RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 USP17L17D6RBQ6 530 aa13.12□□□□□ -0.31
ERCC1-204ENST00000423698 USP17L19D6RCP7 530 aa13.12□□□□□ -0.31
ERCC1-204ENST00000423698 USP17L20D6RJB6 530 aa13.12□□□□□ -0.31
ERCC1-204ENST00000423698 PSMA7O14818 248 aa13.12□□□□□ -0.31
ERCC1-204ENST00000423698 EPHB6O15197 1021 aa13.12□□□□□ -0.31
ERCC1-204ENST00000423698 KIF1CO43896 1103 aaKnown RBP13.12□□□□□ -0.31
ERCC1-204ENST00000423698 SERPINB2P05120 415 aa13.12□□□□□ -0.31
ERCC1-204ENST00000423698 CCT5P48643 541 aa13.12□□□□□ -0.31
ERCC1-204ENST00000423698 NAP1L1P55209 391 aaKnown RBP13.12□□□□□ -0.31
ERCC1-204ENST00000423698 USP17L24Q0WX57 530 aa13.12□□□□□ -0.31
ERCC1-204ENST00000423698 USP17L6PQ6QN14 398 aa13.12□□□□□ -0.31
ERCC1-204ENST00000423698 KCNK18Q7Z418 384 aa13.12□□□□□ -0.31
ERCC1-204ENST00000423698 CNOT6LQ96LI5 555 aaKnown RBP13.12□□□□□ -0.31
ERCC1-204ENST00000423698 DBNDD1Q9H9R9 158 aa13.12□□□□□ -0.31
ERCC1-204ENST00000423698 JADE2Q9NQC1 790 aa13.12□□□□□ -0.31
ERCC1-204ENST00000423698 DDX4Q9NQI0 724 aaKnown RBP13.12□□□□□ -0.31
ERCC1-204ENST00000423698 DONSONQ9NYP3 566 aa13.12□□□□□ -0.31
ERCC1-204ENST00000423698 REXO2Q9Y3B8 237 aaKnown RBP13.12□□□□□ -0.31
ERCC1-204ENST00000423698 EPN1Q9Y6I3 576 aaPredicted RBP13.12□□□□□ -0.31
ERCC1-204ENST00000423698 ATP1A1P05023 1023 aaKnown RBP13.11□□□□□ -0.31
ERCC1-204ENST00000423698 CORO7P57737 925 aa13.11□□□□□ -0.31
ERCC1-204ENST00000423698 CASP8Q14790 479 aa13.11□□□□□ -0.31
ERCC1-204ENST00000423698 PPP2R5BQ15173 497 aa13.11□□□□□ -0.31
ERCC1-204ENST00000423698 NONOQ15233 471 aaKnown RBP eCLIP13.11□□□□□ -0.31
ERCC1-204ENST00000423698 HDXQ7Z353 690 aa13.11□□□□□ -0.31
ERCC1-204ENST00000423698 KIAA0825Q8IV33 1275 aa13.11□□□□□ -0.31
ERCC1-204ENST00000423698 CAGE1Q8TC20 777 aa13.11□□□□□ -0.31
ERCC1-204ENST00000423698 PANX2Q96RD6 677 aa13.11□□□□□ -0.31
ERCC1-204ENST00000423698 BMP15O95972 392 aa13.11□□□□□ -0.31
ERCC1-204ENST00000423698 OR52Z1P0C646 297 aa13.11□□□□□ -0.31
ERCC1-204ENST00000423698 PDE6BP35913 854 aa13.11□□□□□ -0.31
ERCC1-204ENST00000423698 LONP1P36776 959 aaKnown RBP13.11□□□□□ -0.31
ERCC1-204ENST00000423698 PBX1P40424 430 aa13.11□□□□□ -0.31
ERCC1-204ENST00000423698 SLC10A5Q5PT55 438 aa13.11□□□□□ -0.31
ERCC1-204ENST00000423698 DGKHQ86XP1 1220 aa13.11□□□□□ -0.31
ERCC1-204ENST00000423698 ADSSL1Q8N142 457 aa13.11□□□□□ -0.31
ERCC1-204ENST00000423698 MB21D1Q8N884 522 aa13.11□□□□□ -0.31
ERCC1-204ENST00000423698 BCAS3Q9H6U6 928 aa13.11□□□□□ -0.31
ERCC1-204ENST00000423698 MKRN1Q9UHC7 482 aaKnown RBP13.11□□□□□ -0.31
ERCC1-204ENST00000423698 SAMM50Q9Y512 469 aa13.11□□□□□ -0.31
ERCC1-204ENST00000423698 CCDC151A5D8V7 595 aa13.11□□□□□ -0.31
ERCC1-204ENST00000423698 MAP2K7O14733 419 aa13.11□□□□□ -0.31
ERCC1-204ENST00000423698 ATP8B1O43520 1251 aa13.11□□□□□ -0.31
ERCC1-204ENST00000423698 NDUFA10O95299 355 aa13.11□□□□□ -0.31
ERCC1-204ENST00000423698 FGRP09769 529 aa13.11□□□□□ -0.31
ERCC1-204ENST00000423698 STAT3P40763 770 aa13.11□□□□□ -0.31
ERCC1-204ENST00000423698 NFIAQ12857 509 aa13.11□□□□□ -0.31
ERCC1-204ENST00000423698 USH1GQ495M9 461 aa13.11□□□□□ -0.31
ERCC1-204ENST00000423698 REXO1Q8N1G1 1221 aaKnown RBP13.11□□□□□ -0.31
ERCC1-204ENST00000423698 KCND1Q9NSA2 647 aa13.11□□□□□ -0.31
ERCC1-204ENST00000423698 LRWD1Q9UFC0 647 aa13.11□□□□□ -0.31
ERCC1-204ENST00000423698 TTF2Q9UNY4 1162 aaKnown RBP13.11□□□□□ -0.31
ERCC1-204ENST00000423698 TTC36A6NLP5 189 aa13.1□□□□□ -0.31
ERCC1-204ENST00000423698 MEIS1O00470 390 aa13.1□□□□□ -0.31
ERCC1-204ENST00000423698 KLRC4O43908 158 aa13.1□□□□□ -0.31
ERCC1-204ENST00000423698 NBPF9Q3BBW0 867 aa13.1□□□□□ -0.31
ERCC1-204ENST00000423698 CYP26C1Q6V0L0 522 aa13.1□□□□□ -0.31
ERCC1-204ENST00000423698 FGFBP2Q9BYJ0 223 aa13.1□□□□□ -0.31
ERCC1-204ENST00000423698 USP17L10C9JJH3 530 aa13.1□□□□□ -0.31
ERCC1-204ENST00000423698 RNF40O75150 1001 aa13.1□□□□□ -0.31
ERCC1-204ENST00000423698 MAP2K2P36507 400 aa13.1□□□□□ -0.31
ERCC1-204ENST00000423698 STIM1Q13586 685 aa13.1□□□□□ -0.31
ERCC1-204ENST00000423698 CALCRLQ16602 461 aa13.1□□□□□ -0.31
ERCC1-204ENST00000423698 NEK8Q86SG6 692 aa13.1□□□□□ -0.31
ERCC1-204ENST00000423698 C2CD5Q86YS7 1000 aa13.1□□□□□ -0.31
ERCC1-204ENST00000423698 SPICE1Q8N0Z3 855 aa13.1□□□□□ -0.31
ERCC1-204ENST00000423698 DUSP9Q99956 384 aaKnown RBP13.1□□□□□ -0.31
ERCC1-204ENST00000423698 COL22A1Q8NFW1 1626 aaPredicted RBP13.09□□□□□ -0.31
ERCC1-204ENST00000423698 ARHGAP25P42331 645 aa13.09□□□□□ -0.31
ERCC1-204ENST00000423698 SBK1Q52WX2 424 aa13.09□□□□□ -0.31
ERCC1-204ENST00000423698 TADA2BQ86TJ2 420 aa13.09□□□□□ -0.31
ERCC1-204ENST00000423698 SEPT12Q8IYM1 358 aa13.09□□□□□ -0.31
ERCC1-204ENST00000423698 SNX29Q8TEQ0 813 aa13.09□□□□□ -0.31
ERCC1-204ENST00000423698 NAPGQ99747 312 aaPredicted RBP13.09□□□□□ -0.31
ERCC1-204ENST00000423698 JPH2Q9BR39 696 aaPredicted RBP13.09□□□□□ -0.31
ERCC1-204ENST00000423698 TRIM9Q9C026 710 aa13.09□□□□□ -0.31
ERCC1-204ENST00000423698 MLXIPQ9HAP2 919 aa13.09□□□□□ -0.31
ERCC1-204ENST00000423698 C6orf50Q9HD87 102 aa13.09□□□□□ -0.31
ERCC1-204ENST00000423698 NID2Q14112 1375 aa13.09□□□□□ -0.31
ERCC1-204ENST00000423698 PALM3A6NDB9 673 aaPredicted RBP13.09□□□□□ -0.31
ERCC1-204ENST00000423698 MYMKA6NI61 221 aa13.09□□□□□ -0.31
ERCC1-204ENST00000423698 HSPA1LP34931 641 aa13.09□□□□□ -0.31
ERCC1-204ENST00000423698 VPS72Q15906 364 aa13.09□□□□□ -0.31
ERCC1-204ENST00000423698 ECM1Q16610 540 aa13.09□□□□□ -0.31
ERCC1-204ENST00000423698 MCTP2Q6DN12 878 aa13.09□□□□□ -0.31
ERCC1-204ENST00000423698 WDR59Q6PJI9 974 aa13.09□□□□□ -0.31
ERCC1-204ENST00000423698 PROCA1Q8NCQ7 364 aaPredicted RBP13.09□□□□□ -0.31
ERCC1-204ENST00000423698 CCDC148Q8NFR7 591 aa13.09□□□□□ -0.31
ERCC1-204ENST00000423698 USP40Q9NVE5 1235 aa13.09□□□□□ -0.31
ERCC1-204ENST00000423698 RMND1Q9NWS8 449 aa13.09□□□□□ -0.31
ERCC1-204ENST00000423698 SUFUQ9UMX1 484 aa13.09□□□□□ -0.31
ERCC1-204ENST00000423698 BCS1LQ9Y276 419 aa13.09□□□□□ -0.31
ERCC1-204ENST00000423698 SEMA3EO15041 775 aa13.08□□□□□ -0.31
ERCC1-204ENST00000423698 NCK2O43639 380 aa13.08□□□□□ -0.31
ERCC1-204ENST00000423698 BUB1O43683 1085 aa13.08□□□□□ -0.31
ERCC1-204ENST00000423698 ERLIN2O94905 339 aa13.08□□□□□ -0.31
ERCC1-204ENST00000423698 RCAN1P53805 252 aa13.08□□□□□ -0.31
ERCC1-204ENST00000423698 SRGAP1Q7Z6B7 1085 aa13.08□□□□□ -0.31
ERCC1-204ENST00000423698 KIAA0895Q8NCT3 520 aa13.08□□□□□ -0.31
ERCC1-204ENST00000423698 OR8K1Q8NGG5 319 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 192.1 ms