RNA–Protein interactions for RNA: ENST00000419437.5

THUMPD3-204, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-204ENST00000419437 SMPD1P17405 629 aa13.59□□□□□ -0.23
THUMPD3-204ENST00000419437 PTGS1P23219 599 aa13.59□□□□□ -0.23
THUMPD3-204ENST00000419437 EPHB4P54760 987 aa13.59□□□□□ -0.23
THUMPD3-204ENST00000419437 GJA9P57773 515 aa13.59□□□□□ -0.23
THUMPD3-204ENST00000419437 BEX3Q00994 111 aa13.59□□□□□ -0.23
THUMPD3-204ENST00000419437 PDE4DQ08499 809 aa13.59□□□□□ -0.23
THUMPD3-204ENST00000419437 SLC35G1Q2M3R5 365 aa13.59□□□□□ -0.23
THUMPD3-204ENST00000419437 TMEM63BQ5T3F8 832 aa13.59□□□□□ -0.23
THUMPD3-204ENST00000419437 CCSAPQ6IQ19 270 aaPredicted RBP13.59□□□□□ -0.23
THUMPD3-204ENST00000419437 RASEFQ8IZ41 740 aa13.59□□□□□ -0.23
THUMPD3-204ENST00000419437 ZNF654Q8IZM8 581 aa13.59□□□□□ -0.23
THUMPD3-204ENST00000419437 PCSK9Q8NBP7 692 aaKnown RBP13.59□□□□□ -0.23
THUMPD3-204ENST00000419437 MORC4Q8TE76 937 aa13.59□□□□□ -0.23
THUMPD3-204ENST00000419437 TMEM87BQ96K49 555 aa13.59□□□□□ -0.23
THUMPD3-204ENST00000419437 TAAR1Q96RJ0 339 aa13.59□□□□□ -0.23
THUMPD3-204ENST00000419437 AP5M1Q9H0R1 490 aa13.59□□□□□ -0.23
THUMPD3-204ENST00000419437 RIOX1Q9H6W3 641 aa13.59□□□□□ -0.23
THUMPD3-204ENST00000419437 VTA1Q9NP79 307 aa13.59□□□□□ -0.23
THUMPD3-204ENST00000419437 PCDHA1Q9Y5I3 950 aa13.59□□□□□ -0.23
THUMPD3-204ENST00000419437 B4DLN1 442 aa13.58□□□□□ -0.24
THUMPD3-204ENST00000419437 SH2B2O14492 632 aaPredicted RBP13.58□□□□□ -0.24
THUMPD3-204ENST00000419437 CYTH3O43739 400 aa13.58□□□□□ -0.24
THUMPD3-204ENST00000419437 PPP1R11O60927 126 aaPredicted RBP13.58□□□□□ -0.24
THUMPD3-204ENST00000419437 TIMP1P01033 207 aa13.58□□□□□ -0.24
THUMPD3-204ENST00000419437 ASGR1P07306 291 aa13.58□□□□□ -0.24
THUMPD3-204ENST00000419437 MRPL12P52815 198 aaKnown RBP13.58□□□□□ -0.24
THUMPD3-204ENST00000419437 RAB11FIP4Q86YS3 637 aa13.58□□□□□ -0.24
THUMPD3-204ENST00000419437 DNERQ8NFT8 737 aa13.58□□□□□ -0.24
THUMPD3-204ENST00000419437 CTCFLQ8NI51 663 aaPredicted RBP13.58□□□□□ -0.24
THUMPD3-204ENST00000419437 SYTL5Q8TDW5 730 aaPredicted RBP13.58□□□□□ -0.24
THUMPD3-204ENST00000419437 SYMPKQ92797 1274 aaKnown RBP13.58□□□□□ -0.24
THUMPD3-204ENST00000419437 MTMR8Q96EF0 704 aa13.58□□□□□ -0.24
THUMPD3-204ENST00000419437 GLT1D1Q96MS3 346 aa13.58□□□□□ -0.24
THUMPD3-204ENST00000419437 NEK1Q96PY6 1258 aa13.58□□□□□ -0.24
THUMPD3-204ENST00000419437 MPHOSPH6Q99547 160 aaKnown RBP13.58□□□□□ -0.24
THUMPD3-204ENST00000419437 MTA3Q9BTC8 594 aa13.58□□□□□ -0.24
THUMPD3-204ENST00000419437 WDR11Q9BZH6 1224 aa13.58□□□□□ -0.24
THUMPD3-204ENST00000419437 UPF3AQ9H1J1 476 aaKnown RBP13.58□□□□□ -0.24
THUMPD3-204ENST00000419437 TBX21Q9UL17 535 aa13.58□□□□□ -0.24
THUMPD3-204ENST00000419437 GNEQ9Y223 722 aaKnown RBP13.58□□□□□ -0.24
THUMPD3-204ENST00000419437 LOC102724159A0A0B4J2E5 919 aa13.57□□□□□ -0.24
THUMPD3-204ENST00000419437 PNMA6FA0A0J9YX94 578 aa13.57□□□□□ -0.24
THUMPD3-204ENST00000419437 RXRAP19793 462 aa13.57□□□□□ -0.24
THUMPD3-204ENST00000419437 DNAJB2P25686 324 aa13.57□□□□□ -0.24
THUMPD3-204ENST00000419437 LIFRP42702 1097 aa13.57□□□□□ -0.24
THUMPD3-204ENST00000419437 CDK7P50613 346 aa13.57□□□□□ -0.24
THUMPD3-204ENST00000419437 PWP2Q15269 919 aaKnown RBP13.57□□□□□ -0.24
THUMPD3-204ENST00000419437 ADCK5Q3MIX3 580 aa13.57□□□□□ -0.24
THUMPD3-204ENST00000419437 MFSD5Q6N075 450 aa13.57□□□□□ -0.24
THUMPD3-204ENST00000419437 TCEANC2Q96MN5 208 aa13.57□□□□□ -0.24
THUMPD3-204ENST00000419437 RMDN3Q96TC7 470 aa13.57□□□□□ -0.24
THUMPD3-204ENST00000419437 COL20A1Q9P218 1284 aa13.57□□□□□ -0.24
THUMPD3-204ENST00000419437 CTAGE5O15320 804 aa13.56□□□□□ -0.24
THUMPD3-204ENST00000419437 DDAH1O94760 285 aa13.56□□□□□ -0.24
THUMPD3-204ENST00000419437 KIF5BP33176 963 aa13.56□□□□□ -0.24
THUMPD3-204ENST00000419437 NKX3-2P78367 333 aa13.56□□□□□ -0.24
THUMPD3-204ENST00000419437 EXOSC10Q01780 885 aaKnown RBP13.56□□□□□ -0.24
THUMPD3-204ENST00000419437 PPIGQ13427 754 aaKnown RBP eCLIP13.56□□□□□ -0.24
THUMPD3-204ENST00000419437 TSGA10IPQ3SY00 556 aa13.56□□□□□ -0.24
THUMPD3-204ENST00000419437 ARHGEF16Q5VV41 709 aa13.56□□□□□ -0.24
THUMPD3-204ENST00000419437 ERICH6BQ5W0A0 696 aa13.56□□□□□ -0.24
THUMPD3-204ENST00000419437 TLK2Q86UE8 772 aa13.56□□□□□ -0.24
THUMPD3-204ENST00000419437 CMTR1Q8N1G2 835 aaKnown RBP13.56□□□□□ -0.24
THUMPD3-204ENST00000419437 CCDC82Q8N4S0 544 aa13.56□□□□□ -0.24
THUMPD3-204ENST00000419437 NSUN6Q8TEA1 469 aaKnown RBP13.56□□□□□ -0.24
THUMPD3-204ENST00000419437 MAP3K14Q99558 947 aa13.56□□□□□ -0.24
THUMPD3-204ENST00000419437 MAF1Q9H063 256 aa13.56□□□□□ -0.24
THUMPD3-204ENST00000419437 SLC12A7Q9Y666 1083 aa13.56□□□□□ -0.24
THUMPD3-204ENST00000419437 NCOR1O75376 2440 aa13.56□□□□□ -0.24
THUMPD3-204ENST00000419437 OPLAHO14841 1288 aa13.55□□□□□ -0.24
THUMPD3-204ENST00000419437 CALM1P0DP23 149 aa13.55□□□□□ -0.24
THUMPD3-204ENST00000419437 CALM2P0DP24 149 aa13.55□□□□□ -0.24
THUMPD3-204ENST00000419437 CALM3P0DP25 149 aa13.55□□□□□ -0.24
THUMPD3-204ENST00000419437 EIF2AK2P19525 551 aaKnown RBP13.55□□□□□ -0.24
THUMPD3-204ENST00000419437 EDNRBP24530 442 aa13.55□□□□□ -0.24
THUMPD3-204ENST00000419437 HOXA13P31271 388 aaPredicted RBP13.55□□□□□ -0.24
THUMPD3-204ENST00000419437 GNAQP50148 359 aa13.55□□□□□ -0.24
THUMPD3-204ENST00000419437 TRAF1Q13077 416 aa13.55□□□□□ -0.24
THUMPD3-204ENST00000419437 KRT32Q14532 448 aa13.55□□□□□ -0.24
THUMPD3-204ENST00000419437 FSCN1Q16658 493 aaKnown RBP13.55□□□□□ -0.24
THUMPD3-204ENST00000419437 DUSP28Q4G0W2 176 aa13.55□□□□□ -0.24
THUMPD3-204ENST00000419437 RASIP1Q5U651 963 aa13.55□□□□□ -0.24
THUMPD3-204ENST00000419437 CXCL17Q6UXB2 119 aa13.55□□□□□ -0.24
THUMPD3-204ENST00000419437 SYNE3Q6ZMZ3 975 aa13.55□□□□□ -0.24
THUMPD3-204ENST00000419437 DHX32Q7L7V1 743 aaKnown RBP13.55□□□□□ -0.24
THUMPD3-204ENST00000419437 SRBD1Q8N5C6 995 aaKnown RBP13.55□□□□□ -0.24
THUMPD3-204ENST00000419437 FANCBQ8NB91 859 aa13.55□□□□□ -0.24
THUMPD3-204ENST00000419437 RRP36Q96EU6 259 aaKnown RBP13.55□□□□□ -0.24
THUMPD3-204ENST00000419437 Q9Y3F1 56 aa13.55□□□□□ -0.24
THUMPD3-204ENST00000419437 MYH6P13533 1939 aa13.54□□□□□ -0.24
THUMPD3-204ENST00000419437 A0A0U1RQG5 324 aaPredicted RBP13.54□□□□□ -0.24
THUMPD3-204ENST00000419437 RBM47A0AV96 593 aaKnown RBP13.54□□□□□ -0.24
THUMPD3-204ENST00000419437 ARVCFO00192 962 aa13.54□□□□□ -0.24
THUMPD3-204ENST00000419437 ZEB2O60315 1214 aa13.54□□□□□ -0.24
THUMPD3-204ENST00000419437 PLEKHA8P1O95397 391 aa13.54□□□□□ -0.24
THUMPD3-204ENST00000419437 TXNP10599 105 aaKnown RBP13.54□□□□□ -0.24
THUMPD3-204ENST00000419437 CPA1P15085 419 aa13.54□□□□□ -0.24
THUMPD3-204ENST00000419437 HSD17B4P51659 736 aa13.54□□□□□ -0.24
THUMPD3-204ENST00000419437 GRIN2CQ14957 1233 aa13.54□□□□□ -0.24
THUMPD3-204ENST00000419437 STXBP2Q15833 593 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms