RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 CCAR2Q8N163 923 aaKnown RBP14.57□□□□□ -0.08
LINC00642-201ENST00000419459 PAGR1Q9BTK6 254 aa14.57□□□□□ -0.08
LINC00642-201ENST00000419459 AMNQ9BXJ7 453 aa14.57□□□□□ -0.08
LINC00642-201ENST00000419459 L2HGDHQ9H9P8 463 aa14.57□□□□□ -0.08
LINC00642-201ENST00000419459 RIPK3Q9Y572 518 aa14.57□□□□□ -0.08
LINC00642-201ENST00000419459 MYH15Q9Y2K3 1946 aa14.57□□□□□ -0.08
LINC00642-201ENST00000419459 FAM205CA6NFA0 338 aa14.56□□□□□ -0.08
LINC00642-201ENST00000419459 IGF2BP3O00425 579 aaKnown RBP eCLIP14.56□□□□□ -0.08
LINC00642-201ENST00000419459 XBP1P17861 261 aa14.56□□□□□ -0.08
LINC00642-201ENST00000419459 HERVK_113P62684 666 aa14.56□□□□□ -0.08
LINC00642-201ENST00000419459 ATL3Q6DD88 541 aa14.56□□□□□ -0.08
LINC00642-201ENST00000419459 ZNF592Q92610 1267 aa14.56□□□□□ -0.08
LINC00642-201ENST00000419459 ZNF214Q9UL59 606 aaPredicted RBP14.56□□□□□ -0.08
LINC00642-201ENST00000419459 CCPG1Q9ULG6 757 aa14.56□□□□□ -0.08
LINC00642-201ENST00000419459 A0A0G2JMZ2 1700 aa14.56□□□□□ -0.08
LINC00642-201ENST00000419459 SMCO2A6NFE2 343 aa14.56□□□□□ -0.08
LINC00642-201ENST00000419459 OPLAHO14841 1288 aa14.56□□□□□ -0.08
LINC00642-201ENST00000419459 H2AFXP16104 143 aaPredicted RBP14.56□□□□□ -0.08
LINC00642-201ENST00000419459 CDK11BP21127 795 aaKnown RBP14.56□□□□□ -0.08
LINC00642-201ENST00000419459 CCZ1BP86790 482 aa14.56□□□□□ -0.08
LINC00642-201ENST00000419459 CCZ1P86791 482 aaPredicted RBP14.56□□□□□ -0.08
LINC00642-201ENST00000419459 KIF23Q02241 960 aaPredicted RBP14.56□□□□□ -0.08
LINC00642-201ENST00000419459 NAA30Q147X3 362 aaPredicted RBP14.56□□□□□ -0.08
LINC00642-201ENST00000419459 UBE2SQ16763 222 aa14.56□□□□□ -0.08
LINC00642-201ENST00000419459 EARS2Q5JPH6 523 aaKnown RBP14.56□□□□□ -0.08
LINC00642-201ENST00000419459 PGBD1Q96JS3 809 aa14.56□□□□□ -0.08
LINC00642-201ENST00000419459 TXNRD2Q9NNW7 524 aa14.56□□□□□ -0.08
LINC00642-201ENST00000419459 BTBD7Q9P203 1132 aa14.56□□□□□ -0.08
LINC00642-201ENST00000419459 AOC2O75106 756 aa14.55□□□□□ -0.08
LINC00642-201ENST00000419459 ALAS1P13196 640 aa14.55□□□□□ -0.08
LINC00642-201ENST00000419459 GNL2Q13823 731 aaKnown RBP14.55□□□□□ -0.08
LINC00642-201ENST00000419459 SNRNP48Q6IEG0 339 aaKnown RBP14.55□□□□□ -0.08
LINC00642-201ENST00000419459 USP17L6PQ6QN14 398 aa14.55□□□□□ -0.08
