RNA–Protein interactions for RNA: ENST00000415670.1

CDC42EP1-202, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-202ENST00000415670 LRRC37A2A6NM11 1700 aa19.42■□□□□ 0.7
CDC42EP1-202ENST00000415670 TRDNQ13061 729 aa19.41■□□□□ 0.7
CDC42EP1-202ENST00000415670 TMCO2Q7Z6W1 182 aaPredicted RBP19.41■□□□□ 0.7
CDC42EP1-202ENST00000415670 TET1Q8NFU7 2136 aa19.41■□□□□ 0.7
CDC42EP1-202ENST00000415670 JAKMIP1Q96N16 626 aaKnown RBP19.41■□□□□ 0.7
CDC42EP1-202ENST00000415670 KRT23Q9C075 422 aa19.41■□□□□ 0.7
CDC42EP1-202ENST00000415670 ZNF287Q9HBT7 754 aa19.41■□□□□ 0.7
CDC42EP1-202ENST00000415670 FEM1BQ9UK73 627 aa19.41■□□□□ 0.7
CDC42EP1-202ENST00000415670 NEDD4P46934 1319 aa19.41■□□□□ 0.7
CDC42EP1-202ENST00000415670 TMEM232C9JQI7 657 aa19.4■□□□□ 0.7
CDC42EP1-202ENST00000415670 PSMA5P28066 241 aa19.4■□□□□ 0.7
CDC42EP1-202ENST00000415670 NT5C2P49902 561 aa19.4■□□□□ 0.7
CDC42EP1-202ENST00000415670 SLFN13Q68D06 897 aa19.4■□□□□ 0.7
CDC42EP1-202ENST00000415670 NCOA7Q8NI08 942 aa19.4■□□□□ 0.7
CDC42EP1-202ENST00000415670 ARNTL2Q8WYA1 636 aa19.4■□□□□ 0.7
CDC42EP1-202ENST00000415670 MKL1Q969V6 931 aa19.4■□□□□ 0.7
CDC42EP1-202ENST00000415670 NEK1Q96PY6 1258 aa19.4■□□□□ 0.7
CDC42EP1-202ENST00000415670 AP5M1Q9H0R1 490 aa19.4■□□□□ 0.7
CDC42EP1-202ENST00000415670 ALDH8A1Q9H2A2 487 aaPredicted RBP19.4■□□□□ 0.7
CDC42EP1-202ENST00000415670 RNF146Q9NTX7 359 aa19.4■□□□□ 0.7
CDC42EP1-202ENST00000415670 MTMR4Q9NYA4 1195 aa19.4■□□□□ 0.7
CDC42EP1-202ENST00000415670 B4E1Z4 1266 aa19.39■□□□□ 0.69
CDC42EP1-202ENST00000415670 HMGB1P09429 215 aaKnown RBP19.39■□□□□ 0.69
CDC42EP1-202ENST00000415670 ALAS1P13196 640 aa19.39■□□□□ 0.69
CDC42EP1-202ENST00000415670 MB21D2Q8IYB1 491 aaPredicted RBP19.39■□□□□ 0.69
CDC42EP1-202ENST00000415670 C1QTNF1Q9BXJ1 281 aa19.39■□□□□ 0.69
CDC42EP1-202ENST00000415670 ISY1Q9ULR0 285 aaKnown RBP19.39■□□□□ 0.69
CDC42EP1-202ENST00000415670 BMP3P12645 472 aa19.38■□□□□ 0.69
CDC42EP1-202ENST00000415670 CASTP20810 708 aaKnown RBP19.38■□□□□ 0.69
CDC42EP1-202ENST00000415670 TAP1Q03518 808 aa19.38■□□□□ 0.69
CDC42EP1-202ENST00000415670 PTPRSQ13332 1948 aa19.38■□□□□ 0.69
CDC42EP1-202ENST00000415670 TMEM67Q5HYA8 995 aa19.38■□□□□ 0.69
CDC42EP1-202ENST00000415670 RRP12Q5JTH9 1297 aaKnown RBP19.38■□□□□ 0.69
CDC42EP1-202ENST00000415670 BLOC1S2Q6QNY1 142 aa19.38■□□□□ 0.69
CDC42EP1-202ENST00000415670 RALYLQ86SE5 291 aaKnown RBP19.38■□□□□ 0.69
CDC42EP1-202ENST00000415670 TRERF1Q96PN7 1200 aa19.38■□□□□ 0.69
CDC42EP1-202ENST00000415670 TSPYL2Q9H2G4 693 aaPredicted RBP19.38■□□□□ 0.69
CDC42EP1-202ENST00000415670 MTIF3Q9H2K0 278 aaKnown RBP19.38■□□□□ 0.69
CDC42EP1-202ENST00000415670 ACAD9Q9H845 621 aa19.38■□□□□ 0.69
CDC42EP1-202ENST00000415670 ZSWIM6Q9HCJ5 1215 aa19.38■□□□□ 0.69
CDC42EP1-202ENST00000415670 TOMM22Q9NS69 142 aa19.38■□□□□ 0.69
CDC42EP1-202ENST00000415670 FBXO40Q9UH90 709 aa19.38■□□□□ 0.69
CDC42EP1-202ENST00000415670 KCTD1Q719H9 257 aa19.37■□□□□ 0.69
CDC42EP1-202ENST00000415670 RPUSD2Q8IZ73 545 aaKnown RBP19.37■□□□□ 0.69
CDC42EP1-202ENST00000415670 ZNF444Q8N0Y2 327 aaPredicted RBP19.37■□□□□ 0.69
CDC42EP1-202ENST00000415670 ESR2Q92731 530 aa19.37■□□□□ 0.69
CDC42EP1-202ENST00000415670 LCHNA4D1U4 455 aa19.36■□□□□ 0.69
CDC42EP1-202ENST00000415670 RANBP6O60518 1105 aaKnown RBP19.36■□□□□ 0.69
CDC42EP1-202ENST00000415670 LPXNO60711 386 aa19.36■□□□□ 0.69
CDC42EP1-202ENST00000415670 KDM4AO75164 1064 aa19.36■□□□□ 0.69
CDC42EP1-202ENST00000415670 CABYRO75952 493 aa19.36■□□□□ 0.69
CDC42EP1-202ENST00000415670 GRB10Q13322 594 aa19.36■□□□□ 0.69
CDC42EP1-202ENST00000415670 COL9A3Q14050 684 aaPredicted RBP19.36■□□□□ 0.69
CDC42EP1-202ENST00000415670 RABEP1Q15276 862 aa19.36■□□□□ 0.69
CDC42EP1-202ENST00000415670 RUFY3Q7L099 469 aa19.36■□□□□ 0.69
CDC42EP1-202ENST00000415670 DHX32Q7L7V1 743 aaKnown RBP19.36■□□□□ 0.69
CDC42EP1-202ENST00000415670 ZSWIM5Q9P217 1185 aa19.36■□□□□ 0.69
CDC42EP1-202ENST00000415670 MTMR7Q9Y216 660 aa19.36■□□□□ 0.69
CDC42EP1-202ENST00000415670 CYP46A1Q9Y6A2 500 aa19.36■□□□□ 0.69
CDC42EP1-202ENST00000415670 TRIP12Q14669 1992 aaPredicted RBP19.35■□□□□ 0.69
CDC42EP1-202ENST00000415670 BRWD1Q9NSI6 2320 aa19.35■□□□□ 0.69
CDC42EP1-202ENST00000415670 TNKSO95271 1327 aa19.35■□□□□ 0.69
CDC42EP1-202ENST00000415670 WDR19Q8NEZ3 1342 aa19.35■□□□□ 0.69
CDC42EP1-202ENST00000415670 NMT2O60551 498 aa19.35■□□□□ 0.69
CDC42EP1-202ENST00000415670 MYL3P08590 195 aa19.35■□□□□ 0.69
CDC42EP1-202ENST00000415670 POU3F3P20264 500 aaPredicted RBP19.35■□□□□ 0.69
CDC42EP1-202ENST00000415670 RPS6KB1P23443 525 aa19.35■□□□□ 0.69
CDC42EP1-202ENST00000415670 MCM5P33992 734 aa19.35■□□□□ 0.69
CDC42EP1-202ENST00000415670 OAZ1P54368 228 aa19.35■□□□□ 0.69
CDC42EP1-202ENST00000415670 TCTN1Q2MV58 587 aa19.35■□□□□ 0.69
CDC42EP1-202ENST00000415670 IQSEC1Q6DN90 963 aa19.35■□□□□ 0.69
CDC42EP1-202ENST00000415670 CYB5R4Q7L1T6 521 aa19.35■□□□□ 0.69
CDC42EP1-202ENST00000415670 GMCL1P1Q8NEA9 526 aa19.35■□□□□ 0.69
CDC42EP1-202ENST00000415670 COPS5Q92905 334 aa19.35■□□□□ 0.69
CDC42EP1-202ENST00000415670 UPF3BQ9BZI7 483 aaKnown RBP19.35■□□□□ 0.69
CDC42EP1-202ENST00000415670 CYP39A1Q9NYL5 469 aa19.35■□□□□ 0.69
CDC42EP1-202ENST00000415670 PLIN4Q96Q06 1357 aa19.34■□□□□ 0.69
CDC42EP1-202ENST00000415670 ASB14A6NK59 587 aa19.34■□□□□ 0.69
CDC42EP1-202ENST00000415670 TSPY2A6NKD2 308 aa19.34■□□□□ 0.69
CDC42EP1-202ENST00000415670 TTLL1O95922 423 aa19.34■□□□□ 0.69
CDC42EP1-202ENST00000415670 CPA1P15085 419 aa19.34■□□□□ 0.69
CDC42EP1-202ENST00000415670 ANTXR2P58335 489 aa19.34■□□□□ 0.69
CDC42EP1-202ENST00000415670 TFAP4Q01664 338 aa19.34■□□□□ 0.69
CDC42EP1-202ENST00000415670 EXOSC10Q01780 885 aaKnown RBP19.34■□□□□ 0.69
CDC42EP1-202ENST00000415670 TSHZ2Q9NRE2 1034 aa19.34■□□□□ 0.69
CDC42EP1-202ENST00000415670 PRC1O43663 620 aa19.33■□□□□ 0.68
CDC42EP1-202ENST00000415670 PURAQ00577 322 aaKnown RBP19.33■□□□□ 0.68
CDC42EP1-202ENST00000415670 IKQ13123 557 aaPredicted RBP19.33■□□□□ 0.68
CDC42EP1-202ENST00000415670 GPNMBQ14956 572 aa19.33■□□□□ 0.68
CDC42EP1-202ENST00000415670 NBPF20Q3BBV1 942 aa19.33■□□□□ 0.68
CDC42EP1-202ENST00000415670 TMEM31Q5JXX7 168 aa19.33■□□□□ 0.68
CDC42EP1-202ENST00000415670 TTBK2Q6IQ55 1244 aa19.33■□□□□ 0.68
CDC42EP1-202ENST00000415670 NSMFQ6X4W1 530 aa19.33■□□□□ 0.68
CDC42EP1-202ENST00000415670 NEDD1Q8NHV4 660 aa19.33■□□□□ 0.68
CDC42EP1-202ENST00000415670 MTA3Q9BTC8 594 aa19.33■□□□□ 0.68
CDC42EP1-202ENST00000415670 TSPY3P0CV98 308 aa19.32■□□□□ 0.68
CDC42EP1-202ENST00000415670 TSPY8P0CW00 308 aa19.32■□□□□ 0.68
CDC42EP1-202ENST00000415670 NEK4P51957 841 aa19.32■□□□□ 0.68
CDC42EP1-202ENST00000415670 BAATQ14032 418 aaPredicted RBP19.32■□□□□ 0.68
CDC42EP1-202ENST00000415670 AAK1Q2M2I8 961 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms