RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 CRISPLD2Q9H0B8 497 aa20.16■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 ZMYND12Q9H0C1 365 aa20.16■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 RIC8AQ9NPQ8 531 aa20.16■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 PXMP2Q9NR77 195 aa20.16■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 RBBP6Q7Z6E9 1792 aaKnown RBP20.16■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 SGPL1O95470 568 aa20.15■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 HOXA13P31271 388 aaPredicted RBP20.15■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 PRAMEF19Q5SWL8 479 aa20.15■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 NOL8Q76FK4 1167 aaKnown RBP20.15■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 NECAB1Q8N987 351 aa20.15■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 VTA1Q9NP79 307 aa20.15■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 DDX20Q9UHI6 824 aaKnown RBP20.15■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 FRMPD4Q14CM0 1322 aa20.15■□□□□ 0.82
COMMD3-BMI1-201ENST00000417470 SMCO2A6NFE2 343 aa20.14■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 ST3GAL1Q11201 340 aa20.14■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 ARHGEF16Q5VV41 709 aa20.14■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 LHX8Q68G74 356 aa20.14■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 USP17L6PQ6QN14 398 aa20.14■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 CCDC148Q8NFR7 591 aa20.14■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 SMARCC2Q8TAQ2 1214 aa20.14■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 PDCD2LQ9BRP1 358 aa20.14■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 LLPHQ9BRT6 129 aaKnown RBP20.14■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 BRCA2P51587 3418 aa20.14■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 RBM47A0AV96 593 aaKnown RBP20.13■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 FOSP01100 380 aaPredicted RBP20.13■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 NR3C2P08235 984 aa20.13■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 AKR1A1P14550 325 aa20.13■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 GNA11P29992 359 aa20.13■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 CLK2P49760 499 aaKnown RBP20.13■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 MCTP2Q6DN12 878 aa20.13■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 VSIG10LQ86VR7 867 aa20.13■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 NSUN7Q8NE18 718 aaKnown RBP20.13■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 U2AF1L4Q8WU68 220 aaKnown RBP20.13■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 DEFB118Q96PH6 123 aa20.13■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 OGDHLQ9ULD0 1010 aa20.13■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 FAM184BQ9ULE4 1060 aa20.13■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 KIAA0100Q14667 2235 aaKnown RBP20.12■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 EIF3JO75822 258 aaKnown RBP20.12■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 MYCP01106 439 aaPredicted RBP20.12■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 ADCY7P51828 1080 aa20.12■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 PDE4DQ08499 809 aa20.12■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 STXBP2Q15833 593 aa20.12■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 IQSEC1Q6DN90 963 aa20.12■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 TAPT1Q6NXT6 567 aa20.12■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 XRRA1Q6P2D8 792 aa20.12■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 FCHSD1Q86WN1 690 aa20.12■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 WASF1Q92558 559 aa20.12■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 C6orf50Q9HD87 102 aa20.12■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 ORC3Q9UBD5 711 aaPredicted RBP20.12■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 POTEFA5A3E0 1075 aa20.11■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 PPFIA3O75145 1194 aa20.11■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 STAM2O75886 525 aa20.11■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 FDPSP14324 419 aaKnown RBP20.11■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 CNGA1P29973 690 aa20.11■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 AP3B2Q13367 1082 aa20.11■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 PGM5Q15124 567 aa20.11■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 GALNT17Q6IS24 598 aa20.11■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 BICD2Q8TD16 824 aa20.11■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 SHISA4Q96DD7 197 aa20.11■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 ZHX1Q9UKY1 873 aaPredicted RBP20.11■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 CD2BP2O95400 341 aaKnown RBP20.1■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 EIF2AK2P19525 551 aaKnown RBP20.1■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 CCDC144BQ3MJ40 725 aa20.1■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 ANKLE1Q8NAG6 615 aa20.1■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 VPS54Q9P1Q0 977 aa20.1■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 PCDHA6Q9UN73 950 aa20.1■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 Q9Y3F1 56 aa20.1■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 PCDHA8Q9Y5H6 950 aa20.1■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 SPDYE3A6NKU9 549 aa20.09■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 DUSP11O75319 330 aaKnown RBP20.09■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 XBP1P17861 261 aa20.09■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 NKX3-2P78367 333 aa20.09■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 CCDC83Q8IWF9 413 aa20.09■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 FBXO16Q8IX29 292 aaPredicted RBP20.09■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 DAGLBQ8NCG7 672 aa20.09■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 TMX3Q96JJ7 454 aa20.09■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 EHMT1Q9H9B1 1298 aa20.09■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 DDX49Q9Y6V7 483 aaKnown RBP20.09■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 MCM3APO60318 1980 aa20.08■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 TFRCP02786 760 aaKnown RBP20.08■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 RARBP10826 455 aa20.08■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 EN2P19622 333 aaPredicted RBP20.08■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 CCND2P30279 289 aa20.08■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 RGS19P49795 217 aa20.08■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 HMGN5P82970 282 aaKnown RBP20.08■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 UBE2SQ16763 222 aa20.08■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 PCNX4Q63HM2 1172 aa20.08■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 SCFD2Q8WU76 684 aa20.08■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 GNEQ9Y223 722 aaKnown RBP20.08■□□□□ 0.81
COMMD3-BMI1-201ENST00000417470 NKRFO15226 690 aaKnown RBP eCLIP20.07■□□□□ 0.82e-8■□□□□ 10.5
COMMD3-BMI1-201ENST00000417470 ADCYAP1R1P41586 468 aa20.07■□□□□ 0.8
COMMD3-BMI1-201ENST00000417470 SOX10P56693 466 aa20.07■□□□□ 0.8
COMMD3-BMI1-201ENST00000417470 NLRP5P59047 1200 aa20.07■□□□□ 0.8
COMMD3-BMI1-201ENST00000417470 TNFAIP2Q03169 654 aa20.07■□□□□ 0.8
COMMD3-BMI1-201ENST00000417470 DUSP28Q4G0W2 176 aa20.07■□□□□ 0.8
COMMD3-BMI1-201ENST00000417470 KCNV1Q6PIU1 500 aa20.07■□□□□ 0.8
COMMD3-BMI1-201ENST00000417470 EEPD1Q7L9B9 569 aa20.07■□□□□ 0.8
COMMD3-BMI1-201ENST00000417470 IL31RAQ8NI17 732 aa20.07■□□□□ 0.8
COMMD3-BMI1-201ENST00000417470 AIFM3Q96NN9 605 aa20.07■□□□□ 0.8
COMMD3-BMI1-201ENST00000417470 PHF20Q9BVI0 1012 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms