RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 LACRTQ9GZZ8 138 aa14.92□□□□□ -0.02
USP42-203ENST00000426246 PRPF3O43395 683 aaKnown RBP14.92□□□□□ -0.02
USP42-203ENST00000426246 MOCS3O95396 460 aa14.92□□□□□ -0.02
USP42-203ENST00000426246 NOP2P46087 812 aaKnown RBP14.92□□□□□ -0.02
USP42-203ENST00000426246 STK4Q13043 487 aa14.92□□□□□ -0.02
USP42-203ENST00000426246 PIGSQ96S52 555 aa14.92□□□□□ -0.02
USP42-203ENST00000426246 ATP8A2Q9NTI2 1148 aa14.92□□□□□ -0.02
USP42-203ENST00000426246 LCMT1Q9UIC8 334 aa14.92□□□□□ -0.02
USP42-203ENST00000426246 C10orf71Q711Q0 1435 aa14.91□□□□□ -0.02
USP42-203ENST00000426246 GUCY2FP51841 1108 aa14.91□□□□□ -0.02
USP42-203ENST00000426246 PLS1Q14651 629 aa14.91□□□□□ -0.02
USP42-203ENST00000426246 SEC23AQ15436 765 aa14.91□□□□□ -0.02
USP42-203ENST00000426246 CNOT6LQ96LI5 555 aaKnown RBP14.91□□□□□ -0.02
USP42-203ENST00000426246 MTA3Q9BTC8 594 aa14.91□□□□□ -0.02
USP42-203ENST00000426246 SAR1BQ9Y6B6 198 aa14.91□□□□□ -0.02
USP42-203ENST00000426246 TRAF5O00463 557 aa14.91□□□□□ -0.02
USP42-203ENST00000426246 CACNB3P54284 484 aa14.91□□□□□ -0.02
USP42-203ENST00000426246 SBK1Q52WX2 424 aa14.91□□□□□ -0.02
USP42-203ENST00000426246 STYK1Q6J9G0 422 aa14.91□□□□□ -0.02
USP42-203ENST00000426246 TEX11Q8IYF3 940 aa14.91□□□□□ -0.02
USP42-203ENST00000426246 FUT8Q9BYC5 575 aa14.91□□□□□ -0.02
USP42-203ENST00000426246 GOLPH3Q9H4A6 298 aa14.91□□□□□ -0.02
USP42-203ENST00000426246 STK32BQ9NY57 414 aa14.91□□□□□ -0.02
USP42-203ENST00000426246 HLTFQ14527 1009 aaKnown RBP eCLIP14.91□□□□□ -0.02
USP42-203ENST00000426246 ADAT2Q7Z6V5 191 aaKnown RBP14.91□□□□□ -0.02
USP42-203ENST00000426246 KIFC2Q96AC6 838 aa14.91□□□□□ -0.02
USP42-203ENST00000426246 RBM28Q9NW13 759 aaKnown RBP14.91□□□□□ -0.02
USP42-203ENST00000426246 TTF2Q9UNY4 1162 aaKnown RBP14.91□□□□□ -0.02
USP42-203ENST00000426246 GTPBP6O43824 516 aaPredicted RBP14.9□□□□□ -0.02
USP42-203ENST00000426246 CCDC70Q6NSX1 233 aa14.9□□□□□ -0.02
USP42-203ENST00000426246 SLC30A10Q6XR72 485 aa14.9□□□□□ -0.02
USP42-203ENST00000426246 FAM163AQ96GL9 167 aaPredicted RBP14.9□□□□□ -0.02
USP42-203ENST00000426246 GAKO14976 1311 aa14.9□□□□□ -0.02
USP42-203ENST00000426246 TMCO5BA8MYB1 307 aa14.9□□□□□ -0.02
USP42-203ENST00000426246 KRT86O43790 486 aa14.9□□□□□ -0.02
USP42-203ENST00000426246 RASSF7Q02833 373 aa14.9□□□□□ -0.02
USP42-203ENST00000426246 CERS5Q8N5B7 392 aa14.9□□□□□ -0.02
USP42-203ENST00000426246 CALML4Q96GE6 196 aa14.9□□□□□ -0.02
USP42-203ENST00000426246 COA1Q9GZY4 146 aa14.9□□□□□ -0.02
USP42-203ENST00000426246 ROBO3Q96MS0 1386 aa14.9□□□□□ -0.02
USP42-203ENST00000426246 TAL1P17542 331 aaPredicted RBP14.9□□□□□ -0.02
USP42-203ENST00000426246 CHRNA5P30532 468 aa14.9□□□□□ -0.02
USP42-203ENST00000426246 KSR1Q8IVT5 923 aa14.9□□□□□ -0.02
USP42-203ENST00000426246 TBCKQ8TEA7 893 aa14.9□□□□□ -0.02
USP42-203ENST00000426246 BMP2KQ9NSY1 1161 aaPredicted RBP14.9□□□□□ -0.02
USP42-203ENST00000426246 RMND1Q9NWS8 449 aa14.9□□□□□ -0.02
USP42-203ENST00000426246 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.9□□□□□ -0.02
USP42-203ENST00000426246 GPR75-ASB3A0A0A6YYF3 556 aa14.89□□□□□ -0.03
USP42-203ENST00000426246 TXLNBQ8N3L3 684 aa14.89□□□□□ -0.03
USP42-203ENST00000426246 TRIML1Q8N9V2 468 aa14.89□□□□□ -0.03
USP42-203ENST00000426246 EYA3Q99504 573 aa14.89□□□□□ -0.03
USP42-203ENST00000426246 MXD3Q9BW11 206 aa14.89□□□□□ -0.03
USP42-203ENST00000426246 ANKZF1Q9H8Y5 726 aa14.89□□□□□ -0.03
USP42-203ENST00000426246 MYH1P12882 1939 aa14.89□□□□□ -0.03
USP42-203ENST00000426246 CALM1P0DP23 149 aa14.89□□□□□ -0.03
USP42-203ENST00000426246 CALM2P0DP24 149 aa14.89□□□□□ -0.03
USP42-203ENST00000426246 CALM3P0DP25 149 aa14.89□□□□□ -0.03
USP42-203ENST00000426246 CYP2C19P33261 490 aa14.89□□□□□ -0.03
USP42-203ENST00000426246 RHBDL3P58872 404 aa14.89□□□□□ -0.03
USP42-203ENST00000426246 SPAG1Q07617 926 aa14.89□□□□□ -0.03
USP42-203ENST00000426246 PRPF4BQ13523 1007 aaKnown RBP14.89□□□□□ -0.03
USP42-203ENST00000426246 MFSD14BQ5SR56 506 aa14.89□□□□□ -0.03
USP42-203ENST00000426246 KLHL7Q8IXQ5 586 aa14.89□□□□□ -0.03
USP42-203ENST00000426246 GLIS3Q8NEA6 775 aa14.89□□□□□ -0.03
USP42-203ENST00000426246 TRIM31Q9BZY9 425 aa14.89□□□□□ -0.03
USP42-203ENST00000426246 DISC1Q9NRI5 854 aa14.89□□□□□ -0.03
USP42-203ENST00000426246 SAMM50Q9Y512 469 aa14.89□□□□□ -0.03
USP42-203ENST00000426246 PSME4Q14997 1843 aa14.89□□□□□ -0.03
USP42-203ENST00000426246 CYLC1P35663 651 aaPredicted RBP14.89□□□□□ -0.03
USP42-203ENST00000426246 TBX2Q13207 712 aaPredicted RBP14.89□□□□□ -0.03
USP42-203ENST00000426246 RAPGEF1Q13905 1077 aa14.89□□□□□ -0.03
USP42-203ENST00000426246 ANKRD40Q6AI12 368 aa14.89□□□□□ -0.03
USP42-203ENST00000426246 SNX29Q8TEQ0 813 aa14.89□□□□□ -0.03
USP42-203ENST00000426246 IFIH1Q9BYX4 1025 aaKnown RBP14.89□□□□□ -0.03
USP42-203ENST00000426246 FTCDO95954 541 aa14.88□□□□□ -0.03
USP42-203ENST00000426246 CALML3P27482 149 aa14.88□□□□□ -0.03
USP42-203ENST00000426246 SARSP49591 514 aaKnown RBP14.88□□□□□ -0.03
USP42-203ENST00000426246 ZNF658Q5TYW1 1059 aaPredicted RBP14.88□□□□□ -0.03
USP42-203ENST00000426246 DPP8Q6V1X1 898 aaPredicted RBP14.88□□□□□ -0.03
USP42-203ENST00000426246 MAEAQ7L5Y9 396 aa14.88□□□□□ -0.03
USP42-203ENST00000426246 POTEDQ86YR6 584 aa14.88□□□□□ -0.03
USP42-203ENST00000426246 MS4A14Q96JA4 679 aa14.88□□□□□ -0.03
USP42-203ENST00000426246 PANX2Q96RD6 677 aa14.88□□□□□ -0.03
USP42-203ENST00000426246 EHD4Q9H223 541 aa14.88□□□□□ -0.03
USP42-203ENST00000426246 NHEJ1Q9H9Q4 299 aaPredicted RBP14.88□□□□□ -0.03
USP42-203ENST00000426246 CWC15Q9P013 229 aaKnown RBP14.88□□□□□ -0.03
USP42-203ENST00000426246 PKD2L1Q9P0L9 805 aa14.88□□□□□ -0.03
USP42-203ENST00000426246 CNTNAP5Q8WYK1 1306 aa14.88□□□□□ -0.03
USP42-203ENST00000426246 LRRIQ3A6PVS8 624 aaPredicted RBP14.88□□□□□ -0.03
USP42-203ENST00000426246 MEIS1O00470 390 aa14.88□□□□□ -0.03
USP42-203ENST00000426246 ORC4O43929 436 aa14.88□□□□□ -0.03
USP42-203ENST00000426246 PCP11498 1178 aaKnown RBP14.88□□□□□ -0.03
USP42-203ENST00000426246 NFRKBQ6P4R8 1299 aa14.88□□□□□ -0.03
USP42-203ENST00000426246 KCTD1Q719H9 257 aa14.88□□□□□ -0.03
USP42-203ENST00000426246 MB21D1Q8N884 522 aa14.88□□□□□ -0.03
USP42-203ENST00000426246 ARPP21Q9UBL0 812 aaPredicted RBP14.88□□□□□ -0.03
USP42-203ENST00000426246 GSTO1P78417 241 aa14.87□□□□□ -0.03
USP42-203ENST00000426246 ATP2C1P98194 919 aaPredicted RBP14.87□□□□□ -0.03
USP42-203ENST00000426246 ACBD3Q9H3P7 528 aa14.87□□□□□ -0.03
USP42-203ENST00000426246 STK36Q9NRP7 1315 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms