RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 NME9Q86XW9 330 aa4.55□□□□□ -1.68
LINC01048-201ENST00000414480 RPUSD2Q8IZ73 545 aaKnown RBP4.55□□□□□ -1.68
LINC01048-201ENST00000414480 CNTROBQ8N137 903 aa4.55□□□□□ -1.68
LINC01048-201ENST00000414480 CLASRPQ8N2M8 674 aaKnown RBP4.55□□□□□ -1.68
LINC01048-201ENST00000414480 SVIPQ8NHG7 77 aa4.55□□□□□ -1.68
LINC01048-201ENST00000414480 ATP6V1E2Q96A05 226 aa4.55□□□□□ -1.68
LINC01048-201ENST00000414480 PLD4Q96BZ4 506 aa4.55□□□□□ -1.68
LINC01048-201ENST00000414480 MRFAP1L1Q96HT8 127 aa4.55□□□□□ -1.68
LINC01048-201ENST00000414480 C8orf48Q96LL4 319 aa4.55□□□□□ -1.68
LINC01048-201ENST00000414480 LZTS2Q9BRK4 669 aa4.55□□□□□ -1.68
LINC01048-201ENST00000414480 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.55□□□□□ -1.68
LINC01048-201ENST00000414480 DNAI2Q9GZS0 605 aa4.55□□□□□ -1.68
LINC01048-201ENST00000414480 OSBPL2Q9H1P3 480 aa4.55□□□□□ -1.68
LINC01048-201ENST00000414480 SLKQ9H2G2 1235 aaPredicted RBP4.55□□□□□ -1.68
LINC01048-201ENST00000414480 DIAPH3Q9NSV4 1193 aa4.55□□□□□ -1.68
LINC01048-201ENST00000414480 IRAK4Q9NWZ3 460 aa4.55□□□□□ -1.68
LINC01048-201ENST00000414480 TMOD4Q9NZQ9 345 aa4.55□□□□□ -1.68
LINC01048-201ENST00000414480 C6orf203Q9P0P8 240 aaPredicted RBP4.55□□□□□ -1.68
LINC01048-201ENST00000414480 KIF3AQ9Y496 699 aa4.55□□□□□ -1.68
LINC01048-201ENST00000414480 LTN1O94822 1766 aa4.55□□□□□ -1.68
LINC01048-201ENST00000414480 CD163L1Q9NR16 1453 aa4.55□□□□□ -1.68
LINC01048-201ENST00000414480 INSRP06213 1382 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 CGNL1Q0VF96 1302 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 MAP3K19Q56UN5 1328 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 A0A0C4DFX4 3053 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 SMTNL1A8MU46 457 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 CA12O43570 354 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 RPS6KA4O75676 772 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 SASH3O75995 380 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 RPN1P04843 607 aaKnown RBP4.54□□□□□ -1.68
LINC01048-201ENST00000414480 FAM163BP0C2L3 166 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 OAS2P29728 719 aaKnown RBP4.54□□□□□ -1.68
LINC01048-201ENST00000414480 CASP2P42575 452 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 SEC13P55735 322 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 GEMIN4P57678 1058 aaKnown RBP4.54□□□□□ -1.68
LINC01048-201ENST00000414480 TRDNQ13061 729 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 GNL2Q13823 731 aaKnown RBP4.54□□□□□ -1.68
LINC01048-201ENST00000414480 FILIP1LQ4L180 1135 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 GDF6Q6KF10 455 aaPredicted RBP4.54□□□□□ -1.68
LINC01048-201ENST00000414480 KSR2Q6VAB6 950 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 HFE2Q6ZVN8 426 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 BTN2A1Q7KYR7 527 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.54□□□□□ -1.68
LINC01048-201ENST00000414480 ZDHHC13Q8IUH4 622 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 AGGF1Q8N302 714 aaeCLIP4.54□□□□□ -1.68
LINC01048-201ENST00000414480 IL22RA1Q8N6P7 574 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 ARL6IP6Q8N6S5 226 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 MYRIPQ8NFW9 859 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 TDRD7Q8NHU6 1098 aaKnown RBP4.54□□□□□ -1.68
LINC01048-201ENST00000414480 STAG1Q8WVM7 1258 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 USP6NLQ92738 828 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 ZBTB9Q96C00 473 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 LTV1Q96GA3 475 aaPredicted RBP4.54□□□□□ -1.68
LINC01048-201ENST00000414480 UCN2Q96RP3 112 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 NOL10Q9BSC4 688 aaKnown RBP4.54□□□□□ -1.68
LINC01048-201ENST00000414480 RBSNQ9H1K0 784 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 TSPY26PQ9H489 355 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 MED4Q9NPJ6 270 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 DDX21Q9NR30 783 aaKnown RBP eCLIP4.54□□□□□ -1.68
LINC01048-201ENST00000414480 ATG3Q9NT62 314 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 EXOC1Q9NV70 894 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 COMMD8Q9NX08 183 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 TRMT1Q9NXH9 659 aaKnown RBP4.54□□□□□ -1.68
LINC01048-201ENST00000414480 TLR7Q9NYK1 1049 aaKnown RBP4.54□□□□□ -1.68
LINC01048-201ENST00000414480 ABT1Q9ULW3 272 aaKnown RBP4.54□□□□□ -1.68
LINC01048-201ENST00000414480 SLC45A1Q9Y2W3 748 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 RTCBQ9Y3I0 505 aaKnown RBP4.54□□□□□ -1.68
LINC01048-201ENST00000414480 PRKAB1Q9Y478 270 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 MKI67P46013 3256 aaKnown RBP4.54□□□□□ -1.68
LINC01048-201ENST00000414480 CCDC88AQ3V6T2 1871 aa4.54□□□□□ -1.68
LINC01048-201ENST00000414480 ITGB4P16144 1822 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 CNTNAP4Q9C0A0 1308 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 USP42Q9H9J4 1324 aaKnown RBP4.53□□□□□ -1.68
LINC01048-201ENST00000414480 LTBP3Q9NS15 1303 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 DICER1Q9UPY3 1922 aaKnown RBP4.53□□□□□ -1.68
LINC01048-201ENST00000414480 CCDC196A0A1B0GTZ2 297 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 A0A1W2PRQ8 180 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 IQCA1LA6NCM1 817 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 H0Y3Z8 333 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 PPFIA2O75334 1257 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 GHRHP01286 108 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 MYL1P05976 194 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 COL6A1P12109 1028 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 SKILP12757 684 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 RASA1P20936 1047 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 IGFBP4P22692 258 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 HOXC9P31274 260 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 GNALP38405 381 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 ECE1P42892 770 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 MAGEA8P43361 318 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 CCDC15Q0P6D6 951 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 NFIAQ12857 509 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 PRPF4BQ13523 1007 aaKnown RBP4.53□□□□□ -1.68
LINC01048-201ENST00000414480 RASA3Q14644 834 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 GRAMD1BQ3KR37 738 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 AMOTQ4VCS5 1084 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 COBLL1Q53SF7 1204 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 NOM1Q5C9Z4 860 aaKnown RBP4.53□□□□□ -1.68
LINC01048-201ENST00000414480 JAKMIP3Q5VZ66 844 aa4.53□□□□□ -1.68
LINC01048-201ENST00000414480 ALKBH2Q6NS38 261 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms