□□□□ -0.5
HDLBP-213ENST00000427007 TMEM67Q5HYA8 995 aa11.91□□□□□ -0.5
HDLBP-213ENST00000427007 IFIT1BQ5T764 474 aaKnown RBP11.91□□□□□ -0.5
HDLBP-213ENST00000427007 GDF6Q6KF10 455 aaPredicted RBP11.91□□□□□ -0.5
HDLBP-213ENST00000427007 CYB5R4Q7L1T6 521 aa11.91□□□□□ -0.5
HDLBP-213ENST00000427007 CTNNA3Q9UI47 895 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms