RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 CHD1LQ86WJ1 897 aa28.57■■■□□ 2.16
AC005540.1-201ENST00000413911 RGS22Q8NE09 1264 aa28.57■■■□□ 2.16
AC005540.1-201ENST00000413911 OSBPL3Q9H4L5 887 aa28.57■■■□□ 2.16
AC005540.1-201ENST00000413911 SLC28A3Q9HAS3 691 aa28.57■■■□□ 2.16
AC005540.1-201ENST00000413911 COL20A1Q9P218 1284 aa28.57■■■□□ 2.16
AC005540.1-201ENST00000413911 NKRFO15226 690 aaKnown RBP eCLIP28.56■■■□□ 2.16
AC005540.1-201ENST00000413911 TXNP10599 105 aaKnown RBP28.56■■■□□ 2.16
AC005540.1-201ENST00000413911 LAMA4Q16363 1823 aa28.56■■■□□ 2.16
AC005540.1-201ENST00000413911 CDC37Q16543 378 aaPredicted RBP28.56■■■□□ 2.16
AC005540.1-201ENST00000413911 FAM47CQ5HY64 1035 aa28.56■■■□□ 2.16
AC005540.1-201ENST00000413911 CWC27Q6UX04 472 aaKnown RBP28.56■■■□□ 2.16
AC005540.1-201ENST00000413911 DEFB128Q7Z7B8 93 aa28.56■■■□□ 2.16
AC005540.1-201ENST00000413911 PNMA1Q8ND90 353 aa28.56■■■□□ 2.16
AC005540.1-201ENST00000413911 GPHNQ9NQX3 736 aaPredicted RBP28.56■■■□□ 2.16
AC005540.1-201ENST00000413911 ZBBXA8MT70 800 aa28.55■■■□□ 2.16
AC005540.1-201ENST00000413911 B4E1Z4 1266 aa28.55■■■□□ 2.16
AC005540.1-201ENST00000413911 MFAP1P55081 439 aaKnown RBP28.55■■■□□ 2.16
AC005540.1-201ENST00000413911 CCDC85BQ15834 202 aaPredicted RBP28.55■■■□□ 2.16
AC005540.1-201ENST00000413911 CCDC62Q6P9F0 684 aa28.55■■■□□ 2.16
AC005540.1-201ENST00000413911 ADGRF4Q8IZF3 695 aa28.55■■■□□ 2.16
AC005540.1-201ENST00000413911 ANKS1AQ92625 1134 aa28.55■■■□□ 2.16
AC005540.1-201ENST00000413911 SYMPKQ92797 1274 aaKnown RBP28.55■■■□□ 2.16
AC005540.1-201ENST00000413911 TAAR1Q96RJ0 339 aa28.55■■■□□ 2.16
AC005540.1-201ENST00000413911 IGFBP4P22692 258 aa28.54■■■□□ 2.16
AC005540.1-201ENST00000413911 NUCB1Q02818 461 aa28.54■■■□□ 2.16
AC005540.1-201ENST00000413911 SYTL5Q8TDW5 730 aaPredicted RBP28.54■■■□□ 2.16
AC005540.1-201ENST00000413911 RWDD1Q9H446 243 aaPredicted RBP28.54■■■□□ 2.16
AC005540.1-201ENST00000413911 ATP2A2P16615 1042 aaKnown RBP28.53■■■□□ 2.16
AC005540.1-201ENST00000413911 NFRKBQ6P4R8 1299 aa28.53■■■□□ 2.16
AC005540.1-201ENST00000413911 ENAHQ8N8S7 591 aaPredicted RBP28.53■■■□□ 2.16
AC005540.1-201ENST00000413911 MPHOSPH6Q99547 160 aaKnown RBP28.53■■■□□ 2.16
AC005540.1-201ENST00000413911 ZSWIM5Q9P217 1185 aa28.53■■■□□ 2.16
AC005540.1-201ENST00000413911 PCDHA11Q9Y5I1 949 aa28.53■■■□□ 2.16
AC005540.1-201ENST00000413911 XIRP2A4UGR9 3374 aa28.53■■■□□ 2.16
AC005540.1-201ENST00000413911 TRANK1O15050 2925 aa28.53■■■□□ 2.16
AC005540.1-201ENST00000413911 BRDTQ58F21 947 aaPredicted RBP28.52■■■□□ 2.16
AC005540.1-201ENST00000413911 CTAGE1Q96RT6 745 aa28.52■■■□□ 2.16
AC005540.1-201ENST00000413911 ZSCAN10Q96SZ4 725 aaPredicted RBP28.52■■■□□ 2.16
AC005540.1-201ENST00000413911 KAT14Q9H8E8 782 aa28.52■■■□□ 2.16
AC005540.1-201ENST00000413911 RAD50Q92878 1312 aa28.51■■■□□ 2.15
AC005540.1-201ENST00000413911 RBAK-RBAKDNI3L0D1 243 aa28.51■■■□□ 2.15
AC005540.1-201ENST00000413911 KPNA6O60684 536 aa28.51■■■□□ 2.15
AC005540.1-201ENST00000413911 PFKMP08237 780 aa28.51■■■□□ 2.15
AC005540.1-201ENST00000413911 IQCF3P0C7M6 154 aa28.51■■■□□ 2.15
AC005540.1-201ENST00000413911 LY6KQ17RY6 165 aa28.51■■■□□ 2.15
AC005540.1-201ENST00000413911 QRICH1Q2TAL8 776 aa28.51■■■□□ 2.15
AC005540.1-201ENST00000413911 PPP2R2DQ66LE6 453 aa28.51■■■□□ 2.15
AC005540.1-201ENST00000413911 IQCA1Q86XH1 822 aa28.51■■■□□ 2.15
AC005540.1-201ENST00000413911 AFG1LQ8WV93 481 aa28.51■■■□□ 2.15
AC005540.1-201ENST00000413911 IL25Q9H293 177 aa28.51■■■□□ 2.15
AC005540.1-201ENST00000413911 DIAPH3Q9NSV4 1193 aa28.51■■■□□ 2.15
AC005540.1-201ENST00000413911 ABCB11O95342 1321 aa28.5■■■□□ 2.15
AC005540.1-201ENST00000413911 ARHGAP1Q07960 439 aa28.5■■■□□ 2.15
AC005540.1-201ENST00000413911 AAMPQ13685 434 aa28.5■■■□□ 2.15
AC005540.1-201ENST00000413911 SEPT14Q6ZU15 432 aa28.5■■■□□ 2.15
AC005540.1-201ENST00000413911 JMJD4Q9H9V9 463 aa28.5■■■□□ 2.15
AC005540.1-201ENST00000413911 PITPNM1O00562 1244 aa28.49■■■□□ 2.15
AC005540.1-201ENST00000413911 PTPN11Q06124 597 aaPredicted RBP28.49■■■□□ 2.15
AC005540.1-201ENST00000413911 ATXN2LQ8WWM7 1075 aaKnown RBP28.49■■■□□ 2.15
AC005540.1-201ENST00000413911 KAT2BQ92831 832 aa28.49■■■□□ 2.15
AC005540.1-201ENST00000413911 DSCC1Q9BVC3 393 aa28.49■■■□□ 2.15
AC005540.1-201ENST00000413911 VAT1LQ9HCJ6 419 aa28.49■■■□□ 2.15
AC005540.1-201ENST00000413911 THEGQ9P2T0 379 aa28.49■■■□□ 2.15
AC005540.1-201ENST00000413911 TET1Q8NFU7 2136 aa28.48■■■□□ 2.15
AC005540.1-201ENST00000413911 B4DLN1 442 aa28.48■■■□□ 2.15
AC005540.1-201ENST00000413911 MMP3P08254 477 aa28.48■■■□□ 2.15
AC005540.1-201ENST00000413911 MRPL12P52815 198 aaKnown RBP28.48■■■□□ 2.15
AC005540.1-201ENST00000413911 CHMP4BP1P59074 171 aa28.48■■■□□ 2.15
AC005540.1-201ENST00000413911 ASPRV1Q53RT3 343 aa28.48■■■□□ 2.15
AC005540.1-201ENST00000413911 CCDC178Q5BJE1 867 aa28.48■■■□□ 2.15
AC005540.1-201ENST00000413911 EXOC6Q8TAG9 804 aa28.48■■■□□ 2.15
AC005540.1-201ENST00000413911 NSUN6Q8TEA1 469 aaKnown RBP28.48■■■□□ 2.15
AC005540.1-201ENST00000413911 ASB2Q96Q27 587 aa28.48■■■□□ 2.15
AC005540.1-201ENST00000413911 TANC1Q9C0D5 1861 aa28.48■■■□□ 2.15
AC005540.1-201ENST00000413911 RFXAPO00287 272 aa28.47■■■□□ 2.15
AC005540.1-201ENST00000413911 OPLAHO14841 1288 aa28.47■■■□□ 2.15
AC005540.1-201ENST00000413911 ARHGEF15O94989 841 aa28.47■■■□□ 2.15
AC005540.1-201ENST00000413911 CA3P07451 260 aa28.47■■■□□ 2.15
AC005540.1-201ENST00000413911 RFC2P35250 354 aa28.47■■■□□ 2.15
AC005540.1-201ENST00000413911 NT5C2P49902 561 aa28.47■■■□□ 2.15
AC005540.1-201ENST00000413911 GPNMBQ14956 572 aa28.47■■■□□ 2.15
AC005540.1-201ENST00000413911 STAG2Q8N3U4 1231 aa28.47■■■□□ 2.15
AC005540.1-201ENST00000413911 RMDN3Q96TC7 470 aa28.47■■■□□ 2.15
AC005540.1-201ENST00000413911 GDF6Q6KF10 455 aaPredicted RBP28.46■■■□□ 2.15
AC005540.1-201ENST00000413911 CHST3Q7LGC8 479 aa28.46■■■□□ 2.15
AC005540.1-201ENST00000413911 FBXO11Q86XK2 927 aa28.46■■■□□ 2.15
AC005540.1-201ENST00000413911 RETREG2Q8NC44 543 aa28.46■■■□□ 2.15
AC005540.1-201ENST00000413911 MAF1Q9H063 256 aa28.46■■■□□ 2.15
AC005540.1-201ENST00000413911 EPOPA6NHQ4 379 aa28.45■■■□□ 2.14
AC005540.1-201ENST00000413911 GH1P01241 217 aa28.45■■■□□ 2.14
AC005540.1-201ENST00000413911 PARP1P09874 1014 aaKnown RBP28.45■■■□□ 2.14
AC005540.1-201ENST00000413911 PTGISQ16647 500 aa28.45■■■□□ 2.14
AC005540.1-201ENST00000413911 IMMTQ16891 758 aaKnown RBP28.45■■■□□ 2.14
AC005540.1-201ENST00000413911 TMEM67Q5HYA8 995 aa28.45■■■□□ 2.14
AC005540.1-201ENST00000413911 IWS1Q96ST2 819 aa28.45■■■□□ 2.14
AC005540.1-201ENST00000413911 CERS4Q9HA82 394 aa28.45■■■□□ 2.14
AC005540.1-201ENST00000413911 DDX41Q9UJV9 622 aaKnown RBP28.45■■■□□ 2.14
AC005540.1-201ENST00000413911 KIAA1217Q5T5P2 1943 aa28.45■■■□□ 2.14
AC005540.1-201ENST00000413911 TNFRSF10AO00220 468 aa28.44■■■□□ 2.14
AC005540.1-201ENST00000413911 PPP1R11O60927 126 aaPredicted RBP28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms