RNA–Protein interactions for RNA: ENST00000414906.5

ZNF490-202, Transcript of zinc finger protein 490, humanhuman

TSL 3

Gene ZNF490, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF490-202ENST00000414906 MMP1P03956 469 aa12.42□□□□□ -0.42
ZNF490-202ENST00000414906 PDCP20941 246 aa12.42□□□□□ -0.42
ZNF490-202ENST00000414906 HOXA13P31271 388 aaPredicted RBP12.42□□□□□ -0.42
ZNF490-202ENST00000414906 CLK2P49760 499 aaKnown RBP12.42□□□□□ -0.42
ZNF490-202ENST00000414906 FOSBP53539 338 aa12.42□□□□□ -0.42
ZNF490-202ENST00000414906 USP17L6PQ6QN14 398 aa12.42□□□□□ -0.42
ZNF490-202ENST00000414906 SYTL5Q8TDW5 730 aaPredicted RBP12.42□□□□□ -0.42
ZNF490-202ENST00000414906 USP6NLQ92738 828 aa12.42□□□□□ -0.42
ZNF490-202ENST00000414906 NUDT12Q9BQG2 462 aa12.42□□□□□ -0.42
ZNF490-202ENST00000414906 PRDM6Q9NQX0 595 aa12.42□□□□□ -0.42
ZNF490-202ENST00000414906 SMCHD1A6NHR9 2005 aa12.42□□□□□ -0.42
ZNF490-202ENST00000414906 POTEB2H3BUK9 544 aa12.41□□□□□ -0.42
ZNF490-202ENST00000414906 M0R2N6 131 aa12.41□□□□□ -0.42
ZNF490-202ENST00000414906 COBLO75128 1261 aa12.41□□□□□ -0.42
ZNF490-202ENST00000414906 PGK2P07205 417 aa12.41□□□□□ -0.42
ZNF490-202ENST00000414906 HOXC6P09630 235 aa12.41□□□□□ -0.42
ZNF490-202ENST00000414906 HOXD10P28358 340 aa12.41□□□□□ -0.42
ZNF490-202ENST00000414906 GUCY1B3Q02153 619 aa12.41□□□□□ -0.42
ZNF490-202ENST00000414906 MAP2K5Q13163 448 aa12.41□□□□□ -0.42
ZNF490-202ENST00000414906 UBE2SQ16763 222 aa12.41□□□□□ -0.42
ZNF490-202ENST00000414906 ZNF792Q3KQV3 632 aa12.41□□□□□ -0.42
ZNF490-202ENST00000414906 MCTP2Q6DN12 878 aa12.41□□□□□ -0.42
ZNF490-202ENST00000414906 BLIDQ8IZY5 108 aa12.41□□□□□ -0.42
ZNF490-202ENST00000414906 REXO1Q8N1G1 1221 aaKnown RBP12.41□□□□□ -0.42
ZNF490-202ENST00000414906 FAM133AQ8N9E0 248 aa12.41□□□□□ -0.42
ZNF490-202ENST00000414906 BRMS1Q9HCU9 246 aa12.41□□□□□ -0.42
ZNF490-202ENST00000414906 SLC5A4Q9NY91 659 aa12.41□□□□□ -0.42
ZNF490-202ENST00000414906 COL20A1Q9P218 1284 aa12.41□□□□□ -0.42
ZNF490-202ENST00000414906 DAXXQ9UER7 740 aaPredicted RBP12.41□□□□□ -0.42
ZNF490-202ENST00000414906 DIS3Q9Y2L1 958 aaKnown RBP12.41□□□□□ -0.42
ZNF490-202ENST00000414906 ZNF236Q9UL36 1845 aa12.41□□□□□ -0.42
ZNF490-202ENST00000414906 MUC3AQ02505 3323 aa12.4□□□□□ -0.42
ZNF490-202ENST00000414906 H3BQV1 296 aa12.4□□□□□ -0.42
ZNF490-202ENST00000414906 ADAMTS3O15072 1205 aa12.4□□□□□ -0.42
ZNF490-202ENST00000414906 FOSP01100 380 aaPredicted RBP12.4□□□□□ -0.42
ZNF490-202ENST00000414906 PDIA4P13667 645 aaKnown RBP12.4□□□□□ -0.42
ZNF490-202ENST00000414906 SYT1P21579 422 aa12.4□□□□□ -0.42
ZNF490-202ENST00000414906 KRT2P35908 639 aa12.4□□□□□ -0.42
ZNF490-202ENST00000414906 RGS2P41220 211 aa12.4□□□□□ -0.42
ZNF490-202ENST00000414906 CNTN2Q02246 1040 aa12.4□□□□□ -0.42
ZNF490-202ENST00000414906 PRKCZQ05513 592 aa12.4□□□□□ -0.42
ZNF490-202ENST00000414906 AP3B2Q13367 1082 aa12.4□□□□□ -0.42
ZNF490-202ENST00000414906 SAFBQ15424 915 aaKnown RBP eCLIP12.4□□□□□ -0.42
ZNF490-202ENST00000414906 DPP9Q86TI2 863 aa12.4□□□□□ -0.42
ZNF490-202ENST00000414906 FCHSD1Q86WN1 690 aa12.4□□□□□ -0.42
ZNF490-202ENST00000414906 DIS3L2Q8IYB7 885 aaKnown RBP12.4□□□□□ -0.42
ZNF490-202ENST00000414906 DNERQ8NFT8 737 aa12.4□□□□□ -0.42
ZNF490-202ENST00000414906 OXER1Q8TDS5 423 aa12.4□□□□□ -0.42
ZNF490-202ENST00000414906 ZNF333Q96JL9 665 aa12.4□□□□□ -0.42
ZNF490-202ENST00000414906 PURBQ96QR8 312 aaKnown RBP12.4□□□□□ -0.42
ZNF490-202ENST00000414906 TAAR1Q96RJ0 339 aa12.4□□□□□ -0.42
ZNF490-202ENST00000414906 BIN2Q9UBW5 565 aaPredicted RBP12.4□□□□□ -0.42
ZNF490-202ENST00000414906 SRRDQ9UH36 339 aa12.4□□□□□ -0.42
ZNF490-202ENST00000414906 PCDHA6Q9UN73 950 aa12.4□□□□□ -0.42
ZNF490-202ENST00000414906 PCDHA8Q9Y5H6 950 aa12.4□□□□□ -0.42
ZNF490-202ENST00000414906 PLXNB2O15031 1838 aa12.39□□□□□ -0.43
ZNF490-202ENST00000414906 LOC102724159A0A0B4J2E5 919 aa12.39□□□□□ -0.43
ZNF490-202ENST00000414906 SOWAHBA6NEL2 793 aa12.39□□□□□ -0.43
ZNF490-202ENST00000414906 SPDYE3A6NKU9 549 aa12.39□□□□□ -0.43
ZNF490-202ENST00000414906 BTBD18B2RXH4 712 aa12.39□□□□□ -0.43
ZNF490-202ENST00000414906 XRCC5P13010 732 aaKnown RBP12.39□□□□□ -0.43
ZNF490-202ENST00000414906 FLT3LGP49771 235 aa12.39□□□□□ -0.43
ZNF490-202ENST00000414906 PRMT2P55345 433 aa12.39□□□□□ -0.43
ZNF490-202ENST00000414906 PWP2Q15269 919 aaKnown RBP12.39□□□□□ -0.43
ZNF490-202ENST00000414906 JAKMIP3Q5VZ66 844 aa12.39□□□□□ -0.43
ZNF490-202ENST00000414906 ZNF467Q7Z7K2 595 aaPredicted RBP12.39□□□□□ -0.43
ZNF490-202ENST00000414906 NSUN6Q8TEA1 469 aaKnown RBP12.39□□□□□ -0.43
ZNF490-202ENST00000414906 TNFRSF25Q93038 417 aa12.39□□□□□ -0.43
ZNF490-202ENST00000414906 FGD4Q96M96 766 aa12.39□□□□□ -0.43
ZNF490-202ENST00000414906 RMDN3Q96TC7 470 aa12.39□□□□□ -0.43
ZNF490-202ENST00000414906 APBA2Q99767 749 aa12.39□□□□□ -0.43
ZNF490-202ENST00000414906 FOXP1Q9H334 677 aaPredicted RBP12.39□□□□□ -0.43
ZNF490-202ENST00000414906 TMEM260Q9NX78 707 aa12.39□□□□□ -0.43
ZNF490-202ENST00000414906 ADD3Q9UEY8 706 aaKnown RBP12.39□□□□□ -0.43
ZNF490-202ENST00000414906 GABRQQ9UN88 632 aa12.39□□□□□ -0.43
ZNF490-202ENST00000414906 MGAMO43451 1857 aa12.39□□□□□ -0.43
ZNF490-202ENST00000414906 ZSWIM8A7E2V4 1837 aa12.39□□□□□ -0.43
ZNF490-202ENST00000414906 ASTN1O14525 1302 aa12.38□□□□□ -0.43
ZNF490-202ENST00000414906 FRMPD4Q14CM0 1322 aa12.38□□□□□ -0.43
ZNF490-202ENST00000414906 RPTORQ8N122 1335 aa12.38□□□□□ -0.43
ZNF490-202ENST00000414906 STX6O43752 255 aa12.38□□□□□ -0.43
ZNF490-202ENST00000414906 CYP2B6P20813 491 aa12.38□□□□□ -0.43
ZNF490-202ENST00000414906 U2AF2P26368 475 aaKnown RBP eCLIP12.38□□□□□ -0.43
ZNF490-202ENST00000414906 ALDH5A1P51649 535 aaPredicted RBP12.38□□□□□ -0.43
ZNF490-202ENST00000414906 NR5A1Q13285 461 aa12.38□□□□□ -0.43
ZNF490-202ENST00000414906 IRF5Q13568 498 aa12.38□□□□□ -0.43
ZNF490-202ENST00000414906 ARHGEF16Q5VV41 709 aa12.38□□□□□ -0.43
ZNF490-202ENST00000414906 KRT25Q7Z3Z0 450 aa12.38□□□□□ -0.43
ZNF490-202ENST00000414906 MSL3Q8N5Y2 521 aaKnown RBP12.38□□□□□ -0.43
ZNF490-202ENST00000414906 NPLOC4Q8TAT6 608 aa12.38□□□□□ -0.43
ZNF490-202ENST00000414906 RASGRP4Q8TDF6 673 aa12.38□□□□□ -0.43
ZNF490-202ENST00000414906 MAML3Q96JK9 1138 aa12.38□□□□□ -0.43
ZNF490-202ENST00000414906 IPO9Q96P70 1041 aaKnown RBP12.38□□□□□ -0.43
ZNF490-202ENST00000414906 IWS1Q96ST2 819 aa12.38□□□□□ -0.43
ZNF490-202ENST00000414906 ANO3Q9BYT9 981 aa12.38□□□□□ -0.43
ZNF490-202ENST00000414906 EHMT1Q9H9B1 1298 aa12.38□□□□□ -0.43
ZNF490-202ENST00000414906 PXMP2Q9NR77 195 aa12.38□□□□□ -0.43
ZNF490-202ENST00000414906 EYSQ5T1H1 3165 aa12.37□□□□□ -0.43
ZNF490-202ENST00000414906 VPS37CA5D8V6 355 aaPredicted RBP12.37□□□□□ -0.43
ZNF490-202ENST00000414906 B4DLN1 442 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms