RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 SMCO2A6NFE2 343 aa13.68□□□□□ -0.22
ATG4B-207ENST00000415107 M0R2N6 131 aa13.68□□□□□ -0.22
ATG4B-207ENST00000415107 JAK2O60674 1132 aa13.68□□□□□ -0.22
ATG4B-207ENST00000415107 STAM2O75886 525 aa13.68□□□□□ -0.22
ATG4B-207ENST00000415107 ECM2O94769 699 aaPredicted RBP13.68□□□□□ -0.22
ATG4B-207ENST00000415107 INHAP05111 366 aa13.68□□□□□ -0.22
ATG4B-207ENST00000415107 CALML3P27482 149 aa13.68□□□□□ -0.22
ATG4B-207ENST00000415107 ADCY7P51828 1080 aa13.68□□□□□ -0.22
ATG4B-207ENST00000415107 ARMCX2Q7L311 632 aa13.68□□□□□ -0.22
ATG4B-207ENST00000415107 RMDN3Q96TC7 470 aa13.68□□□□□ -0.22
ATG4B-207ENST00000415107 PDCD2LQ9BRP1 358 aa13.68□□□□□ -0.22
ATG4B-207ENST00000415107 PHF20Q9BVI0 1012 aa13.68□□□□□ -0.22
ATG4B-207ENST00000415107 ABHD16BQ9H3Z7 469 aa13.68□□□□□ -0.22
ATG4B-207ENST00000415107 PXMP2Q9NR77 195 aa13.68□□□□□ -0.22
ATG4B-207ENST00000415107 VPS54Q9P1Q0 977 aa13.68□□□□□ -0.22
ATG4B-207ENST00000415107 SNAI1O95863 264 aaPredicted RBP13.67□□□□□ -0.22
ATG4B-207ENST00000415107 ELNP15502 786 aa13.67□□□□□ -0.22
ATG4B-207ENST00000415107 USP17L6PQ6QN14 398 aa13.67□□□□□ -0.22
ATG4B-207ENST00000415107 REXO1Q8N1G1 1221 aaKnown RBP13.67□□□□□ -0.22
ATG4B-207ENST00000415107 CRYGNQ8WXF5 182 aa13.67□□□□□ -0.22
ATG4B-207ENST00000415107 TAAR1Q96RJ0 339 aa13.67□□□□□ -0.22
ATG4B-207ENST00000415107 ALG1Q9BT22 464 aa13.67□□□□□ -0.22
ATG4B-207ENST00000415107 VTA1Q9NP79 307 aa13.67□□□□□ -0.22
ATG4B-207ENST00000415107 PAK6Q9NQU5 681 aaPredicted RBP13.67□□□□□ -0.22
ATG4B-207ENST00000415107 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.67□□□□□ -0.22
ATG4B-207ENST00000415107 PCDHA4Q9UN74 947 aa13.67□□□□□ -0.22
ATG4B-207ENST00000415107 RBM47A0AV96 593 aaKnown RBP13.66□□□□□ -0.22
ATG4B-207ENST00000415107 SPDYE3A6NKU9 549 aa13.66□□□□□ -0.22
ATG4B-207ENST00000415107 MSCO60682 206 aa13.66□□□□□ -0.22
ATG4B-207ENST00000415107 ZNF865P0CJ78 1059 aaPredicted RBP13.66□□□□□ -0.22
ATG4B-207ENST00000415107 PRKAR2AP13861 404 aaKnown RBP13.66□□□□□ -0.22
ATG4B-207ENST00000415107 HOXA13P31271 388 aaPredicted RBP13.66□□□□□ -0.22
ATG4B-207ENST00000415107 CACNB2Q08289 660 aaPredicted RBP13.66□□□□□ -0.22
ATG4B-207ENST00000415107 PGM5Q15124 567 aa13.66□□□□□ -0.22
ATG4B-207ENST00000415107 VSIG10LQ86VR7 867 aa13.66□□□□□ -0.22
ATG4B-207ENST00000415107 HSCBQ8IWL3 235 aa13.66□□□□□ -0.22
ATG4B-207ENST00000415107 EHMT1Q9H9B1 1298 aa13.66□□□□□ -0.22
ATG4B-207ENST00000415107 CNPY2Q9Y2B0 182 aa13.66□□□□□ -0.22
ATG4B-207ENST00000415107 CENPFP49454 3210 aa13.66□□□□□ -0.22
ATG4B-207ENST00000415107 MCM3APO60318 1980 aa13.65□□□□□ -0.22
ATG4B-207ENST00000415107 SEPT4O43236 478 aa13.65□□□□□ -0.22
ATG4B-207ENST00000415107 PPFIA3O75145 1194 aa13.65□□□□□ -0.22
ATG4B-207ENST00000415107 EIF3JO75822 258 aaKnown RBP13.65□□□□□ -0.22
ATG4B-207ENST00000415107 NR3C2P08235 984 aa13.65□□□□□ -0.22
ATG4B-207ENST00000415107 CYP2C19P33261 490 aa13.65□□□□□ -0.22
ATG4B-207ENST00000415107 SREBF1P36956 1147 aa13.65□□□□□ -0.22
ATG4B-207ENST00000415107 NLRP5P59047 1200 aa13.65□□□□□ -0.22
ATG4B-207ENST00000415107 ARHGEF16Q5VV41 709 aa13.65□□□□□ -0.22
ATG4B-207ENST00000415107 PCNX4Q63HM2 1172 aa13.65□□□□□ -0.22
ATG4B-207ENST00000415107 BLIDQ8IZY5 108 aa13.65□□□□□ -0.22
ATG4B-207ENST00000415107 FBXO18Q8NFZ0 1043 aa13.65□□□□□ -0.22
ATG4B-207ENST00000415107 SH3TC2Q8TF17 1288 aa13.65□□□□□ -0.22
ATG4B-207ENST00000415107 AIFM3Q96NN9 605 aa13.65□□□□□ -0.22
ATG4B-207ENST00000415107 PURBQ96QR8 312 aaKnown RBP13.65□□□□□ -0.22
ATG4B-207ENST00000415107 ANO3Q9BYT9 981 aa13.65□□□□□ -0.22
ATG4B-207ENST00000415107 HMX1Q9NP08 348 aaPredicted RBP13.65□□□□□ -0.22
ATG4B-207ENST00000415107 MMP1P03956 469 aa13.64□□□□□ -0.23
ATG4B-207ENST00000415107 CYP3A4P08684 503 aa13.64□□□□□ -0.23
ATG4B-207ENST00000415107 AKR1A1P14550 325 aa13.64□□□□□ -0.23
ATG4B-207ENST00000415107 NKX3-2P78367 333 aa13.64□□□□□ -0.23
ATG4B-207ENST00000415107 PDE4DQ08499 809 aa13.64□□□□□ -0.23
ATG4B-207ENST00000415107 TRIM32Q13049 653 aa13.64□□□□□ -0.23
ATG4B-207ENST00000415107 ACVR2BQ13705 512 aa13.64□□□□□ -0.23
ATG4B-207ENST00000415107 STXBP2Q15833 593 aa13.64□□□□□ -0.23
ATG4B-207ENST00000415107 UBE2SQ16763 222 aa13.64□□□□□ -0.23
ATG4B-207ENST00000415107 TRPV1Q8NER1 839 aa13.64□□□□□ -0.23
ATG4B-207ENST00000415107 INPP4AQ96PE3 977 aaPredicted RBP13.64□□□□□ -0.23
ATG4B-207ENST00000415107 PCDHA6Q9UN73 950 aa13.64□□□□□ -0.23
ATG4B-207ENST00000415107 PCDHA8Q9Y5H6 950 aa13.64□□□□□ -0.23
ATG4B-207ENST00000415107 KIAA1217Q5T5P2 1943 aa13.64□□□□□ -0.23
ATG4B-207ENST00000415107 FRMPD3Q5JV73 1810 aa13.64□□□□□ -0.23
ATG4B-207ENST00000415107 GJB1P08034 283 aa13.63□□□□□ -0.23
ATG4B-207ENST00000415107 TGFB3P10600 412 aa13.63□□□□□ -0.23
ATG4B-207ENST00000415107 PDIA4P13667 645 aaKnown RBP13.63□□□□□ -0.23
ATG4B-207ENST00000415107 EIF2AK2P19525 551 aaKnown RBP13.63□□□□□ -0.23
ATG4B-207ENST00000415107 CCND2P30279 289 aa13.63□□□□□ -0.23
ATG4B-207ENST00000415107 ICAM3P32942 547 aa13.63□□□□□ -0.23
ATG4B-207ENST00000415107 KRT40Q6A162 431 aa13.63□□□□□ -0.23
ATG4B-207ENST00000415107 TAPT1Q6NXT6 567 aa13.63□□□□□ -0.23
ATG4B-207ENST00000415107 MOXD1Q6UVY6 613 aa13.63□□□□□ -0.23
ATG4B-207ENST00000415107 FCHSD1Q86WN1 690 aa13.63□□□□□ -0.23
ATG4B-207ENST00000415107 FAM184AQ8NB25 1140 aa13.63□□□□□ -0.23
ATG4B-207ENST00000415107 TNFRSF25Q93038 417 aa13.63□□□□□ -0.23
ATG4B-207ENST00000415107 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.63□□□□□ -0.232e-7■■■□□ 19.1
ATG4B-207ENST00000415107 BRMS1Q9HCU9 246 aa13.63□□□□□ -0.23
ATG4B-207ENST00000415107 SMC3Q9UQE7 1217 aa13.63□□□□□ -0.23
ATG4B-207ENST00000415107 Q9Y3F1 56 aa13.63□□□□□ -0.23
ATG4B-207ENST00000415107 NKRFO15226 690 aaKnown RBP eCLIP13.62□□□□□ -0.23
ATG4B-207ENST00000415107 MAFGO15525 162 aa13.62□□□□□ -0.23
ATG4B-207ENST00000415107 CCL5P13501 91 aa13.62□□□□□ -0.23
ATG4B-207ENST00000415107 GJB2P29033 226 aa13.62□□□□□ -0.23
ATG4B-207ENST00000415107 CIITAP33076 1130 aa13.62□□□□□ -0.23
ATG4B-207ENST00000415107 KRT2P35908 639 aa13.62□□□□□ -0.23
ATG4B-207ENST00000415107 USP11P51784 963 aa13.62□□□□□ -0.23
ATG4B-207ENST00000415107 MRPS9P82933 396 aaKnown RBP13.62□□□□□ -0.23
ATG4B-207ENST00000415107 TRIM29Q14134 588 aa13.62□□□□□ -0.23
ATG4B-207ENST00000415107 MTFR1Q15390 333 aa13.62□□□□□ -0.23
ATG4B-207ENST00000415107 GNPTABQ3T906 1256 aa13.62□□□□□ -0.23
ATG4B-207ENST00000415107 IQSEC1Q6DN90 963 aa13.62□□□□□ -0.23
ATG4B-207ENST00000415107 KCNV1Q6PIU1 500 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms