RNA–Protein interactions for RNA: ENST00000416585.1

SNX30-202, Transcript of sorting nexin family member 30, humanhuman

TSL 3

Gene SNX30, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-202ENST00000416585 UBAC1Q9BSL1 405 aa13.28□□□□□ -0.28
SNX30-202ENST00000416585 TSPYL2Q9H2G4 693 aaPredicted RBP13.28□□□□□ -0.28
SNX30-202ENST00000416585 NKX2-4Q9H2Z4 354 aa13.28□□□□□ -0.28
SNX30-202ENST00000416585 CTNNA3Q9UI47 895 aa13.28□□□□□ -0.28
SNX30-202ENST00000416585 PTPRSQ13332 1948 aa13.28□□□□□ -0.28
SNX30-202ENST00000416585 NEDD4P46934 1319 aa13.28□□□□□ -0.28
SNX30-202ENST00000416585 DOCK5Q9H7D0 1870 aa13.27□□□□□ -0.28
SNX30-202ENST00000416585 TCF20Q9UGU0 1960 aaKnown RBP13.27□□□□□ -0.28
SNX30-202ENST00000416585 RBM47A0AV96 593 aaKnown RBP13.27□□□□□ -0.29
SNX30-202ENST00000416585 KDM4AO75164 1064 aa13.27□□□□□ -0.29
SNX30-202ENST00000416585 SNHG28P0DPA3 235 aa13.27□□□□□ -0.29
SNX30-202ENST00000416585 BFSP2Q13515 415 aa13.27□□□□□ -0.29
SNX30-202ENST00000416585 TJAP1Q5JTD0 557 aa13.27□□□□□ -0.29
SNX30-202ENST00000416585 TMEM63BQ5T3F8 832 aa13.27□□□□□ -0.29
SNX30-202ENST00000416585 PPP2R2DQ66LE6 453 aa13.27□□□□□ -0.29
SNX30-202ENST00000416585 DEFB128Q7Z7B8 93 aa13.27□□□□□ -0.29
SNX30-202ENST00000416585 CHD1LQ86WJ1 897 aa13.27□□□□□ -0.29
SNX30-202ENST00000416585 YTHDC1Q96MU7 727 aaKnown RBP13.27□□□□□ -0.29
SNX30-202ENST00000416585 KRT23Q9C075 422 aa13.27□□□□□ -0.29
SNX30-202ENST00000416585 WNT8AQ9H1J5 351 aa13.27□□□□□ -0.29
SNX30-202ENST00000416585 CNNM2Q9H8M5 875 aa13.27□□□□□ -0.29
SNX30-202ENST00000416585 TRMT13Q9NUP7 481 aaKnown RBP13.27□□□□□ -0.29
SNX30-202ENST00000416585 CXXC1Q9P0U4 656 aaPredicted RBP13.27□□□□□ -0.29
SNX30-202ENST00000416585 GRIN2DO15399 1336 aa13.27□□□□□ -0.29
SNX30-202ENST00000416585 LAMA2P24043 3122 aaKnown RBP13.27□□□□□ -0.29
SNX30-202ENST00000416585 B4E1Z4 1266 aa13.26□□□□□ -0.29
SNX30-202ENST00000416585 PARP1P09874 1014 aaKnown RBP13.26□□□□□ -0.29
SNX30-202ENST00000416585 CYP2C9P11712 490 aa13.26□□□□□ -0.29
SNX30-202ENST00000416585 RFC2P35250 354 aa13.26□□□□□ -0.29
SNX30-202ENST00000416585 PTPN11Q06124 597 aaPredicted RBP13.26□□□□□ -0.29
SNX30-202ENST00000416585 NBPF20Q3BBV1 942 aa13.26□□□□□ -0.29
SNX30-202ENST00000416585 NFRKBQ6P4R8 1299 aa13.26□□□□□ -0.29
SNX30-202ENST00000416585 SMC5Q8IY18 1101 aa13.26□□□□□ -0.29
SNX30-202ENST00000416585 RGS22Q8NE09 1264 aa13.26□□□□□ -0.29
SNX30-202ENST00000416585 TET1Q8NFU7 2136 aa13.26□□□□□ -0.29
SNX30-202ENST00000416585 FTOQ9C0B1 505 aaKnown RBP eCLIP13.26□□□□□ -0.29
SNX30-202ENST00000416585 UBA5Q9GZZ9 404 aa13.26□□□□□ -0.29
SNX30-202ENST00000416585 MAF1Q9H063 256 aa13.26□□□□□ -0.29
SNX30-202ENST00000416585 THEGQ9P2T0 379 aa13.26□□□□□ -0.29
SNX30-202ENST00000416585 MRPL11Q9Y3B7 192 aaKnown RBP13.26□□□□□ -0.29
SNX30-202ENST00000416585 BAZ2BQ9UIF8 2168 aaKnown RBP13.25□□□□□ -0.29
SNX30-202ENST00000416585 COL4A4P53420 1690 aaPredicted RBP13.25□□□□□ -0.29
SNX30-202ENST00000416585 GH1P01241 217 aa13.25□□□□□ -0.29
SNX30-202ENST00000416585 ATP2A2P16615 1042 aaKnown RBP13.25□□□□□ -0.29
SNX30-202ENST00000416585 EDNRBP24530 442 aa13.25□□□□□ -0.29
SNX30-202ENST00000416585 STXBP2Q15833 593 aa13.25□□□□□ -0.29
SNX30-202ENST00000416585 ARHGEF16Q5VV41 709 aa13.25□□□□□ -0.29
SNX30-202ENST00000416585 SEPT14Q6ZU15 432 aa13.25□□□□□ -0.29
SNX30-202ENST00000416585 FBXO11Q86XK2 927 aa13.25□□□□□ -0.29
SNX30-202ENST00000416585 NSUN6Q8TEA1 469 aaKnown RBP13.25□□□□□ -0.29
SNX30-202ENST00000416585 ZSCAN10Q96SZ4 725 aaPredicted RBP13.25□□□□□ -0.29
SNX30-202ENST00000416585 DSCC1Q9BVC3 393 aa13.25□□□□□ -0.29
SNX30-202ENST00000416585 OSBPL3Q9H4L5 887 aa13.25□□□□□ -0.29
SNX30-202ENST00000416585 PCDHA11Q9Y5I1 949 aa13.25□□□□□ -0.29
SNX30-202ENST00000416585 SIP14410 1827 aa13.25□□□□□ -0.29
SNX30-202ENST00000416585 MICAL3Q7RTP6 2002 aa13.24□□□□□ -0.29
SNX30-202ENST00000416585 A6NJR5 290 aa13.24□□□□□ -0.29
SNX30-202ENST00000416585 KIF28PB7ZC32 967 aa13.24□□□□□ -0.29
SNX30-202ENST00000416585 CASTP20810 708 aaKnown RBP13.24□□□□□ -0.29
SNX30-202ENST00000416585 RABGGTBP53611 331 aa13.24□□□□□ -0.29
SNX30-202ENST00000416585 NUCB1Q02818 461 aa13.24□□□□□ -0.29
SNX30-202ENST00000416585 TRDNQ13061 729 aa13.24□□□□□ -0.29
SNX30-202ENST00000416585 CCDC85BQ15834 202 aaPredicted RBP13.24□□□□□ -0.29
SNX30-202ENST00000416585 TMEM67Q5HYA8 995 aa13.24□□□□□ -0.29
SNX30-202ENST00000416585 IFIT1BQ5T764 474 aaKnown RBP13.24□□□□□ -0.29
SNX30-202ENST00000416585 CHST3Q7LGC8 479 aa13.24□□□□□ -0.29
SNX30-202ENST00000416585 PLEKHM2Q8IWE5 1019 aa13.24□□□□□ -0.29
SNX30-202ENST00000416585 ADGRF4Q8IZF3 695 aa13.24□□□□□ -0.29
SNX30-202ENST00000416585 MICALL1Q8N3F8 863 aa13.24□□□□□ -0.29
SNX30-202ENST00000416585 USP38Q8NB14 1042 aa13.24□□□□□ -0.29
SNX30-202ENST00000416585 COPS5Q92905 334 aa13.24□□□□□ -0.29
SNX30-202ENST00000416585 IWS1Q96ST2 819 aa13.24□□□□□ -0.29
SNX30-202ENST00000416585 SLC9A7Q96T83 725 aa13.24□□□□□ -0.29
SNX30-202ENST00000416585 RMDN3Q96TC7 470 aa13.24□□□□□ -0.29
SNX30-202ENST00000416585 CPVLQ9H3G5 476 aa13.24□□□□□ -0.29
SNX30-202ENST00000416585 VAT1LQ9HCJ6 419 aa13.24□□□□□ -0.29
SNX30-202ENST00000416585 UNC80Q8N2C7 3258 aa13.24□□□□□ -0.29
SNX30-202ENST00000416585 ERICH2A1L162 156 aa13.23□□□□□ -0.29
SNX30-202ENST00000416585 PITPNM1O00562 1244 aa13.23□□□□□ -0.29
SNX30-202ENST00000416585 GTPBP6O43824 516 aaPredicted RBP13.23□□□□□ -0.29
SNX30-202ENST00000416585 CFBP00751 764 aa13.23□□□□□ -0.29
SNX30-202ENST00000416585 KCNJ6P48051 423 aa13.23□□□□□ -0.29
SNX30-202ENST00000416585 TRAF1Q13077 416 aa13.23□□□□□ -0.29
SNX30-202ENST00000416585 PTGISQ16647 500 aa13.23□□□□□ -0.29
SNX30-202ENST00000416585 QRICH1Q2TAL8 776 aa13.23□□□□□ -0.29
SNX30-202ENST00000416585 ENAHQ8N8S7 591 aaPredicted RBP13.23□□□□□ -0.29
SNX30-202ENST00000416585 ATXN2LQ8WWM7 1075 aaKnown RBP13.23□□□□□ -0.29
SNX30-202ENST00000416585 KATNAL1Q9BW62 490 aa13.23□□□□□ -0.29
SNX30-202ENST00000416585 YBX2Q9Y2T7 364 aaKnown RBP13.23□□□□□ -0.29
SNX30-202ENST00000416585 CUL9Q8IWT3 2517 aa13.23□□□□□ -0.29
SNX30-202ENST00000416585 NLRC5Q86WI3 1866 aa13.23□□□□□ -0.29
SNX30-202ENST00000416585 MMP3P08254 477 aa13.22□□□□□ -0.29
SNX30-202ENST00000416585 EIF2AK2P19525 551 aaKnown RBP13.22□□□□□ -0.29
SNX30-202ENST00000416585 SKIV2LQ15477 1246 aaKnown RBP13.22□□□□□ -0.29
SNX30-202ENST00000416585 DGKDQ16760 1214 aa13.22□□□□□ -0.29
SNX30-202ENST00000416585 CAGE1Q8TC20 777 aa13.22□□□□□ -0.29
SNX30-202ENST00000416585 SYTL5Q8TDW5 730 aaPredicted RBP13.22□□□□□ -0.29
SNX30-202ENST00000416585 AFG1LQ8WV93 481 aa13.22□□□□□ -0.29
SNX30-202ENST00000416585 TAAR1Q96RJ0 339 aa13.22□□□□□ -0.29
SNX30-202ENST00000416585 AMNQ9BXJ7 453 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms