RNA–Protein interactions for RNA: ENST00000421710.5

SNAPC3-203, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 5

Gene SNAPC3, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-203ENST00000421710 COL20A1Q9P218 1284 aa28.99■■■□□ 2.23
SNAPC3-203ENST00000421710 SNX14Q9Y5W7 946 aa28.99■■■□□ 2.23
SNAPC3-203ENST00000421710 ELP1O95163 1332 aa28.98■■■□□ 2.23
SNAPC3-203ENST00000421710 GCOM1H8Y6P7 765 aaPredicted RBP28.98■■■□□ 2.23
SNAPC3-203ENST00000421710 PLEKHA8P1O95397 391 aa28.98■■■□□ 2.23
SNAPC3-203ENST00000421710 ASGR1P07306 291 aa28.98■■■□□ 2.23
SNAPC3-203ENST00000421710 POLR2MP0CAP2 368 aa28.98■■■□□ 2.23
SNAPC3-203ENST00000421710 SYN1P17600 705 aa28.98■■■□□ 2.23
SNAPC3-203ENST00000421710 PPP2R5BQ15173 497 aa28.98■■■□□ 2.23
SNAPC3-203ENST00000421710 STXBP2Q15833 593 aa28.98■■■□□ 2.23
SNAPC3-203ENST00000421710 FSCN1Q16658 493 aaKnown RBP28.98■■■□□ 2.23
SNAPC3-203ENST00000421710 HABP4Q5JVS0 413 aaKnown RBP28.98■■■□□ 2.23
SNAPC3-203ENST00000421710 BLOC1S2Q6QNY1 142 aa28.98■■■□□ 2.23
SNAPC3-203ENST00000421710 TCEANC2Q96MN5 208 aa28.98■■■□□ 2.23
SNAPC3-203ENST00000421710 DYNC1LI2O43237 492 aaPredicted RBP28.97■■■□□ 2.23
SNAPC3-203ENST00000421710 ZBTB43O43298 467 aa28.97■■■□□ 2.23
SNAPC3-203ENST00000421710 RCAN1P53805 252 aa28.97■■■□□ 2.23
SNAPC3-203ENST00000421710 TRIM60Q495X7 471 aa28.97■■■□□ 2.23
SNAPC3-203ENST00000421710 TMTC3Q6ZXV5 915 aa28.97■■■□□ 2.23
SNAPC3-203ENST00000421710 SRBD1Q8N5C6 995 aaKnown RBP28.97■■■□□ 2.23
SNAPC3-203ENST00000421710 PIBF1Q8WXW3 757 aa28.97■■■□□ 2.23
SNAPC3-203ENST00000421710 PXMP2Q9NR77 195 aa28.97■■■□□ 2.23
SNAPC3-203ENST00000421710 CABYRO75952 493 aa28.96■■■□□ 2.23
SNAPC3-203ENST00000421710 TTLL4Q14679 1199 aa28.96■■■□□ 2.23
SNAPC3-203ENST00000421710 CTAGE5O15320 804 aa28.95■■■□□ 2.22
SNAPC3-203ENST00000421710 EIF2AK2P19525 551 aaKnown RBP28.95■■■□□ 2.22
SNAPC3-203ENST00000421710 BRDTQ58F21 947 aaPredicted RBP28.95■■■□□ 2.22
SNAPC3-203ENST00000421710 RAB11FIP4Q86YS3 637 aa28.95■■■□□ 2.22
SNAPC3-203ENST00000421710 PRO3102Q9H379 93 aa28.95■■■□□ 2.22
SNAPC3-203ENST00000421710 MROH7Q68CQ1 1323 aa28.94■■■□□ 2.22
SNAPC3-203ENST00000421710 KLF18A0A0U1RQI7 1052 aa28.94■■■□□ 2.22
SNAPC3-203ENST00000421710 A0A1W2PPC1 479 aa28.94■■■□□ 2.22
SNAPC3-203ENST00000421710 CPT1AP50416 773 aa28.94■■■□□ 2.22
SNAPC3-203ENST00000421710 BEX3Q00994 111 aa28.94■■■□□ 2.22
SNAPC3-203ENST00000421710 RTN1Q16799 776 aa28.94■■■□□ 2.22
SNAPC3-203ENST00000421710 VTI1AQ96AJ9 217 aa28.94■■■□□ 2.22
SNAPC3-203ENST00000421710 GDF15Q99988 308 aa28.94■■■□□ 2.22
SNAPC3-203ENST00000421710 RBM27Q9P2N5 1060 aaKnown RBP28.94■■■□□ 2.22
SNAPC3-203ENST00000421710 A0A0U1RQG5 324 aaPredicted RBP28.93■■■□□ 2.22
SNAPC3-203ENST00000421710 EIF3JO75822 258 aaKnown RBP28.93■■■□□ 2.22
SNAPC3-203ENST00000421710 NR3C2P08235 984 aa28.93■■■□□ 2.22
SNAPC3-203ENST00000421710 TXNP10599 105 aaKnown RBP28.93■■■□□ 2.22
SNAPC3-203ENST00000421710 HOXA13P31271 388 aaPredicted RBP28.93■■■□□ 2.22
SNAPC3-203ENST00000421710 BMP8BP34820 402 aa28.93■■■□□ 2.22
SNAPC3-203ENST00000421710 IRX5P78411 483 aaPredicted RBP28.93■■■□□ 2.22
SNAPC3-203ENST00000421710 CMTR1Q8N1G2 835 aaKnown RBP28.93■■■□□ 2.22
SNAPC3-203ENST00000421710 CUL5Q93034 780 aa28.93■■■□□ 2.22
SNAPC3-203ENST00000421710 BRPF3Q9ULD4 1205 aa28.93■■■□□ 2.22
SNAPC3-203ENST00000421710 GOLGA8AA7E2F4 631 aa28.92■■■□□ 2.22
SNAPC3-203ENST00000421710 GOLGA8BA8MQT2 603 aa28.92■■■□□ 2.22
SNAPC3-203ENST00000421710 EIF5BO60841 1220 aaKnown RBP28.92■■■□□ 2.22
SNAPC3-203ENST00000421710 RPS6KB1P23443 525 aa28.92■■■□□ 2.22
SNAPC3-203ENST00000421710 MAGEA10P43363 369 aaPredicted RBP28.92■■■□□ 2.22
SNAPC3-203ENST00000421710 TLE2Q04725 743 aa28.92■■■□□ 2.22
SNAPC3-203ENST00000421710 Q6ZUG5 572 aa28.92■■■□□ 2.22
SNAPC3-203ENST00000421710 ANKRD33Q7Z3H0 272 aa28.92■■■□□ 2.22
SNAPC3-203ENST00000421710 FBXL16Q8N461 479 aa28.92■■■□□ 2.22
SNAPC3-203ENST00000421710 OR6J1Q8NGC5 347 aa28.92■■■□□ 2.22
SNAPC3-203ENST00000421710 TOX2Q96NM4 488 aa28.92■■■□□ 2.22
SNAPC3-203ENST00000421710 LBHD1Q9BQE6 289 aaPredicted RBP28.92■■■□□ 2.22
SNAPC3-203ENST00000421710 SEZ6LQ9BYH1 1024 aa28.92■■■□□ 2.22
SNAPC3-203ENST00000421710 PRDM5Q9NQX1 630 aaPredicted RBP28.92■■■□□ 2.22
SNAPC3-203ENST00000421710 KIAA1217Q5T5P2 1943 aa28.91■■■□□ 2.22
SNAPC3-203ENST00000421710 PQBP1O60828 265 aaKnown RBP28.91■■■□□ 2.22
SNAPC3-203ENST00000421710 CASTP20810 708 aaKnown RBP28.91■■■□□ 2.22
SNAPC3-203ENST00000421710 CCDC82Q8N4S0 544 aa28.91■■■□□ 2.22
SNAPC3-203ENST00000421710 PDCD2LQ9BRP1 358 aa28.91■■■□□ 2.22
SNAPC3-203ENST00000421710 USP26Q9BXU7 913 aa28.91■■■□□ 2.22
SNAPC3-203ENST00000421710 POLR3EQ9NVU0 708 aa28.91■■■□□ 2.22
SNAPC3-203ENST00000421710 CCDC196A0A1B0GTZ2 297 aa28.9■■■□□ 2.22
SNAPC3-203ENST00000421710 DCDC2CA8MYV0 355 aa28.9■■■□□ 2.22
SNAPC3-203ENST00000421710 CLTBP09497 229 aa28.9■■■□□ 2.22
SNAPC3-203ENST00000421710 CPA1P15085 419 aa28.9■■■□□ 2.22
SNAPC3-203ENST00000421710 TMEM63BQ5T3F8 832 aa28.9■■■□□ 2.22
SNAPC3-203ENST00000421710 SEPT14Q6ZU15 432 aa28.9■■■□□ 2.22
SNAPC3-203ENST00000421710 FCHSD1Q86WN1 690 aa28.9■■■□□ 2.22
SNAPC3-203ENST00000421710 PDLIM7Q9NR12 457 aa28.9■■■□□ 2.22
SNAPC3-203ENST00000421710 NAP1L2Q9ULW6 460 aaPredicted RBP28.9■■■□□ 2.22
SNAPC3-203ENST00000421710 PIK3CDO00329 1044 aa28.89■■■□□ 2.22
SNAPC3-203ENST00000421710 PGM5Q15124 567 aa28.89■■■□□ 2.22
SNAPC3-203ENST00000421710 CXCL17Q6UXB2 119 aa28.89■■■□□ 2.22
SNAPC3-203ENST00000421710 SMARCC2Q8TAQ2 1214 aa28.89■■■□□ 2.22
SNAPC3-203ENST00000421710 BRF1Q92994 677 aa28.89■■■□□ 2.22
SNAPC3-203ENST00000421710 ARVCFO00192 962 aa28.88■■■□□ 2.21
SNAPC3-203ENST00000421710 MYCLP12524 364 aaPredicted RBP28.88■■■□□ 2.21
SNAPC3-203ENST00000421710 CCND2P30279 289 aa28.88■■■□□ 2.21
SNAPC3-203ENST00000421710 METAP2P50579 478 aaKnown RBP eCLIP28.88■■■□□ 2.21
SNAPC3-203ENST00000421710 CCDC62Q6P9F0 684 aa28.88■■■□□ 2.21
SNAPC3-203ENST00000421710 KCNV1Q6PIU1 500 aa28.88■■■□□ 2.21
SNAPC3-203ENST00000421710 CNTNAP5Q8WYK1 1306 aa28.88■■■□□ 2.21
SNAPC3-203ENST00000421710 KPNA6O60684 536 aa28.87■■■□□ 2.21
SNAPC3-203ENST00000421710 PTGS1P23219 599 aa28.87■■■□□ 2.21
SNAPC3-203ENST00000421710 VSIG10LQ86VR7 867 aa28.87■■■□□ 2.21
SNAPC3-203ENST00000421710 AGXT2Q9BYV1 514 aa28.87■■■□□ 2.21
SNAPC3-203ENST00000421710 UBE2OQ9C0C9 1292 aaKnown RBP28.87■■■□□ 2.21
SNAPC3-203ENST00000421710 MRVI1Q9Y6F6 885 aa28.87■■■□□ 2.21
SNAPC3-203ENST00000421710 TRIOBPQ9H2D6 2365 aa28.87■■■□□ 2.21
SNAPC3-203ENST00000421710 RANBP2P49792 3224 aaKnown RBP28.86■■■□□ 2.21
SNAPC3-203ENST00000421710 LTBP2Q14767 1821 aa28.86■■■□□ 2.21
SNAPC3-203ENST00000421710 hCG_1984214I3L0E3 225 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 1462 ms