LINC00642-201ENST00000419459 REPS2Q8NFH8 660 aa14.55□□□□□ -0.08
LINC00642-201ENST00000419459 SMCR8Q8TEV9 937 aaPredicted RBP14.55□□□□□ -0.08
LINC00642-201ENST00000419459 R3HDMLQ9H3Y0 253 aa14.55□□□□□ -0.08
LINC00642-201ENST00000419459 CREBZFQ9NS37 354 aa14.55□□□□□ -0.08
LINC00642-201ENST00000419459 ANO10Q9NW15 660 aa14.55□□□□□ -0.08
LINC00642-201ENST00000419459 HOXC10Q9NYD6 342 aa14.55□□□□□ -0.08
LINC00642-201ENST00000419459 CTDP1Q9Y5B0 961 aaPredicted RBP14.55□□□□□ -0.08
LINC00642-201ENST00000419459 ECM2O94769 699 aaPredicted RBP14.54□□□□□ -0.08
LINC00642-201ENST00000419459 ICAM1P05362 532 aa14.54□□□□□ -0.08
LINC00642-201ENST00000419459 HOXA13P31271 388 aaPredicted RBP14.54□□□□□ -0.08
LINC00642-201ENST00000419459 RESTQ13127 1097 aa14.54□□□□□ -0.08
LINC00642-201ENST00000419459 TBC1D5Q92609 795 aa14.54□□□□□ -0.08
LINC00642-201ENST00000419459 FTOQ9C0B1 505 aaKnown RBP eCLIP14.54□□□□□ -0.08
LINC00642-201ENST00000419459 NAT10Q9H0A0 1025 aaKnown RBP14.54□□□□□ -0.08
LINC00642-201ENST00000419459 ZMYND12Q9H0C1 365 aa14.54□□□□□ -0.08
LINC00642-201ENST00000419459 ADAMTS5Q9UNA0 930 aa14.54□□□□□ -0.08
LINC00642-201ENST00000419459 BECN2A8MW95 431 aa14.54□□□□□ -0.08
LINC00642-201ENST00000419459 TULP2O00295 520 aa14.54□□□□□ -0.08
LINC00642-201ENST00000419459 NFIBO00712 420 aa14.54□□□□□ -0.08
LINC00642-201ENST00000419459 ELF2Q15723 593 aa14.54□□□□□ -0.08
LINC00642-201ENST00000419459 DEFB115Q30KQ5 88 aa14.54□□□□□ -0.08
LINC00642-201ENST00000419459 MUM1L1Q5H9M0 696 aa14.54□□□□□ -0.08
LINC00642-201ENST00000419459 CCDC148Q8NFR7 591 aa14.54□□□□□ -0.08
LINC00642-201ENST00000419459 SH3GLB2Q9NR46 395 aa14.54□□□□□ -0.08
LINC00642-201ENST00000419459 TMEM260Q9NX78 707 aa14.54□□□□□ -0.08
LINC00642-201ENST00000419459 BIN2Q9UBW5 565 aaPredicted RBP14.54□□□□□ -0.08
LINC00642-201ENST00000419459 NRDCO43847 1150 aa14.53□□□□□ -0.08
LINC00642-201ENST00000419459 ZBED4O75132 1171 aa14.53□□□□□ -0.08
LINC00642-201ENST00000419459 KRT2P35908 639 aa14.53□□□□□ -0.08
LINC00642-201ENST00000419459 LBX2Q6XYB7 198 aa14.53□□□□□ -0.08
LINC00642-201ENST00000419459 BLIDQ8IZY5 108 aa14.53□□□□□ -0.08
LINC00642-201ENST00000419459 CCDC150Q8NCX0 1101 aa14.53□□□□□ -0.08
LINC00642-201ENST00000419459 CCDC102AQ96A19 550 aa14.53□□□□□ -0.08
LINC00642-201ENST00000419459 TFIP11Q9UBB9 837 aaKnown RBP14.53□□□□□ -0.08
LINC00642-201ENST00000419459 PCDHA4Q9UN74 947 aa14.53□□□□□ -0.08
LINC00642-201ENST00000419459 USP27XA6NNY8 438 aa14.53□□□□□ -0.08
LINC00642-201ENST00000419459 CCP110O43303 1012 aa14.53□□□□□ -0.08
LINC00642-201ENST00000419459 CFBP00751 764 aa14.53□□□□□ -0.08
LINC00642-201ENST00000419459 CYP2C19P33261 490 aa14.53□□□□□ -0.08
LINC00642-201ENST00000419459 SAFBQ15424 915 aaKnown RBP eCLIP14.53□□□□□ -0.08
LINC00642-201ENST00000419459 Q3C1V9 767 aa14.53□□□□□ -0.08
LINC00642-201ENST00000419459 JAKMIP3Q5VZ66 844 aa14.53□□□□□ -0.08
LINC00642-201ENST00000419459 CEP57L1Q8IYX8 460 aa14.53□□□□□ -0.08
LINC00642-201ENST00000419459 ANKRD13CQ8N6S4 541 aa14.53□□□□□ -0.08
LINC00642-201ENST00000419459 CAPNS2Q96L46 248 aa14.53□□□□□ -0.08
LINC00642-201ENST00000419459 PSTPIP2Q9H939 334 aa14.53□□□□□ -0.08
LINC00642-201ENST00000419459 RBPJLQ9UBG7 517 aa14.53□□□□□ -0.08
LINC00642-201ENST00000419459 MYH7BA7E2Y1 1941 aa14.53□□□□□ -0.08
LINC00642-201ENST00000419459 RBBP6Q7Z6E9 1792 aaKnown RBP14.52□□□□□ -0.08
LINC00642-201ENST00000419459 MANSC4A6NHS7 340 aaPredicted RBP14.52□□□□□ -0.09
LINC00642-201ENST00000419459 RASSF10A6NK89 507 aa14.52□□□□□ -0.09
LINC00642-201ENST00000419459 ATP8B1O43520 1251 aa14.52□□□□□ -0.09
LINC00642-201ENST00000419459 OSBPP22059 807 aa14.52□□□□□ -0.09
LINC00642-201ENST00000419459 ADCY7P51828 1080 aa14.52□□□□□ -0.09
LINC00642-201ENST00000419459 IRX5P78411 483 aaPredicted RBP14.52□□□□□ -0.09
LINC00642-201ENST00000419459 CEBPZQ03701 1054 aaKnown RBP14.52□□□□□ -0.09
LINC00642-201ENST00000419459 PABPC4Q13310 644 aaKnown RBP eCLIP14.52□□□□□ -0.09
LINC00642-201ENST00000419459 SNW1Q13573 536 aaKnown RBP14.52□□□□□ -0.09
LINC00642-201ENST00000419459 PIK3AP1Q6ZUJ8 805 aa14.52□□□□□ -0.09
LINC00642-201ENST00000419459 ANKRD23Q86SG2 305 aa14.52□□□□□ -0.09
LINC00642-201ENST00000419459 NOSTRINQ8IVI9 506 aa14.52□□□□□ -0.09
LINC00642-201ENST00000419459 CCDC12Q8WUD4 166 aaPredicted RBP14.52□□□□□ -0.09
LINC00642-201ENST00000419459 HHIPL1Q96JK4 782 aa14.52□□□□□ -0.09
LINC00642-201ENST00000419459 TEX13BQ9BXU2 312 aa14.52□□□□□ -0.09
LINC00642-201ENST00000419459 MYPNQ86TC9 1320 aa14.52□□□□□ -0.09
LINC00642-201ENST00000419459 DNAH12Q6ZR08 3092 aa14.52□□□□□ -0.09
LINC00642-201ENST00000419459 hCG_1984214I3L0E3 225 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms