RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 CCSAPQ6IQ19 270 aaPredicted RBP30.52■■■□□ 2.48
CDK9-202ENST00000421939 IWS1Q96ST2 819 aa30.52■■■□□ 2.48
CDK9-202ENST00000421939 WDR11Q9BZH6 1224 aa30.52■■■□□ 2.48
CDK9-202ENST00000421939 GOLGA8AA7E2F4 631 aa30.51■■■□□ 2.47
CDK9-202ENST00000421939 GOLGA8BA8MQT2 603 aa30.51■■■□□ 2.47
CDK9-202ENST00000421939 EIF2AK2P19525 551 aaKnown RBP30.51■■■□□ 2.47
CDK9-202ENST00000421939 HOXA13P31271 388 aaPredicted RBP30.51■■■□□ 2.47
CDK9-202ENST00000421939 RTP1P59025 263 aa30.51■■■□□ 2.47
CDK9-202ENST00000421939 SNX17Q15036 470 aa30.51■■■□□ 2.47
CDK9-202ENST00000421939 KCNA10Q16322 511 aa30.51■■■□□ 2.47
CDK9-202ENST00000421939 DUSP28Q4G0W2 176 aa30.51■■■□□ 2.47
CDK9-202ENST00000421939 SLC39A5Q6ZMH5 540 aa30.51■■■□□ 2.47
CDK9-202ENST00000421939 CCDC82Q8N4S0 544 aa30.51■■■□□ 2.47
CDK9-202ENST00000421939 PCSK9Q8NBP7 692 aaKnown RBP30.51■■■□□ 2.47
CDK9-202ENST00000421939 BRF1Q92994 677 aa30.51■■■□□ 2.47
CDK9-202ENST00000421939 PXMP2Q9NR77 195 aa30.51■■■□□ 2.47
CDK9-202ENST00000421939 ZMYND8Q9ULU4 1186 aaPredicted RBP30.51■■■□□ 2.47
CDK9-202ENST00000421939 NAP1L2Q9ULW6 460 aaPredicted RBP30.51■■■□□ 2.47
CDK9-202ENST00000421939 CNTNAP5Q8WYK1 1306 aa30.5■■■□□ 2.47
CDK9-202ENST00000421939 CTAGE5O15320 804 aa30.5■■■□□ 2.47
CDK9-202ENST00000421939 PTGS1P23219 599 aa30.5■■■□□ 2.47
CDK9-202ENST00000421939 GNASQ5JWF2 1037 aa30.5■■■□□ 2.47
CDK9-202ENST00000421939 TMEM63BQ5T3F8 832 aa30.5■■■□□ 2.47
CDK9-202ENST00000421939 FBXL16Q8N461 479 aa30.5■■■□□ 2.47
CDK9-202ENST00000421939 SCFD2Q8WU76 684 aa30.5■■■□□ 2.47
CDK9-202ENST00000421939 AP5M1Q9H0R1 490 aa30.5■■■□□ 2.47
CDK9-202ENST00000421939 Q9Y3F1 56 aa30.5■■■□□ 2.47
CDK9-202ENST00000421939 APOBRQ0VD83 1088 aa30.49■■■□□ 2.47
CDK9-202ENST00000421939 AGXT2Q9BYV1 514 aa30.49■■■□□ 2.47
CDK9-202ENST00000421939 DYNC1LI2O43237 492 aaPredicted RBP30.48■■■□□ 2.47
CDK9-202ENST00000421939 PPP2R5BQ15173 497 aa30.48■■■□□ 2.47
CDK9-202ENST00000421939 STXBP2Q15833 593 aa30.48■■■□□ 2.47
CDK9-202ENST00000421939 FSCN1Q16658 493 aaKnown RBP30.48■■■□□ 2.47
CDK9-202ENST00000421939 ZSWIM6Q9HCJ5 1215 aa30.48■■■□□ 2.47
CDK9-202ENST00000421939 ATP11BQ9Y2G3 1177 aa30.48■■■□□ 2.47
CDK9-202ENST00000421939 hCG_1642624A0A1W2PR95 340 aa30.47■■■□□ 2.47
CDK9-202ENST00000421939 ASGR1P07306 291 aa30.47■■■□□ 2.47
CDK9-202ENST00000421939 NR3C2P08235 984 aa30.47■■■□□ 2.47
CDK9-202ENST00000421939 BEX3Q00994 111 aa30.47■■■□□ 2.47
CDK9-202ENST00000421939 TRIM60Q495X7 471 aa30.47■■■□□ 2.47
CDK9-202ENST00000421939 C1orf53Q5VUE5 145 aa30.47■■■□□ 2.47
CDK9-202ENST00000421939 RUFY3Q7L099 469 aa30.47■■■□□ 2.47
CDK9-202ENST00000421939 PDCD2LQ9BRP1 358 aa30.47■■■□□ 2.47
CDK9-202ENST00000421939 TM6SF1Q9BZW5 370 aa30.47■■■□□ 2.47
CDK9-202ENST00000421939 STARD7Q9NQZ5 370 aa30.47■■■□□ 2.47
CDK9-202ENST00000421939 NID2Q14112 1375 aa30.46■■■□□ 2.47
CDK9-202ENST00000421939 SYN1P17600 705 aa30.46■■■□□ 2.47
CDK9-202ENST00000421939 METAP2P50579 478 aaKnown RBP eCLIP30.46■■■□□ 2.47
CDK9-202ENST00000421939 FUT2Q10981 343 aa30.46■■■□□ 2.47
CDK9-202ENST00000421939 FCHSD1Q86WN1 690 aa30.46■■■□□ 2.47
CDK9-202ENST00000421939 GLT1D1Q96MS3 346 aa30.46■■■□□ 2.47
CDK9-202ENST00000421939 FAM217BQ9NTX9 383 aaPredicted RBP30.46■■■□□ 2.47
CDK9-202ENST00000421939 CYP46A1Q9Y6A2 500 aa30.46■■■□□ 2.47
CDK9-202ENST00000421939 RANBP2P49792 3224 aaKnown RBP30.45■■■□□ 2.47
CDK9-202ENST00000421939 NKRFO15226 690 aaKnown RBP eCLIP30.45■■■□□ 2.47
CDK9-202ENST00000421939 CDC27P30260 824 aa30.45■■■□□ 2.47
CDK9-202ENST00000421939 TTLL4Q14679 1199 aa30.45■■■□□ 2.47
CDK9-202ENST00000421939 CHRDL2Q6WN34 429 aa30.45■■■□□ 2.47
CDK9-202ENST00000421939 EIF3JO75822 258 aaKnown RBP30.44■■■□□ 2.46
CDK9-202ENST00000421939 SEPT14Q6ZU15 432 aa30.44■■■□□ 2.46
CDK9-202ENST00000421939 HEATR3Q7Z4Q2 680 aa30.44■■■□□ 2.46
CDK9-202ENST00000421939 CUL5Q93034 780 aa30.44■■■□□ 2.46
CDK9-202ENST00000421939 ELP1O95163 1332 aa30.44■■■□□ 2.46
CDK9-202ENST00000421939 CCDC196A0A1B0GTZ2 297 aa30.43■■■□□ 2.46
CDK9-202ENST00000421939 ZEB2O60315 1214 aa30.43■■■□□ 2.46
CDK9-202ENST00000421939 EIF5BO60841 1220 aaKnown RBP30.43■■■□□ 2.46
CDK9-202ENST00000421939 ARIH2O95376 493 aa30.43■■■□□ 2.46
CDK9-202ENST00000421939 TXNP10599 105 aaKnown RBP30.43■■■□□ 2.46
CDK9-202ENST00000421939 PGM5Q15124 567 aa30.43■■■□□ 2.46
CDK9-202ENST00000421939 OR6J1Q8NGC5 347 aa30.43■■■□□ 2.46
CDK9-202ENST00000421939 IL31RAQ8NI17 732 aa30.43■■■□□ 2.46
CDK9-202ENST00000421939 GPKOWQ92917 476 aaPredicted RBP eCLIP30.43■■■□□ 2.462e-6■□□□□ 9.6
CDK9-202ENST00000421939 UPF3BQ9BZI7 483 aaKnown RBP30.43■■■□□ 2.46
CDK9-202ENST00000421939 COLQQ9Y215 455 aaPredicted RBP30.43■■■□□ 2.46
CDK9-202ENST00000421939 KIAA1217Q5T5P2 1943 aa30.43■■■□□ 2.46
CDK9-202ENST00000421939 FRMPD4Q14CM0 1322 aa30.43■■■□□ 2.46
CDK9-202ENST00000421939 PIK3CDO00329 1044 aa30.42■■■□□ 2.46
CDK9-202ENST00000421939 CCDC62Q6P9F0 684 aa30.42■■■□□ 2.46
CDK9-202ENST00000421939 MYCLP12524 364 aaPredicted RBP30.41■■■□□ 2.46
CDK9-202ENST00000421939 ADD1P35611 737 aaKnown RBP30.41■■■□□ 2.46
CDK9-202ENST00000421939 TLE2Q04725 743 aa30.41■■■□□ 2.46
CDK9-202ENST00000421939 USP17L6PQ6QN14 398 aa30.41■■■□□ 2.46
CDK9-202ENST00000421939 CXCL17Q6UXB2 119 aa30.41■■■□□ 2.46
CDK9-202ENST00000421939 SMARCC2Q8TAQ2 1214 aa30.41■■■□□ 2.46
CDK9-202ENST00000421939 PSTPIP2Q9H939 334 aa30.41■■■□□ 2.46
CDK9-202ENST00000421939 MEIS2O14770 477 aa30.4■■■□□ 2.46
CDK9-202ENST00000421939 CABYRO75952 493 aa30.4■■■□□ 2.46
CDK9-202ENST00000421939 CCND2P30279 289 aa30.4■■■□□ 2.46
CDK9-202ENST00000421939 CPT1AP50416 773 aa30.4■■■□□ 2.46
CDK9-202ENST00000421939 EVCP57679 992 aa30.4■■■□□ 2.46
CDK9-202ENST00000421939 TOB2Q14106 344 aaPredicted RBP30.4■■■□□ 2.46
CDK9-202ENST00000421939 WWC2Q6AWC2 1192 aa30.4■■■□□ 2.46
CDK9-202ENST00000421939 VSIG10LQ86VR7 867 aa30.4■■■□□ 2.46
CDK9-202ENST00000421939 COPS5Q92905 334 aa30.4■■■□□ 2.46
CDK9-202ENST00000421939 VTI1AQ96AJ9 217 aa30.4■■■□□ 2.46
CDK9-202ENST00000421939 V9GY48 417 aaPredicted RBP30.4■■■□□ 2.46
CDK9-202ENST00000421939 A0A0U1RQG5 324 aaPredicted RBP30.39■■■□□ 2.46
CDK9-202ENST00000421939 PQBP1O60828 265 aaKnown RBP30.39■■■□□ 2.46
CDK9-202ENST00000421939 ANAPC15P60006 121 aa30.39■■■□□ 2.46
CDK9-202ENST00000421939 PRO3102Q9H379 93 aa30.39■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms