RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 MAP7D3Q8IWC1 876 aa12.23□□□□□ -0.45
PTCH1-205ENST00000418258 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.23□□□□□ -0.45
PTCH1-205ENST00000418258 FOSP01100 380 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-205ENST00000418258 HSPD1P10809 573 aaKnown RBP12.22□□□□□ -0.45
PTCH1-205ENST00000418258 U2AF2P26368 475 aaKnown RBP eCLIP12.22□□□□□ -0.45
PTCH1-205ENST00000418258 EXOC3L4Q17RC7 722 aa12.22□□□□□ -0.45
PTCH1-205ENST00000418258 ASAP1Q9ULH1 1129 aa12.22□□□□□ -0.45
PTCH1-205ENST00000418258 RFC1P35251 1148 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-205ENST00000418258 SLC12A1Q13621 1099 aa12.22□□□□□ -0.45
PTCH1-205ENST00000418258 OR8K1Q8NGG5 319 aa12.22□□□□□ -0.45
PTCH1-205ENST00000418258 FAM114A2Q9NRY5 505 aa12.22□□□□□ -0.45
PTCH1-205ENST00000418258 PNMA3Q9UL41 463 aa12.22□□□□□ -0.45
PTCH1-205ENST00000418258 M0R2C6 588 aa12.22□□□□□ -0.45
PTCH1-205ENST00000418258 PCCAP05165 728 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-205ENST00000418258 CCNYQ8ND76 341 aa12.22□□□□□ -0.45
PTCH1-205ENST00000418258 KCNQ3O43525 872 aa12.22□□□□□ -0.45
PTCH1-205ENST00000418258 ADD1P35611 737 aaKnown RBP12.22□□□□□ -0.45
PTCH1-205ENST00000418258 MFAP3P55082 362 aa12.22□□□□□ -0.45
PTCH1-205ENST00000418258 RNF139Q8WU17 664 aa12.22□□□□□ -0.45
PTCH1-205ENST00000418258 SDCCAG3Q96C92 435 aa12.22□□□□□ -0.45
PTCH1-205ENST00000418258 FTOQ9C0B1 505 aaKnown RBP eCLIP12.22□□□□□ -0.45
PTCH1-205ENST00000418258 GADD45BO75293 160 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-205ENST00000418258 MYO1EQ12965 1108 aa12.22□□□□□ -0.45
PTCH1-205ENST00000418258 DBN1Q16643 649 aa12.22□□□□□ -0.45
PTCH1-205ENST00000418258 ADALQ6DHV7 355 aa12.22□□□□□ -0.45
PTCH1-205ENST00000418258 CABS1Q96KC9 395 aa12.22□□□□□ -0.45
PTCH1-205ENST00000418258 RNF40O75150 1001 aa12.22□□□□□ -0.45
PTCH1-205ENST00000418258 SRGAP2CP0DJJ0 459 aa12.22□□□□□ -0.45
PTCH1-205ENST00000418258 PFKFB1P16118 471 aa12.22□□□□□ -0.45
PTCH1-205ENST00000418258 OSTNP61366 133 aa12.22□□□□□ -0.45
PTCH1-205ENST00000418258 ABCA5Q8WWZ7 1642 aa12.22□□□□□ -0.45
PTCH1-205ENST00000418258 CEP170P1Q96L14 293 aa12.22□□□□□ -0.45
PTCH1-205ENST00000418258 ARHGEF12Q9NZN5 1544 aa12.22□□□□□ -0.45
PTCH1-205ENST00000418258 A0A0D9SFI3 127 aa12.21□□□□□ -0.45
PTCH1-205ENST00000418258 ARHGEF37A1IGU5 675 aa12.21□□□□□ -0.45
PTCH1-205ENST00000418258 ZNF853P0CG23 659 aa12.21□□□□□ -0.45
PTCH1-205ENST00000418258 PPP2R5EQ16537 467 aa12.21□□□□□ -0.45
PTCH1-205ENST00000418258 CC2D2BQ6DHV5 1058 aa12.21□□□□□ -0.45
PTCH1-205ENST00000418258 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.21□□□□□ -0.45
PTCH1-205ENST00000418258 FAM71BQ8TC56 605 aa12.21□□□□□ -0.45
PTCH1-205ENST00000418258 LRRC4Q9HBW1 653 aa12.21□□□□□ -0.45
PTCH1-205ENST00000418258 USP17L3A6NCW0 530 aa12.21□□□□□ -0.45
PTCH1-205ENST00000418258 USP17L4A6NCW7 530 aa12.21□□□□□ -0.45
PTCH1-205ENST00000418258 PHKA1P46020 1223 aa12.21□□□□□ -0.45
PTCH1-205ENST00000418258 KCNQ4P56696 695 aa12.21□□□□□ -0.45
PTCH1-205ENST00000418258 IL1RL1Q01638 556 aa12.21□□□□□ -0.45
PTCH1-205ENST00000418258 USP17L1Q7RTZ2 530 aa12.21□□□□□ -0.45
PTCH1-205ENST00000418258 DDX27Q96GQ7 796 aaKnown RBP12.21□□□□□ -0.45
PTCH1-205ENST00000418258 GDAP1L1Q96MZ0 367 aa12.21□□□□□ -0.45
PTCH1-205ENST00000418258 ADORA1P30542 326 aa12.21□□□□□ -0.45
PTCH1-205ENST00000418258 INPP5BP32019 993 aa12.21□□□□□ -0.45
PTCH1-205ENST00000418258 LRRC43Q8N309 656 aa12.21□□□□□ -0.45
PTCH1-205ENST00000418258 MCUQ8NE86 351 aa12.21□□□□□ -0.45
PTCH1-205ENST00000418258 SYMPKQ92797 1274 aaKnown RBP12.21□□□□□ -0.45
PTCH1-205ENST00000418258 CDHR1Q96JP9 859 aa12.21□□□□□ -0.45
PTCH1-205ENST00000418258 TESK2Q96S53 571 aa12.21□□□□□ -0.45
PTCH1-205ENST00000418258 BNIP3LO60238 219 aa12.21□□□□□ -0.45
PTCH1-205ENST00000418258 MGEA5O60502 916 aa12.21□□□□□ -0.45
PTCH1-205ENST00000418258 PDE8BO95263 885 aa12.21□□□□□ -0.45
PTCH1-205ENST00000418258 MYL3P08590 195 aa12.21□□□□□ -0.45
PTCH1-205ENST00000418258 BPIFB4P59827 614 aa12.21□□□□□ -0.45
PTCH1-205ENST00000418258 CCDC93Q567U6 631 aa12.21□□□□□ -0.45
PTCH1-205ENST00000418258 PGBD1Q96JS3 809 aa12.21□□□□□ -0.45
PTCH1-205ENST00000418258 CLCN1P35523 988 aa12.21□□□□□ -0.46
PTCH1-205ENST00000418258 SLC16A2P36021 539 aa12.21□□□□□ -0.46
PTCH1-205ENST00000418258 MAP3K21Q5TCX8 1036 aa12.21□□□□□ -0.46
PTCH1-205ENST00000418258 PDZD8Q8NEN9 1154 aa12.21□□□□□ -0.46
PTCH1-205ENST00000418258 EEF2KMTQ96G04 330 aa12.21□□□□□ -0.46
PTCH1-205ENST00000418258 RIPOR2Q9Y4F9 1068 aa12.21□□□□□ -0.46
PTCH1-205ENST00000418258 PNMA8AQ86V59 439 aaPredicted RBP12.21□□□□□ -0.46
PTCH1-205ENST00000418258 DNAAF3Q8N9W5 541 aa12.21□□□□□ -0.46
PTCH1-205ENST00000418258 NLRP4Q96MN2 994 aa12.21□□□□□ -0.46
PTCH1-205ENST00000418258 VCX3AQ9NNX9 186 aa12.21□□□□□ -0.46
PTCH1-205ENST00000418258 OGFRQ9NZT2 677 aa12.21□□□□□ -0.46
PTCH1-205ENST00000418258 ADCY9O60503 1353 aa12.21□□□□□ -0.46
PTCH1-205ENST00000418258 LONP1P36776 959 aaKnown RBP12.2□□□□□ -0.46
PTCH1-205ENST00000418258 PDE1CQ14123 709 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-205ENST00000418258 ELF2Q15723 593 aa12.2□□□□□ -0.46
PTCH1-205ENST00000418258 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.2□□□□□ -0.46
PTCH1-205ENST00000418258 NT5C1BQ96P26 610 aa12.2□□□□□ -0.46
PTCH1-205ENST00000418258 KIAA1468Q9P260 1216 aa12.2□□□□□ -0.46
PTCH1-205ENST00000418258 TPCN1Q9ULQ1 816 aa12.2□□□□□ -0.46
PTCH1-205ENST00000418258 PPFIA4O75335 1185 aa12.2□□□□□ -0.46
PTCH1-205ENST00000418258 BBOX1O75936 387 aa12.2□□□□□ -0.46
PTCH1-205ENST00000418258 INHBAP08476 426 aa12.2□□□□□ -0.46
PTCH1-205ENST00000418258 COG7P83436 770 aa12.2□□□□□ -0.46
PTCH1-205ENST00000418258 MESDQ14696 234 aa12.2□□□□□ -0.46
PTCH1-205ENST00000418258 MYSM1Q5VVJ2 828 aa12.2□□□□□ -0.46
PTCH1-205ENST00000418258 XPO4Q9C0E2 1151 aaKnown RBP12.2□□□□□ -0.46
PTCH1-205ENST00000418258 MED7O43513 233 aa12.2□□□□□ -0.46
PTCH1-205ENST00000418258 BMP3P12645 472 aa12.2□□□□□ -0.46
PTCH1-205ENST00000418258 IRX4P78413 519 aa12.2□□□□□ -0.46
PTCH1-205ENST00000418258 NXF1Q9UBU9 619 aaKnown RBP12.2□□□□□ -0.46
PTCH1-205ENST00000418258 MTERF2Q49AM1 385 aa12.2□□□□□ -0.46
PTCH1-205ENST00000418258 SHANK2Q9UPX8 1470 aa12.2□□□□□ -0.46
PTCH1-205ENST00000418258 MYO1FO00160 1098 aa12.2□□□□□ -0.46
PTCH1-205ENST00000418258 C2orf69Q8N8R5 385 aa12.2□□□□□ -0.46
PTCH1-205ENST00000418258 GDAP1Q8TB36 358 aa12.2□□□□□ -0.46
PTCH1-205ENST00000418258 LRRN2O75325 713 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 YWHAGP61981 247 aaKnown RBP eCLIP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms