RNA–Protein interactions for RNA: ENST00000424307.5

PMS1-210, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-210ENST00000424307 ZNF623O75123 536 aa2.39□□□□□ -2.03
PMS1-210ENST00000424307 CLEC3AO75596 197 aa2.39□□□□□ -2.03
PMS1-210ENST00000424307 ATE1O95260 518 aa2.39□□□□□ -2.03
PMS1-210ENST00000424307 GLI4P10075 376 aa2.39□□□□□ -2.03
PMS1-210ENST00000424307 ACRP10323 421 aa2.39□□□□□ -2.03
PMS1-210ENST00000424307 RAG1P15918 1043 aa2.39□□□□□ -2.03
PMS1-210ENST00000424307 ZNF16P17020 682 aaPredicted RBP2.39□□□□□ -2.03
PMS1-210ENST00000424307 EIF4A3P38919 411 aaKnown RBP2.39□□□□□ -2.03
PMS1-210ENST00000424307 RACK1P63244 317 aaKnown RBP2.39□□□□□ -2.03
PMS1-210ENST00000424307 ICAM4Q14773 271 aa2.39□□□□□ -2.03
PMS1-210ENST00000424307 GK5Q6ZS86 529 aa2.39□□□□□ -2.03
PMS1-210ENST00000424307 ARHGEF18Q6ZSZ5 1173 aa2.39□□□□□ -2.03
PMS1-210ENST00000424307 SMARCC2Q8TAQ2 1214 aa2.39□□□□□ -2.03
PMS1-210ENST00000424307 ZNF296Q8WUU4 475 aaPredicted RBP2.39□□□□□ -2.03
PMS1-210ENST00000424307 PRRX2Q99811 253 aa2.39□□□□□ -2.03
PMS1-210ENST00000424307 RSRP1Q9BUV0 290 aa2.39□□□□□ -2.03
PMS1-210ENST00000424307 BACH2Q9BYV9 841 aa2.39□□□□□ -2.03
PMS1-210ENST00000424307 KCNQ5Q9NR82 932 aa2.39□□□□□ -2.03
PMS1-210ENST00000424307 TRBV23OR9-2A0A075B6M9 112 aa2.38□□□□□ -2.03
PMS1-210ENST00000424307 C9IYK1 514 aa2.38□□□□□ -2.03
PMS1-210ENST00000424307 PMLP29590 882 aa2.38□□□□□ -2.03
PMS1-210ENST00000424307 PRKD1Q15139 912 aaPredicted RBP2.38□□□□□ -2.03
PMS1-210ENST00000424307 ZYXQ15942 572 aaKnown RBP2.38□□□□□ -2.03
PMS1-210ENST00000424307 SEZ6Q53EL9 994 aa2.38□□□□□ -2.03
PMS1-210ENST00000424307 ZC3H18Q86VM9 953 aaKnown RBP2.38□□□□□ -2.03
PMS1-210ENST00000424307 TMEM192Q8IY95 271 aa2.38□□□□□ -2.03
PMS1-210ENST00000424307 TXNDC5Q8NBS9 432 aaKnown RBP2.38□□□□□ -2.03
PMS1-210ENST00000424307 ZBTB8AQ96BR9 441 aa2.38□□□□□ -2.03
PMS1-210ENST00000424307 DHRS1Q96LJ7 313 aa2.38□□□□□ -2.03
PMS1-210ENST00000424307 C11orf84Q9BUA3 381 aaPredicted RBP2.38□□□□□ -2.03
PMS1-210ENST00000424307 MRS2Q9HD23 443 aa2.38□□□□□ -2.03
PMS1-210ENST00000424307 FAM86C1Q9NVL1 165 aa2.38□□□□□ -2.03
PMS1-210ENST00000424307 GMIPQ9P107 970 aa2.38□□□□□ -2.03
PMS1-210ENST00000424307 PLA2G2DQ9UNK4 145 aa2.38□□□□□ -2.03
PMS1-210ENST00000424307 A0A087WZG4 1122 aa2.37□□□□□ -2.03
PMS1-210ENST00000424307 SHOXO15266 292 aa2.37□□□□□ -2.03
PMS1-210ENST00000424307 PEX11BO96011 259 aa2.37□□□□□ -2.03
PMS1-210ENST00000424307 L1CAMP32004 1257 aa2.37□□□□□ -2.03
PMS1-210ENST00000424307 CTSKP43235 329 aa2.37□□□□□ -2.03
PMS1-210ENST00000424307 RUFY4Q6ZNE9 571 aa2.37□□□□□ -2.03
PMS1-210ENST00000424307 KRTAP5-2Q701N4 177 aa2.37□□□□□ -2.03
PMS1-210ENST00000424307 USP48Q86UV5 1035 aa2.37□□□□□ -2.03
PMS1-210ENST00000424307 KLHL36Q8N4N3 616 aa2.37□□□□□ -2.03
PMS1-210ENST00000424307 LRRC3Q9BY71 257 aa2.37□□□□□ -2.03
PMS1-210ENST00000424307 AURKAIP1Q9NWT8 199 aaPredicted RBP2.37□□□□□ -2.03
PMS1-210ENST00000424307 GGT7Q9UJ14 662 aa2.37□□□□□ -2.03
PMS1-210ENST00000424307 SF3B6Q9Y3B4 125 aaKnown RBP2.37□□□□□ -2.03
PMS1-210ENST00000424307 MEIS1O00470 390 aa2.37□□□□□ -2.03
PMS1-210ENST00000424307 FGF10O15520 208 aaPredicted RBP2.37□□□□□ -2.03
PMS1-210ENST00000424307 RECKO95980 971 aa2.37□□□□□ -2.03
PMS1-210ENST00000424307 ANKRD39Q53RE8 183 aa2.37□□□□□ -2.03
PMS1-210ENST00000424307 RTP2Q5QGT7 225 aa2.37□□□□□ -2.03
PMS1-210ENST00000424307 RNF207Q6ZRF8 634 aa2.37□□□□□ -2.03
PMS1-210ENST00000424307 EDAQ92838 391 aa2.37□□□□□ -2.03
PMS1-210ENST00000424307 ATG4CQ96DT6 458 aa2.37□□□□□ -2.03
PMS1-210ENST00000424307 ZNF503Q96F45 646 aa2.37□□□□□ -2.03
PMS1-210ENST00000424307 NOX5Q96PH1 765 aa2.37□□□□□ -2.03
PMS1-210ENST00000424307 SLC9A7Q96T83 725 aa2.37□□□□□ -2.03
PMS1-210ENST00000424307 TRIM8Q9BZR9 551 aa2.37□□□□□ -2.03
PMS1-210ENST00000424307 CNNM2Q9H8M5 875 aa2.37□□□□□ -2.03
PMS1-210ENST00000424307 PPT2Q9UMR5 302 aa2.37□□□□□ -2.03
PMS1-210ENST00000424307 A0A087X1B8 175 aa2.36□□□□□ -2.03
PMS1-210ENST00000424307 FANCCQ00597 558 aa2.36□□□□□ -2.03
PMS1-210ENST00000424307 PRR31Q5SQ13 230 aa2.36□□□□□ -2.03
PMS1-210ENST00000424307 C9orf131Q5VYM1 1079 aa2.36□□□□□ -2.03
PMS1-210ENST00000424307 TDRD10Q5VZ19 366 aaKnown RBP2.36□□□□□ -2.03
PMS1-210ENST00000424307 LIMS2Q7Z4I7 341 aa2.36□□□□□ -2.03
PMS1-210ENST00000424307 PPFIBP1Q86W92 1011 aa2.36□□□□□ -2.03
PMS1-210ENST00000424307 DCP2Q8IU60 420 aaKnown RBP2.36□□□□□ -2.03
PMS1-210ENST00000424307 RELL1Q8IUW5 271 aa2.36□□□□□ -2.03
PMS1-210ENST00000424307 PTCHD1Q96NR3 888 aa2.36□□□□□ -2.03
PMS1-210ENST00000424307 SLC12A9Q9BXP2 914 aa2.36□□□□□ -2.03
PMS1-210ENST00000424307 FBXL21Q9UKT6 434 aa2.36□□□□□ -2.03
PMS1-210ENST00000424307 GPR42O15529 346 aa2.36□□□□□ -2.03
PMS1-210ENST00000424307 ZNF202O95125 648 aa2.36□□□□□ -2.03
PMS1-210ENST00000424307 ZNF362Q5T0B9 420 aaPredicted RBP2.36□□□□□ -2.03
PMS1-210ENST00000424307 RCSD1Q6JBY9 416 aa2.36□□□□□ -2.03
PMS1-210ENST00000424307 CCDC81Q6ZN84 652 aa2.36□□□□□ -2.03
PMS1-210ENST00000424307 MIB1Q86YT6 1006 aa2.36□□□□□ -2.03
PMS1-210ENST00000424307 C7orf61Q8IZ16 206 aa2.36□□□□□ -2.03
PMS1-210ENST00000424307 SLC6A18Q96N87 628 aa2.36□□□□□ -2.03
PMS1-210ENST00000424307 SUPT16HQ9Y5B9 1047 aaKnown RBP2.36□□□□□ -2.03
PMS1-210ENST00000424307 PATL2C9JE40 543 aaKnown RBP2.35□□□□□ -2.03
PMS1-210ENST00000424307 CHGBP05060 677 aa2.35□□□□□ -2.03
PMS1-210ENST00000424307 GSTM1P09488 218 aa2.35□□□□□ -2.03
PMS1-210ENST00000424307 IL12RB1P42701 662 aa2.35□□□□□ -2.03
PMS1-210ENST00000424307 APOBRQ0VD83 1088 aa2.35□□□□□ -2.03
PMS1-210ENST00000424307 CCDC142Q17RM4 750 aa2.35□□□□□ -2.03
PMS1-210ENST00000424307 CWF19L2Q2TBE0 894 aaKnown RBP2.35□□□□□ -2.03
PMS1-210ENST00000424307 EPHA10Q5JZY3 1008 aa2.35□□□□□ -2.03
PMS1-210ENST00000424307 SPDYAQ5MJ70 313 aa2.35□□□□□ -2.03
PMS1-210ENST00000424307 DCAF15Q66K64 600 aa2.35□□□□□ -2.03
PMS1-210ENST00000424307 CRTC3Q6UUV7 619 aa2.35□□□□□ -2.03
PMS1-210ENST00000424307 NLRC3Q7RTR2 1065 aa2.35□□□□□ -2.03
PMS1-210ENST00000424307 LZTR1Q8N653 840 aa2.35□□□□□ -2.03
PMS1-210ENST00000424307 TMEM87AQ8NBN3 555 aa2.35□□□□□ -2.03
PMS1-210ENST00000424307 USP33Q8TEY7 942 aa2.35□□□□□ -2.03
PMS1-210ENST00000424307 YTHDC1Q96MU7 727 aaKnown RBP2.35□□□□□ -2.03
PMS1-210ENST00000424307 DSCC1Q9BVC3 393 aa2.35□□□□□ -2.03
PMS1-210ENST00000424307 TMEM168Q9H0V1 697 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms