RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 GGA2Q9UJY4 613 aa16.9■□□□□ 0.3
C9orf3-204ENST00000424143 COL4A1P02462 1669 aa16.9■□□□□ 0.3
C9orf3-204ENST00000424143 ZNF185O15231 689 aa16.89■□□□□ 0.29
C9orf3-204ENST00000424143 FXR2P51116 673 aaKnown RBP eCLIP16.89■□□□□ 0.29
C9orf3-204ENST00000424143 ASIC1P78348 528 aa16.89■□□□□ 0.29
C9orf3-204ENST00000424143 TFAP4Q01664 338 aa16.89■□□□□ 0.29
C9orf3-204ENST00000424143 INF2Q27J81 1249 aa16.89■□□□□ 0.29
C9orf3-204ENST00000424143 SND1Q7KZF4 910 aaKnown RBP eCLIP16.89■□□□□ 0.29
C9orf3-204ENST00000424143 POTEDQ86YR6 584 aa16.89■□□□□ 0.29
C9orf3-204ENST00000424143 IFT20Q8IY31 132 aa16.89■□□□□ 0.29
C9orf3-204ENST00000424143 SEMA6BQ9H3T3 888 aa16.89■□□□□ 0.29
C9orf3-204ENST00000424143 C6orf50Q9HD87 102 aa16.89■□□□□ 0.29
C9orf3-204ENST00000424143 GDF3Q9NR23 364 aa16.89■□□□□ 0.29
C9orf3-204ENST00000424143 BTG4Q9NY30 223 aa16.89■□□□□ 0.29
C9orf3-204ENST00000424143 MYH14Q7Z406 1995 aaKnown RBP16.89■□□□□ 0.29
C9orf3-204ENST00000424143 PP2D1A8MPX8 630 aa16.88■□□□□ 0.29
C9orf3-204ENST00000424143 HIBADHP31937 336 aaKnown RBP16.88■□□□□ 0.29
C9orf3-204ENST00000424143 MAGEA1P43355 309 aa16.88■□□□□ 0.29
C9orf3-204ENST00000424143 C2orf54Q08AI8 447 aa16.88■□□□□ 0.29
C9orf3-204ENST00000424143 PDIA5Q14554 519 aa16.88■□□□□ 0.29
C9orf3-204ENST00000424143 TXNRD1Q16881 649 aa16.88■□□□□ 0.29
C9orf3-204ENST00000424143 HAUS3Q68CZ6 603 aa16.88■□□□□ 0.29
C9orf3-204ENST00000424143 B4GALNT4Q76KP1 1039 aa16.88■□□□□ 0.29
C9orf3-204ENST00000424143 SV2BQ7L1I2 683 aa16.88■□□□□ 0.29
C9orf3-204ENST00000424143 KIAA0895Q8NCT3 520 aa16.88■□□□□ 0.29
C9orf3-204ENST00000424143 BAP1Q92560 729 aa16.88■□□□□ 0.29
C9orf3-204ENST00000424143 PCMTD1Q96MG8 357 aaPredicted RBP16.88■□□□□ 0.29
C9orf3-204ENST00000424143 NOX5Q96PH1 765 aa16.88■□□□□ 0.29
C9orf3-204ENST00000424143 LRRC1Q9BTT6 524 aa16.88■□□□□ 0.29
C9orf3-204ENST00000424143 ZNF287Q9HBT7 754 aa16.88■□□□□ 0.29
C9orf3-204ENST00000424143 DUSP10Q9Y6W6 482 aa16.88■□□□□ 0.29
C9orf3-204ENST00000424143 ATP8B3O60423 1300 aa16.88■□□□□ 0.29
C9orf3-204ENST00000424143 BAZ2BQ9UIF8 2168 aaKnown RBP16.88■□□□□ 0.29
C9orf3-204ENST00000424143 SHTN1A0MZ66 631 aa16.88■□□□□ 0.29
C9orf3-204ENST00000424143 MACROD2A1Z1Q3 448 aa16.88■□□□□ 0.29
C9orf3-204ENST00000424143 HSF2BPO75031 334 aa16.88■□□□□ 0.29
C9orf3-204ENST00000424143 EIF4A3P38919 411 aaKnown RBP16.88■□□□□ 0.29
C9orf3-204ENST00000424143 CYP27A1Q02318 531 aa16.88■□□□□ 0.29
C9orf3-204ENST00000424143 EHHADHQ08426 723 aa16.88■□□□□ 0.29
C9orf3-204ENST00000424143 SLC35G1Q2M3R5 365 aa16.88■□□□□ 0.29
C9orf3-204ENST00000424143 CFAP221Q4G0U5 840 aa16.88■□□□□ 0.29
C9orf3-204ENST00000424143 PDXDC1Q6P996 788 aa16.88■□□□□ 0.29
C9orf3-204ENST00000424143 NEK8Q86SG6 692 aa16.88■□□□□ 0.29
C9orf3-204ENST00000424143 GPKOWQ92917 476 aaPredicted RBP eCLIP16.88■□□□□ 0.29
C9orf3-204ENST00000424143 MMTAG2Q9BU76 263 aaKnown RBP16.88■□□□□ 0.29
C9orf3-204ENST00000424143 DMGDHQ9UI17 866 aaKnown RBP16.88■□□□□ 0.29
C9orf3-204ENST00000424143 ATAD5Q96QE3 1844 aa16.87■□□□□ 0.29
C9orf3-204ENST00000424143 COL5A3P25940 1745 aaPredicted RBP16.87■□□□□ 0.29
C9orf3-204ENST00000424143 LOC102724428A0A0B4J2F2 783 aa16.87■□□□□ 0.29
C9orf3-204ENST00000424143 BTNL10A8MVZ5 291 aa16.87■□□□□ 0.29
C9orf3-204ENST00000424143 CYTH3O43739 400 aa16.87■□□□□ 0.29
C9orf3-204ENST00000424143 NOVP48745 357 aa16.87■□□□□ 0.29
C9orf3-204ENST00000424143 KLK7P49862 253 aa16.87■□□□□ 0.29
C9orf3-204ENST00000424143 SIK1P57059 783 aa16.87■□□□□ 0.29
C9orf3-204ENST00000424143 GSTO1P78417 241 aa16.87■□□□□ 0.29
C9orf3-204ENST00000424143 SWT1Q5T5J6 900 aaKnown RBP16.87■□□□□ 0.29
C9orf3-204ENST00000424143 PACS2Q86VP3 889 aa16.87■□□□□ 0.29
C9orf3-204ENST00000424143 C2CD5Q86YS7 1000 aa16.87■□□□□ 0.29
C9orf3-204ENST00000424143 IQCKQ8N0W5 287 aa16.87■□□□□ 0.29
C9orf3-204ENST00000424143 STAG2Q8N3U4 1231 aa16.87■□□□□ 0.29
C9orf3-204ENST00000424143 CAPN6Q9Y6Q1 641 aa16.87■□□□□ 0.29
C9orf3-204ENST00000424143 GRIN2DO15399 1336 aa16.87■□□□□ 0.29
C9orf3-204ENST00000424143 TNRC6CQ9HCJ0 1690 aaKnown RBP16.87■□□□□ 0.29
C9orf3-204ENST00000424143 AKR1B10O60218 316 aa16.86■□□□□ 0.29
C9orf3-204ENST00000424143 CYP2D6P10635 497 aa16.86■□□□□ 0.29
C9orf3-204ENST00000424143 ATP6V1AP38606 617 aa16.86■□□□□ 0.29
C9orf3-204ENST00000424143 PAK2Q13177 524 aa16.86■□□□□ 0.29
C9orf3-204ENST00000424143 CCDC181Q5TID7 509 aa16.86■□□□□ 0.29
C9orf3-204ENST00000424143 MMS22LQ6ZRQ5 1243 aa16.86■□□□□ 0.29
C9orf3-204ENST00000424143 RASGRP4Q8TDF6 673 aa16.86■□□□□ 0.29
C9orf3-204ENST00000424143 MTMR9Q96QG7 549 aa16.86■□□□□ 0.29
C9orf3-204ENST00000424143 TLR10Q9BXR5 811 aa16.86■□□□□ 0.29
C9orf3-204ENST00000424143 TFR2Q9UP52 801 aa16.86■□□□□ 0.29
C9orf3-204ENST00000424143 THRAP3Q9Y2W1 955 aaKnown RBP16.86■□□□□ 0.29
C9orf3-204ENST00000424143 IRS2Q9Y4H2 1338 aa16.86■□□□□ 0.29
C9orf3-204ENST00000424143 GNA14O95837 355 aa16.85■□□□□ 0.29
C9orf3-204ENST00000424143 MARSP56192 900 aaKnown RBP16.85■□□□□ 0.29
C9orf3-204ENST00000424143 C10orf76Q5T2E6 689 aa16.85■□□□□ 0.29
C9orf3-204ENST00000424143 KDM7AQ6ZMT4 941 aa16.85■□□□□ 0.29
C9orf3-204ENST00000424143 LRRC55Q6ZSA7 311 aa16.85■□□□□ 0.29
C9orf3-204ENST00000424143 YTHDF3Q7Z739 585 aaKnown RBP16.85■□□□□ 0.29
C9orf3-204ENST00000424143 WHAMMQ8TF30 809 aa16.85■□□□□ 0.29
C9orf3-204ENST00000424143 RIN2Q8WYP3 895 aaPredicted RBP16.85■□□□□ 0.29
C9orf3-204ENST00000424143 CEP63Q96MT8 703 aa16.85■□□□□ 0.29
C9orf3-204ENST00000424143 TSG101Q99816 390 aa16.85■□□□□ 0.29
C9orf3-204ENST00000424143 RAB34Q9BZG1 259 aa16.85■□□□□ 0.29
C9orf3-204ENST00000424143 DEF6Q9H4E7 631 aa16.85■□□□□ 0.29
C9orf3-204ENST00000424143 MCM9Q9NXL9 1143 aa16.85■□□□□ 0.29
C9orf3-204ENST00000424143 CEP72Q9P209 647 aa16.85■□□□□ 0.29
C9orf3-204ENST00000424143 MYH10P35580 1976 aa16.85■□□□□ 0.29
C9orf3-204ENST00000424143 ZMYND10O75800 440 aa16.85■□□□□ 0.29
C9orf3-204ENST00000424143 MOCS3O95396 460 aa16.85■□□□□ 0.29
C9orf3-204ENST00000424143 SERPING1P05155 500 aa16.85■□□□□ 0.29
C9orf3-204ENST00000424143 GUCY2CP25092 1073 aa16.85■□□□□ 0.29
C9orf3-204ENST00000424143 RPS8P62241 208 aaKnown RBP16.85■□□□□ 0.29
C9orf3-204ENST00000424143 ERFEQ4G0M1 354 aa16.85■□□□□ 0.29
C9orf3-204ENST00000424143 KLHDC7AQ5VTJ3 777 aa16.85■□□□□ 0.29
C9orf3-204ENST00000424143 HGSNATQ68CP4 663 aa16.85■□□□□ 0.29
C9orf3-204ENST00000424143 C8orf74Q6P047 294 aa16.85■□□□□ 0.29
C9orf3-204ENST00000424143 KRT26Q7Z3Y9 468 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms