RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 PTPN21Q16825 1174 aa10.85□□□□□ -0.67
TRIM39-206ENST00000420746 TCTN1Q2MV58 587 aa10.85□□□□□ -0.67
TRIM39-206ENST00000420746 TKFCQ3LXA3 575 aa10.85□□□□□ -0.67
TRIM39-206ENST00000420746 TMEM63BQ5T3F8 832 aa10.85□□□□□ -0.67
TRIM39-206ENST00000420746 FAM117BQ6P1L5 589 aa10.85□□□□□ -0.67
TRIM39-206ENST00000420746 FRMD5Q7Z6J6 570 aa10.85□□□□□ -0.67
TRIM39-206ENST00000420746 DYNLL2Q96FJ2 89 aa10.85□□□□□ -0.67
TRIM39-206ENST00000420746 CTAGE1Q96RT6 745 aa10.85□□□□□ -0.67
TRIM39-206ENST00000420746 MEIS3Q99687 375 aa10.85□□□□□ -0.67
TRIM39-206ENST00000420746 PHF7Q9BWX1 381 aaPredicted RBP10.85□□□□□ -0.67
TRIM39-206ENST00000420746 MYO5AQ9Y4I1 1855 aaKnown RBP10.85□□□□□ -0.67
TRIM39-206ENST00000420746 RBM47A0AV96 593 aaKnown RBP10.84□□□□□ -0.67
TRIM39-206ENST00000420746 A6NJR5 290 aa10.84□□□□□ -0.67
TRIM39-206ENST00000420746 RAD21O60216 631 aa10.84□□□□□ -0.67
TRIM39-206ENST00000420746 NDUFB10O96000 172 aa10.84□□□□□ -0.67
TRIM39-206ENST00000420746 CKBP12277 381 aa10.84□□□□□ -0.67
TRIM39-206ENST00000420746 CDK8P49336 464 aa10.84□□□□□ -0.67
TRIM39-206ENST00000420746 COASYQ13057 564 aa10.84□□□□□ -0.67
TRIM39-206ENST00000420746 ADAM15Q13444 863 aa10.84□□□□□ -0.67
TRIM39-206ENST00000420746 ALDH1L2Q3SY69 923 aa10.84□□□□□ -0.67
TRIM39-206ENST00000420746 C16orf86Q6ZW13 317 aa10.84□□□□□ -0.67
TRIM39-206ENST00000420746 NUP88Q99567 741 aaPredicted RBP10.84□□□□□ -0.67
TRIM39-206ENST00000420746 C11orf84Q9BUA3 381 aaPredicted RBP10.84□□□□□ -0.67
TRIM39-206ENST00000420746 WDR11Q9BZH6 1224 aa10.84□□□□□ -0.67
TRIM39-206ENST00000420746 NYAP2Q9P242 653 aa10.84□□□□□ -0.67
TRIM39-206ENST00000420746 FEM1BQ9UK73 627 aa10.84□□□□□ -0.67
TRIM39-206ENST00000420746 SYNPO2Q9UMS6 1093 aa10.84□□□□□ -0.67
TRIM39-206ENST00000420746 SALL2Q9Y467 1007 aaPredicted RBP10.84□□□□□ -0.67
TRIM39-206ENST00000420746 EMSYQ7Z589 1322 aa10.84□□□□□ -0.67
TRIM39-206ENST00000420746 F5H6K3 240 aa10.83□□□□□ -0.68
TRIM39-206ENST00000420746 LGR5O75473 907 aa10.83□□□□□ -0.68
TRIM39-206ENST00000420746 CYP2D6P10635 497 aa10.83□□□□□ -0.68
TRIM39-206ENST00000420746 ATF7P17544 494 aaPredicted RBP10.83□□□□□ -0.68
TRIM39-206ENST00000420746 KLRC3Q07444 240 aa10.83□□□□□ -0.68
TRIM39-206ENST00000420746 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.83□□□□□ -0.68
TRIM39-206ENST00000420746 EEPD1Q7L9B9 569 aa10.83□□□□□ -0.68
TRIM39-206ENST00000420746 RPAP2Q8IXW5 612 aaPredicted RBP10.83□□□□□ -0.68
TRIM39-206ENST00000420746 MYOCDQ8IZQ8 938 aa10.83□□□□□ -0.68
TRIM39-206ENST00000420746 OR6J1Q8NGC5 347 aa10.83□□□□□ -0.68
TRIM39-206ENST00000420746 SDR42E1Q8WUS8 393 aa10.83□□□□□ -0.68
TRIM39-206ENST00000420746 DHX38Q92620 1227 aaKnown RBP10.83□□□□□ -0.68
TRIM39-206ENST00000420746 PPP2R3CQ969Q6 453 aa10.83□□□□□ -0.68
TRIM39-206ENST00000420746 KIFC2Q96AC6 838 aa10.83□□□□□ -0.68
TRIM39-206ENST00000420746 YME1L1Q96TA2 773 aa10.83□□□□□ -0.68
TRIM39-206ENST00000420746 SEMA4AQ9H3S1 761 aa10.83□□□□□ -0.68
TRIM39-206ENST00000420746 HOMER2Q9NSB8 354 aa10.83□□□□□ -0.68
TRIM39-206ENST00000420746 RNF146Q9NTX7 359 aa10.83□□□□□ -0.68
TRIM39-206ENST00000420746 DLL3Q9NYJ7 618 aa10.83□□□□□ -0.68
TRIM39-206ENST00000420746 RWDD3Q9Y3V2 267 aa10.83□□□□□ -0.68
TRIM39-206ENST00000420746 NDUFV1P49821 464 aa10.82□□□□□ -0.68
TRIM39-206ENST00000420746 RRP1P56182 461 aaKnown RBP10.82□□□□□ -0.68
TRIM39-206ENST00000420746 C12orf60Q5U649 245 aa10.82□□□□□ -0.68
TRIM39-206ENST00000420746 GDF6Q6KF10 455 aaPredicted RBP10.82□□□□□ -0.68
TRIM39-206ENST00000420746 TRAF7Q6Q0C0 670 aa10.82□□□□□ -0.68
TRIM39-206ENST00000420746 AMOTL1Q8IY63 956 aa10.82□□□□□ -0.68
TRIM39-206ENST00000420746 TOP1MTQ969P6 601 aa10.82□□□□□ -0.68
TRIM39-206ENST00000420746 ATP8A2Q9NTI2 1148 aa10.82□□□□□ -0.68
TRIM39-206ENST00000420746 CYP39A1Q9NYL5 469 aa10.82□□□□□ -0.68
TRIM39-206ENST00000420746 ATRXP46100 2492 aa10.82□□□□□ -0.68
TRIM39-206ENST00000420746 MYH8P13535 1937 aa10.82□□□□□ -0.68
TRIM39-206ENST00000420746 RALGAPA2Q2PPJ7 1873 aa10.81□□□□□ -0.68
TRIM39-206ENST00000420746 FRYLO94915 3013 aa10.81□□□□□ -0.68
TRIM39-206ENST00000420746 PDGFBP01127 241 aaPredicted RBP10.81□□□□□ -0.68
TRIM39-206ENST00000420746 MMP1P03956 469 aa10.81□□□□□ -0.68
TRIM39-206ENST00000420746 PTK7Q13308 1070 aa10.81□□□□□ -0.68
TRIM39-206ENST00000420746 PPP2R5BQ15173 497 aa10.81□□□□□ -0.68
TRIM39-206ENST00000420746 UBALD2Q8IYN6 164 aa10.81□□□□□ -0.68
TRIM39-206ENST00000420746 TMEM105Q8N8V8 129 aa10.81□□□□□ -0.68
TRIM39-206ENST00000420746 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.81□□□□□ -0.68
TRIM39-206ENST00000420746 API5Q9BZZ5 524 aaKnown RBP10.81□□□□□ -0.68
TRIM39-206ENST00000420746 CLEC1BQ9P126 229 aa10.81□□□□□ -0.68
TRIM39-206ENST00000420746 ADD3Q9UEY8 706 aaKnown RBP10.81□□□□□ -0.68
TRIM39-206ENST00000420746 DBNLQ9UJU6 430 aaKnown RBP10.81□□□□□ -0.68
TRIM39-206ENST00000420746 MICAL3Q7RTP6 2002 aa10.8□□□□□ -0.68
TRIM39-206ENST00000420746 LINC01565O15544 149 aa10.8□□□□□ -0.68
TRIM39-206ENST00000420746 CTNNB1P35222 781 aa10.8□□□□□ -0.68
TRIM39-206ENST00000420746 BMPR1AP36894 532 aa10.8□□□□□ -0.68
TRIM39-206ENST00000420746 MBTPS1Q14703 1052 aa10.8□□□□□ -0.68
TRIM39-206ENST00000420746 TTF1Q15361 905 aaPredicted RBP10.8□□□□□ -0.68
TRIM39-206ENST00000420746 ST3GAL2Q16842 350 aa10.8□□□□□ -0.68
TRIM39-206ENST00000420746 LRRC47Q8N1G4 583 aaKnown RBP10.8□□□□□ -0.68
TRIM39-206ENST00000420746 EFHBQ8N7U6 833 aa10.8□□□□□ -0.68
TRIM39-206ENST00000420746 ANTXR1Q9H6X2 564 aa10.8□□□□□ -0.68
TRIM39-206ENST00000420746 GTF2IRD1Q9UHL9 959 aa10.8□□□□□ -0.68
TRIM39-206ENST00000420746 USP15Q9Y4E8 981 aaPredicted RBP10.8□□□□□ -0.68
TRIM39-206ENST00000420746 DDX49Q9Y6V7 483 aaKnown RBP10.8□□□□□ -0.68
TRIM39-206ENST00000420746 GREB1LQ9C091 1923 aaPredicted RBP10.8□□□□□ -0.68
TRIM39-206ENST00000420746 GRM6O15303 877 aa10.79□□□□□ -0.68
TRIM39-206ENST00000420746 LINC00271P0C7V0 271 aa10.79□□□□□ -0.68
TRIM39-206ENST00000420746 PDE6AP16499 860 aa10.79□□□□□ -0.68
TRIM39-206ENST00000420746 GTF2F1P35269 517 aaKnown RBP eCLIP10.79□□□□□ -0.68
TRIM39-206ENST00000420746 CLCN5P51795 746 aa10.79□□□□□ -0.68
TRIM39-206ENST00000420746 TRIM71Q2Q1W2 868 aaKnown RBP10.79□□□□□ -0.68
TRIM39-206ENST00000420746 CCDC184Q52MB2 194 aa10.79□□□□□ -0.68
TRIM39-206ENST00000420746 PLEKHG4Q58EX7 1191 aa10.79□□□□□ -0.68
TRIM39-206ENST00000420746 SLC9C2Q5TAH2 1124 aa10.79□□□□□ -0.68
TRIM39-206ENST00000420746 ASTLQ6HA08 431 aaPredicted RBP10.79□□□□□ -0.68
TRIM39-206ENST00000420746 LCORLQ8N3X6 602 aa10.79□□□□□ -0.68
TRIM39-206ENST00000420746 GMCL1P1Q8NEA9 526 aa10.79□□□□□ -0.68
TRIM39-206ENST00000420746 DBF4BQ8NFT6 615 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms