RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 CFBP00751 764 aa17.85■□□□□ 0.45
SHOX2-202ENST00000425436 SCG2P13521 617 aa17.85■□□□□ 0.45
SHOX2-202ENST00000425436 CALML3P27482 149 aa17.85■□□□□ 0.45
SHOX2-202ENST00000425436 RGS2P41220 211 aa17.85■□□□□ 0.45
SHOX2-202ENST00000425436 CNTN2Q02246 1040 aa17.85■□□□□ 0.45
SHOX2-202ENST00000425436 COL13A1Q5TAT6 717 aaPredicted RBP17.85■□□□□ 0.45
SHOX2-202ENST00000425436 TYW1BQ6NUM6 668 aa17.85■□□□□ 0.45
SHOX2-202ENST00000425436 SLC30A10Q6XR72 485 aa17.85■□□□□ 0.45
SHOX2-202ENST00000425436 SOCS4Q8WXH5 440 aa17.85■□□□□ 0.45
SHOX2-202ENST00000425436 AIFM3Q96NN9 605 aa17.85■□□□□ 0.45
SHOX2-202ENST00000425436 PLXNA1Q9UIW2 1896 aa17.85■□□□□ 0.45
SHOX2-202ENST00000425436 ELNP15502 786 aa17.84■□□□□ 0.45
SHOX2-202ENST00000425436 RPS6P62753 249 aaKnown RBP17.84■□□□□ 0.45
SHOX2-202ENST00000425436 TRAF1Q13077 416 aa17.84■□□□□ 0.45
SHOX2-202ENST00000425436 CCL14Q16627 93 aa17.84■□□□□ 0.45
SHOX2-202ENST00000425436 FAM173BQ6P4H8 233 aa17.84■□□□□ 0.45
SHOX2-202ENST00000425436 DDX19AQ9NUU7 478 aaKnown RBP17.84■□□□□ 0.45
SHOX2-202ENST00000425436 RTEL1Q9NZ71 1219 aa17.84■□□□□ 0.45
SHOX2-202ENST00000425436 DNAJC25-GNG10A0A024R161 153 aa17.83■□□□□ 0.45
SHOX2-202ENST00000425436 POTEB2H3BUK9 544 aa17.83■□□□□ 0.45
SHOX2-202ENST00000425436 STXBP3O00186 592 aa17.83■□□□□ 0.45
SHOX2-202ENST00000425436 DEXIO95424 95 aa17.83■□□□□ 0.45
SHOX2-202ENST00000425436 XBP1P17861 261 aa17.83■□□□□ 0.45
SHOX2-202ENST00000425436 HOXA13P31271 388 aaPredicted RBP17.83■□□□□ 0.45
SHOX2-202ENST00000425436 NAPAP54920 295 aa17.83■□□□□ 0.45
SHOX2-202ENST00000425436 PRMT2P55345 433 aa17.83■□□□□ 0.45
SHOX2-202ENST00000425436 SAFBQ15424 915 aaKnown RBP eCLIP17.83■□□□□ 0.45
SHOX2-202ENST00000425436 ZNF792Q3KQV3 632 aa17.83■□□□□ 0.45
SHOX2-202ENST00000425436 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.83■□□□□ 0.45
SHOX2-202ENST00000425436 MCF2L2Q86YR7 1114 aa17.83■□□□□ 0.45
SHOX2-202ENST00000425436 TSPY26PQ9H489 355 aa17.83■□□□□ 0.45
SHOX2-202ENST00000425436 BARHL2Q9NY43 387 aa17.83■□□□□ 0.45
SHOX2-202ENST00000425436 FLRT1Q9NZU1 646 aa17.83■□□□□ 0.45
SHOX2-202ENST00000425436 PFASO15067 1338 aa17.83■□□□□ 0.44
SHOX2-202ENST00000425436 ADCY3O60266 1144 aa17.82■□□□□ 0.44
SHOX2-202ENST00000425436 YEATS4O95619 227 aa17.82■□□□□ 0.44
SHOX2-202ENST00000425436 NASPP49321 788 aaPredicted RBP17.82■□□□□ 0.44
SHOX2-202ENST00000425436 IRF5Q13568 498 aa17.82■□□□□ 0.44
SHOX2-202ENST00000425436 MCOLN1Q9GZU1 580 aa17.82■□□□□ 0.44
SHOX2-202ENST00000425436 PSTPIP2Q9H939 334 aa17.82■□□□□ 0.44
SHOX2-202ENST00000425436 POLR3EQ9NVU0 708 aa17.82■□□□□ 0.44
SHOX2-202ENST00000425436 VPS54Q9P1Q0 977 aa17.82■□□□□ 0.44
SHOX2-202ENST00000425436 SOWAHBA6NEL2 793 aa17.82■□□□□ 0.44
SHOX2-202ENST00000425436 XRCC5P13010 732 aaKnown RBP17.82■□□□□ 0.44
SHOX2-202ENST00000425436 GUCY1B3Q02153 619 aa17.82■□□□□ 0.44
SHOX2-202ENST00000425436 GNL2Q13823 731 aaKnown RBP17.82■□□□□ 0.44
SHOX2-202ENST00000425436 PKN2Q16513 984 aaKnown RBP17.82■□□□□ 0.44
SHOX2-202ENST00000425436 KRT40Q6A162 431 aa17.82■□□□□ 0.44
SHOX2-202ENST00000425436 FBXO46Q6PJ61 603 aaPredicted RBP17.82■□□□□ 0.44
SHOX2-202ENST00000425436 USP17L6PQ6QN14 398 aa17.82■□□□□ 0.44
SHOX2-202ENST00000425436 FAM133AQ8N9E0 248 aa17.82■□□□□ 0.44
SHOX2-202ENST00000425436 KCNG4Q8TDN1 519 aa17.82■□□□□ 0.44
SHOX2-202ENST00000425436 SH3TC2Q8TF17 1288 aa17.82■□□□□ 0.44
SHOX2-202ENST00000425436 SHISA4Q96DD7 197 aa17.82■□□□□ 0.44
SHOX2-202ENST00000425436 MAML3Q96JK9 1138 aa17.82■□□□□ 0.44
SHOX2-202ENST00000425436 APBA2Q99767 749 aa17.82■□□□□ 0.44
SHOX2-202ENST00000425436 GJB4Q9NTQ9 266 aa17.82■□□□□ 0.44
SHOX2-202ENST00000425436 SLC5A4Q9NY91 659 aa17.82■□□□□ 0.44
SHOX2-202ENST00000425436 COL20A1Q9P218 1284 aa17.82■□□□□ 0.44
SHOX2-202ENST00000425436 ZNF236Q9UL36 1845 aa17.82■□□□□ 0.44
SHOX2-202ENST00000425436 LCTP09848 1927 aa17.81■□□□□ 0.44
SHOX2-202ENST00000425436 SMCO2A6NFE2 343 aa17.81■□□□□ 0.44
SHOX2-202ENST00000425436 GCOM1H8Y6P7 765 aaPredicted RBP17.81■□□□□ 0.44
SHOX2-202ENST00000425436 HOXC6P09630 235 aa17.81■□□□□ 0.44
SHOX2-202ENST00000425436 POLR2MP0CAP2 368 aa17.81■□□□□ 0.44
SHOX2-202ENST00000425436 FOSBP53539 338 aa17.81■□□□□ 0.44
SHOX2-202ENST00000425436 TRIM32Q13049 653 aa17.81■□□□□ 0.44
SHOX2-202ENST00000425436 FCHSD1Q86WN1 690 aa17.81■□□□□ 0.44
SHOX2-202ENST00000425436 SYTL5Q8TDW5 730 aaPredicted RBP17.81■□□□□ 0.44
SHOX2-202ENST00000425436 TRIB2Q92519 343 aa17.81■□□□□ 0.44
SHOX2-202ENST00000425436 FGD4Q96M96 766 aa17.81■□□□□ 0.44
SHOX2-202ENST00000425436 TAAR1Q96RJ0 339 aa17.81■□□□□ 0.44
SHOX2-202ENST00000425436 RBBP6Q7Z6E9 1792 aaKnown RBP17.81■□□□□ 0.44
SHOX2-202ENST00000425436 MEIS2O14770 477 aa17.8■□□□□ 0.44
SHOX2-202ENST00000425436 ADAMTS3O15072 1205 aa17.8■□□□□ 0.44
SHOX2-202ENST00000425436 U2AF2P26368 475 aaKnown RBP eCLIP17.8■□□□□ 0.44
SHOX2-202ENST00000425436 GRK4P32298 578 aa17.8■□□□□ 0.44
SHOX2-202ENST00000425436 HSD17B4P51659 736 aa17.8■□□□□ 0.44
SHOX2-202ENST00000425436 UBE2SQ16763 222 aa17.8■□□□□ 0.44
SHOX2-202ENST00000425436 MYSM1Q5VVJ2 828 aa17.8■□□□□ 0.44
SHOX2-202ENST00000425436 BICD2Q8TD16 824 aa17.8■□□□□ 0.44
SHOX2-202ENST00000425436 BIN2Q9UBW5 565 aaPredicted RBP17.8■□□□□ 0.44
SHOX2-202ENST00000425436 ASTN1O14525 1302 aa17.8■□□□□ 0.44
SHOX2-202ENST00000425436 hCG_1984214I3L0E3 225 aa17.79■□□□□ 0.44
SHOX2-202ENST00000425436 MYCP01106 439 aaPredicted RBP17.79■□□□□ 0.44
SHOX2-202ENST00000425436 CYP2C19P33261 490 aa17.79■□□□□ 0.44
SHOX2-202ENST00000425436 SLC9C1Q4G0N8 1177 aa17.79■□□□□ 0.44
SHOX2-202ENST00000425436 ZNF713Q8N859 430 aaPredicted RBP17.79■□□□□ 0.44
SHOX2-202ENST00000425436 PXYLP1Q8TE99 480 aa17.79■□□□□ 0.44
SHOX2-202ENST00000425436 USP28Q96RU2 1077 aa17.79■□□□□ 0.44
SHOX2-202ENST00000425436 NUP62CLQ9H1M0 184 aa17.79■□□□□ 0.44
SHOX2-202ENST00000425436 DIS3Q9Y2L1 958 aaKnown RBP17.79■□□□□ 0.44
SHOX2-202ENST00000425436 MCM3APO60318 1980 aa17.79■□□□□ 0.44
SHOX2-202ENST00000425436 A0A1W2PQ27 194 aa17.78■□□□□ 0.44
SHOX2-202ENST00000425436 A0A1W2PQ64 194 aa17.78■□□□□ 0.44
SHOX2-202ENST00000425436 A0A1W2PQD8 194 aa17.78■□□□□ 0.44
SHOX2-202ENST00000425436 CTAGE5O15320 804 aa17.78■□□□□ 0.44
SHOX2-202ENST00000425436 ADCY7P51828 1080 aa17.78■□□□□ 0.44
SHOX2-202ENST00000425436 SF3A1Q15459 793 aaKnown RBP17.78■□□□□ 0.44
SHOX2-202ENST00000425436 UVSSAQ2YD98 709 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms