RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 STK3Q13188 491 aa12.74□□□□□ -0.37
TM9SF4-203ENST00000417389 PPP2R5BQ15173 497 aa12.74□□□□□ -0.37
TM9SF4-203ENST00000417389 TLK2Q86UE8 772 aa12.74□□□□□ -0.37
TM9SF4-203ENST00000417389 PCSK9Q8NBP7 692 aaKnown RBP12.74□□□□□ -0.37
TM9SF4-203ENST00000417389 IWS1Q96ST2 819 aa12.74□□□□□ -0.37
TM9SF4-203ENST00000417389 TM6SF1Q9BZW5 370 aa12.74□□□□□ -0.37
TM9SF4-203ENST00000417389 KATNBL1Q9H079 304 aa12.74□□□□□ -0.37
TM9SF4-203ENST00000417389 PSTPIP2Q9H939 334 aa12.74□□□□□ -0.37
TM9SF4-203ENST00000417389 PXMP2Q9NR77 195 aa12.74□□□□□ -0.37
TM9SF4-203ENST00000417389 MAP3K20Q9NYL2 800 aaKnown RBP12.74□□□□□ -0.37
TM9SF4-203ENST00000417389 ATP11BQ9Y2G3 1177 aa12.74□□□□□ -0.37
TM9SF4-203ENST00000417389 MCM3APO60318 1980 aa12.74□□□□□ -0.37
TM9SF4-203ENST00000417389 CNTNAP5Q8WYK1 1306 aa12.73□□□□□ -0.37
TM9SF4-203ENST00000417389 CPLX1O14810 134 aa12.73□□□□□ -0.37
TM9SF4-203ENST00000417389 OPLAHO14841 1288 aa12.73□□□□□ -0.37
TM9SF4-203ENST00000417389 ADCY6O43306 1168 aa12.73□□□□□ -0.37
TM9SF4-203ENST00000417389 PPFIA3O75145 1194 aa12.73□□□□□ -0.37
TM9SF4-203ENST00000417389 NR3C2P08235 984 aa12.73□□□□□ -0.37
TM9SF4-203ENST00000417389 TXNP10599 105 aaKnown RBP12.73□□□□□ -0.37
TM9SF4-203ENST00000417389 COL6A1P12109 1028 aa12.73□□□□□ -0.37
TM9SF4-203ENST00000417389 CDC27P30260 824 aa12.73□□□□□ -0.37
TM9SF4-203ENST00000417389 CCND2P30279 289 aa12.73□□□□□ -0.37
TM9SF4-203ENST00000417389 RCAN1P53805 252 aa12.73□□□□□ -0.37
TM9SF4-203ENST00000417389 BEX3Q00994 111 aa12.73□□□□□ -0.37
TM9SF4-203ENST00000417389 TTLL4Q14679 1199 aa12.73□□□□□ -0.37
TM9SF4-203ENST00000417389 KCNA10Q16322 511 aa12.73□□□□□ -0.37
TM9SF4-203ENST00000417389 LRRC26Q2I0M4 334 aa12.73□□□□□ -0.37
TM9SF4-203ENST00000417389 BRDTQ58F21 947 aaPredicted RBP12.73□□□□□ -0.37
TM9SF4-203ENST00000417389 TAPT1Q6NXT6 567 aa12.73□□□□□ -0.37
TM9SF4-203ENST00000417389 SAMD3Q8N6K7 520 aa12.73□□□□□ -0.37
TM9SF4-203ENST00000417389 OR6J1Q8NGC5 347 aa12.73□□□□□ -0.37
TM9SF4-203ENST00000417389 MORC4Q8TE76 937 aa12.73□□□□□ -0.37
TM9SF4-203ENST00000417389 SCFD2Q8WU76 684 aa12.73□□□□□ -0.37
TM9SF4-203ENST00000417389 STARD7Q9NQZ5 370 aa12.73□□□□□ -0.37
TM9SF4-203ENST00000417389 PRKAG2Q9UGJ0 569 aa12.73□□□□□ -0.37
TM9SF4-203ENST00000417389 ZMYND8Q9ULU4 1186 aaPredicted RBP12.73□□□□□ -0.37
TM9SF4-203ENST00000417389 TNRC18O15417 2968 aaPredicted RBP12.73□□□□□ -0.37
TM9SF4-203ENST00000417389 MYADML2A6NDP7 307 aa12.72□□□□□ -0.37
TM9SF4-203ENST00000417389 MOXD2PA6NHM9 499 aa12.72□□□□□ -0.37
TM9SF4-203ENST00000417389 SPDYE3A6NKU9 549 aa12.72□□□□□ -0.37
TM9SF4-203ENST00000417389 ADAMTS4O75173 837 aa12.72□□□□□ -0.37
TM9SF4-203ENST00000417389 SEC24BO95487 1268 aa12.72□□□□□ -0.37
TM9SF4-203ENST00000417389 PTGS1P23219 599 aa12.72□□□□□ -0.37
TM9SF4-203ENST00000417389 EDNRBP24530 442 aa12.72□□□□□ -0.37
TM9SF4-203ENST00000417389 ACLYP53396 1101 aa12.72□□□□□ -0.37
TM9SF4-203ENST00000417389 GJA9P57773 515 aa12.72□□□□□ -0.37
TM9SF4-203ENST00000417389 CHMP4BP1P59074 171 aa12.72□□□□□ -0.37
TM9SF4-203ENST00000417389 ANAPC15P60006 121 aa12.72□□□□□ -0.37
TM9SF4-203ENST00000417389 IRX5P78411 483 aaPredicted RBP12.72□□□□□ -0.37
TM9SF4-203ENST00000417389 FSCN1Q16658 493 aaKnown RBP12.72□□□□□ -0.37
TM9SF4-203ENST00000417389 WWC2Q6AWC2 1192 aa12.72□□□□□ -0.37
TM9SF4-203ENST00000417389 CPLX2Q6PUV4 134 aaKnown RBP12.72□□□□□ -0.37
TM9SF4-203ENST00000417389 USP17L6PQ6QN14 398 aa12.72□□□□□ -0.37
TM9SF4-203ENST00000417389 ZFP91Q96JP5 570 aaPredicted RBP12.72□□□□□ -0.37
TM9SF4-203ENST00000417389 GLT1D1Q96MS3 346 aa12.72□□□□□ -0.37
TM9SF4-203ENST00000417389 SLC26A6Q9BXS9 759 aa12.72□□□□□ -0.37
TM9SF4-203ENST00000417389 NCOA5Q9HCD5 579 aaKnown RBP12.72□□□□□ -0.37
TM9SF4-203ENST00000417389 PRDM5Q9NQX1 630 aaPredicted RBP12.72□□□□□ -0.37
TM9SF4-203ENST00000417389 PHF24Q9UPV7 400 aa12.72□□□□□ -0.37
TM9SF4-203ENST00000417389 MRVI1Q9Y6F6 885 aa12.72□□□□□ -0.37
TM9SF4-203ENST00000417389 CEP290O15078 2479 aa12.72□□□□□ -0.37
TM9SF4-203ENST00000417389 FRMPD3Q5JV73 1810 aa12.72□□□□□ -0.37
TM9SF4-203ENST00000417389 MKI67P46013 3256 aaKnown RBP12.72□□□□□ -0.37
TM9SF4-203ENST00000417389 A0A1W2PQ45 241 aaPredicted RBP12.71□□□□□ -0.37
TM9SF4-203ENST00000417389 A0A1W2PQY0 241 aa12.71□□□□□ -0.37
TM9SF4-203ENST00000417389 EIF3JO75822 258 aaKnown RBP12.71□□□□□ -0.37
TM9SF4-203ENST00000417389 ASGR1P07306 291 aa12.71□□□□□ -0.37
TM9SF4-203ENST00000417389 MYL3P08590 195 aa12.71□□□□□ -0.37
TM9SF4-203ENST00000417389 SYN1P17600 705 aa12.71□□□□□ -0.37
TM9SF4-203ENST00000417389 PDIA3P30101 505 aaKnown RBP12.71□□□□□ -0.37
TM9SF4-203ENST00000417389 RTP1P59025 263 aa12.71□□□□□ -0.37
TM9SF4-203ENST00000417389 TOB2Q14106 344 aaPredicted RBP12.71□□□□□ -0.37
TM9SF4-203ENST00000417389 UBE2SQ16763 222 aa12.71□□□□□ -0.37
TM9SF4-203ENST00000417389 DUSP28Q4G0W2 176 aa12.71□□□□□ -0.37
TM9SF4-203ENST00000417389 TMEM63BQ5T3F8 832 aa12.71□□□□□ -0.37
TM9SF4-203ENST00000417389 SLC39A5Q6ZMH5 540 aa12.71□□□□□ -0.37
TM9SF4-203ENST00000417389 TRIM22Q8IYM9 498 aa12.71□□□□□ -0.37
TM9SF4-203ENST00000417389 PHKBQ93100 1093 aa12.71□□□□□ -0.37
TM9SF4-203ENST00000417389 PDCD2LQ9BRP1 358 aa12.71□□□□□ -0.37
TM9SF4-203ENST00000417389 TSEN34Q9BSV6 310 aaKnown RBP12.71□□□□□ -0.37
TM9SF4-203ENST00000417389 EHMT1Q9H9B1 1298 aa12.71□□□□□ -0.37
TM9SF4-203ENST00000417389 UPF2Q9HAU5 1272 aaKnown RBP12.71□□□□□ -0.37
TM9SF4-203ENST00000417389 NKRFO15226 690 aaKnown RBP eCLIP12.7□□□□□ -0.385e-6■■■□□ 16.1
TM9SF4-203ENST00000417389 SORBS3O60504 671 aa12.7□□□□□ -0.38
TM9SF4-203ENST00000417389 PQBP1O60828 265 aaKnown RBP12.7□□□□□ -0.38
TM9SF4-203ENST00000417389 CPT1AP50416 773 aa12.7□□□□□ -0.38
TM9SF4-203ENST00000417389 ADCY7P51828 1080 aa12.7□□□□□ -0.38
TM9SF4-203ENST00000417389 PGM5Q15124 567 aa12.7□□□□□ -0.38
TM9SF4-203ENST00000417389 ANKRD1Q15327 319 aa12.7□□□□□ -0.38
TM9SF4-203ENST00000417389 LY6KQ17RY6 165 aa12.7□□□□□ -0.38
TM9SF4-203ENST00000417389 GNPTABQ3T906 1256 aa12.7□□□□□ -0.38
TM9SF4-203ENST00000417389 TRIM60Q495X7 471 aa12.7□□□□□ -0.38
TM9SF4-203ENST00000417389 CXCL17Q6UXB2 119 aa12.7□□□□□ -0.38
TM9SF4-203ENST00000417389 FBXL16Q8N461 479 aa12.7□□□□□ -0.38
TM9SF4-203ENST00000417389 KLHDC9Q8NEP7 349 aa12.7□□□□□ -0.38
TM9SF4-203ENST00000417389 COPS5Q92905 334 aa12.7□□□□□ -0.38
TM9SF4-203ENST00000417389 AGXT2Q9BYV1 514 aa12.7□□□□□ -0.38
TM9SF4-203ENST00000417389 UPF3AQ9H1J1 476 aaKnown RBP12.7□□□□□ -0.38
TM9SF4-203ENST00000417389 SLKQ9H2G2 1235 aaPredicted RBP12.7□□□□□ -0.38
TM9SF4-203ENST00000417389 FAM217BQ9NTX9 383 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms