RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 ZNF865P0CJ78 1059 aaPredicted RBP18.94■□□□□ 0.62
LINC00398-201ENST00000414407 ACVR2BQ13705 512 aa18.94■□□□□ 0.62
LINC00398-201ENST00000414407 ARHGEF16Q5VV41 709 aa18.94■□□□□ 0.62
LINC00398-201ENST00000414407 TRPV1Q8NER1 839 aa18.94■□□□□ 0.62
LINC00398-201ENST00000414407 CCDC148Q8NFR7 591 aa18.94■□□□□ 0.62
LINC00398-201ENST00000414407 WASF1Q92558 559 aa18.94■□□□□ 0.62
LINC00398-201ENST00000414407 LLPHQ9BRT6 129 aaKnown RBP18.94■□□□□ 0.62
LINC00398-201ENST00000414407 KATNBL1Q9H079 304 aa18.94■□□□□ 0.62
LINC00398-201ENST00000414407 ZMYND12Q9H0C1 365 aa18.94■□□□□ 0.62
LINC00398-201ENST00000414407 PXMP2Q9NR77 195 aa18.94■□□□□ 0.62
LINC00398-201ENST00000414407 SMCO2A6NFE2 343 aa18.93■□□□□ 0.62
LINC00398-201ENST00000414407 CCND3P30281 292 aaPredicted RBP18.93■□□□□ 0.62
LINC00398-201ENST00000414407 ADCY7P51828 1080 aa18.93■□□□□ 0.62
LINC00398-201ENST00000414407 PDE4DQ08499 809 aa18.93■□□□□ 0.62
LINC00398-201ENST00000414407 USP17L6PQ6QN14 398 aa18.93■□□□□ 0.62
LINC00398-201ENST00000414407 VTA1Q9NP79 307 aa18.93■□□□□ 0.62
LINC00398-201ENST00000414407 FRMPD4Q14CM0 1322 aa18.93■□□□□ 0.62
LINC00398-201ENST00000414407 PPFIA3O75145 1194 aa18.92■□□□□ 0.62
LINC00398-201ENST00000414407 SGPL1O95470 568 aa18.92■□□□□ 0.62
LINC00398-201ENST00000414407 MYCP01106 439 aaPredicted RBP18.92■□□□□ 0.62
LINC00398-201ENST00000414407 GNA11P29992 359 aa18.92■□□□□ 0.62
LINC00398-201ENST00000414407 GJA8P48165 433 aa18.92■□□□□ 0.62
LINC00398-201ENST00000414407 ST3GAL1Q11201 340 aa18.92■□□□□ 0.62
LINC00398-201ENST00000414407 PRAMEF19Q5SWL8 479 aa18.92■□□□□ 0.62
LINC00398-201ENST00000414407 MCTP2Q6DN12 878 aa18.92■□□□□ 0.62
LINC00398-201ENST00000414407 FCHSD1Q86WN1 690 aa18.92■□□□□ 0.62
LINC00398-201ENST00000414407 NSUN7Q8NE18 718 aaKnown RBP18.92■□□□□ 0.62
LINC00398-201ENST00000414407 PDCD2LQ9BRP1 358 aa18.92■□□□□ 0.62
LINC00398-201ENST00000414407 C6orf50Q9HD87 102 aa18.92■□□□□ 0.62
LINC00398-201ENST00000414407 ORC3Q9UBD5 711 aaPredicted RBP18.92■□□□□ 0.62
LINC00398-201ENST00000414407 DDX20Q9UHI6 824 aaKnown RBP18.92■□□□□ 0.62
LINC00398-201ENST00000414407 FAM184BQ9ULE4 1060 aa18.92■□□□□ 0.62
LINC00398-201ENST00000414407 FOSP01100 380 aaPredicted RBP18.91■□□□□ 0.62
LINC00398-201ENST00000414407 NR3C2P08235 984 aa18.91■□□□□ 0.62
LINC00398-201ENST00000414407 AKR1A1P14550 325 aa18.91■□□□□ 0.62
LINC00398-201ENST00000414407 EIF2AK2P19525 551 aaKnown RBP18.91■□□□□ 0.62
LINC00398-201ENST00000414407 CNGA1P29973 690 aa18.91■□□□□ 0.62
LINC00398-201ENST00000414407 STXBP2Q15833 593 aa18.91■□□□□ 0.62
LINC00398-201ENST00000414407 LHX8Q68G74 356 aa18.91■□□□□ 0.62
LINC00398-201ENST00000414407 CCDC83Q8IWF9 413 aa18.91■□□□□ 0.62
LINC00398-201ENST00000414407 BICD2Q8TD16 824 aa18.91■□□□□ 0.62
LINC00398-201ENST00000414407 U2AF1L4Q8WU68 220 aaKnown RBP18.91■□□□□ 0.62
LINC00398-201ENST00000414407 DEFB118Q96PH6 123 aa18.91■□□□□ 0.62
LINC00398-201ENST00000414407 CRISPLD2Q9H0B8 497 aa18.91■□□□□ 0.62
LINC00398-201ENST00000414407 ZHX1Q9UKY1 873 aaPredicted RBP18.91■□□□□ 0.62
LINC00398-201ENST00000414407 SPDYE3A6NKU9 549 aa18.9■□□□□ 0.62
LINC00398-201ENST00000414407 EIF3JO75822 258 aaKnown RBP18.9■□□□□ 0.62
LINC00398-201ENST00000414407 CD2BP2O95400 341 aaKnown RBP18.9■□□□□ 0.62
LINC00398-201ENST00000414407 FDPSP14324 419 aaKnown RBP18.9■□□□□ 0.62
LINC00398-201ENST00000414407 XBP1P17861 261 aa18.9■□□□□ 0.62
LINC00398-201ENST00000414407 CLK2P49760 499 aaKnown RBP18.9■□□□□ 0.62
LINC00398-201ENST00000414407 AP3B2Q13367 1082 aa18.9■□□□□ 0.62
LINC00398-201ENST00000414407 PGM5Q15124 567 aa18.9■□□□□ 0.62
LINC00398-201ENST00000414407 GALNT17Q6IS24 598 aa18.9■□□□□ 0.62
LINC00398-201ENST00000414407 XRRA1Q6P2D8 792 aa18.9■□□□□ 0.62
LINC00398-201ENST00000414407 VSIG10LQ86VR7 867 aa18.9■□□□□ 0.62
LINC00398-201ENST00000414407 TMX3Q96JJ7 454 aa18.9■□□□□ 0.62
LINC00398-201ENST00000414407 VPS54Q9P1Q0 977 aa18.9■□□□□ 0.62
LINC00398-201ENST00000414407 RBM47A0AV96 593 aaKnown RBP18.89■□□□□ 0.61
LINC00398-201ENST00000414407 STAM2O75886 525 aa18.89■□□□□ 0.61
LINC00398-201ENST00000414407 HMGN5P82970 282 aaKnown RBP18.89■□□□□ 0.61
LINC00398-201ENST00000414407 UBE2SQ16763 222 aa18.89■□□□□ 0.61
LINC00398-201ENST00000414407 CCDC144BQ3MJ40 725 aa18.89■□□□□ 0.61
LINC00398-201ENST00000414407 IFFO2Q5TF58 517 aa18.89■□□□□ 0.61
LINC00398-201ENST00000414407 IQSEC1Q6DN90 963 aa18.89■□□□□ 0.61
LINC00398-201ENST00000414407 TAPT1Q6NXT6 567 aa18.89■□□□□ 0.61
LINC00398-201ENST00000414407 EHMT1Q9H9B1 1298 aa18.89■□□□□ 0.61
LINC00398-201ENST00000414407 OGDHLQ9ULD0 1010 aa18.89■□□□□ 0.61
LINC00398-201ENST00000414407 PCDHA6Q9UN73 950 aa18.89■□□□□ 0.61
LINC00398-201ENST00000414407 PCDHA8Q9Y5H6 950 aa18.89■□□□□ 0.61
LINC00398-201ENST00000414407 CCND2P30279 289 aa18.88■□□□□ 0.61
LINC00398-201ENST00000414407 NLRP5P59047 1200 aa18.88■□□□□ 0.61
LINC00398-201ENST00000414407 FBXO16Q8IX29 292 aaPredicted RBP18.88■□□□□ 0.61
LINC00398-201ENST00000414407 DAGLBQ8NCG7 672 aa18.88■□□□□ 0.61
LINC00398-201ENST00000414407 SHISA4Q96DD7 197 aa18.88■□□□□ 0.61
LINC00398-201ENST00000414407 DDX49Q9Y6V7 483 aaKnown RBP18.88■□□□□ 0.61
LINC00398-201ENST00000414407 POTEFA5A3E0 1075 aa18.87■□□□□ 0.61
LINC00398-201ENST00000414407 MCM3APO60318 1980 aa18.87■□□□□ 0.61
LINC00398-201ENST00000414407 JAK2O60674 1132 aa18.87■□□□□ 0.61
LINC00398-201ENST00000414407 DUSP11O75319 330 aaKnown RBP18.87■□□□□ 0.61
LINC00398-201ENST00000414407 RARBP10826 455 aa18.87■□□□□ 0.61
LINC00398-201ENST00000414407 PCNX4Q63HM2 1172 aa18.87■□□□□ 0.61
LINC00398-201ENST00000414407 EEPD1Q7L9B9 569 aa18.87■□□□□ 0.61
LINC00398-201ENST00000414407 REXO1Q8N1G1 1221 aaKnown RBP18.87■□□□□ 0.61
LINC00398-201ENST00000414407 ANKLE1Q8NAG6 615 aa18.87■□□□□ 0.61
LINC00398-201ENST00000414407 SCFD2Q8WU76 684 aa18.87■□□□□ 0.61
LINC00398-201ENST00000414407 AIFM3Q96NN9 605 aa18.87■□□□□ 0.61
LINC00398-201ENST00000414407 ALG1Q9BT22 464 aa18.87■□□□□ 0.61
LINC00398-201ENST00000414407 PHF20Q9BVI0 1012 aa18.87■□□□□ 0.61
LINC00398-201ENST00000414407 PCDHA4Q9UN74 947 aa18.87■□□□□ 0.61
LINC00398-201ENST00000414407 Q9Y3F1 56 aa18.87■□□□□ 0.61
LINC00398-201ENST00000414407 LRRC37A2A6NM11 1700 aa18.86■□□□□ 0.61
LINC00398-201ENST00000414407 TFRCP02786 760 aaKnown RBP18.86■□□□□ 0.61
LINC00398-201ENST00000414407 MYCLP12524 364 aaPredicted RBP18.86■□□□□ 0.61
LINC00398-201ENST00000414407 TNFAIP2Q03169 654 aa18.86■□□□□ 0.61
LINC00398-201ENST00000414407 IL31RAQ8NI17 732 aa18.86■□□□□ 0.61
LINC00398-201ENST00000414407 PDGFCQ9NRA1 345 aa18.86■□□□□ 0.61
LINC00398-201ENST00000414407 NKRFO15226 690 aaKnown RBP eCLIP18.85■□□□□ 0.61
LINC00398-201ENST00000414407 EN2P19622 333 aaPredicted RBP18.85■□□□□ 0.61
LINC00398-201ENST00000414407 ADCYAP1R1P41586 468 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms