RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 RNF180Q86T96 592 aa11.64□□□□□ -0.55
TMEM248-202ENST00000413593 SENP6Q9GZR1 1112 aaPredicted RBP11.64□□□□□ -0.55
TMEM248-202ENST00000413593 UPF3AQ9H1J1 476 aaKnown RBP11.64□□□□□ -0.55
TMEM248-202ENST00000413593 GNEQ9Y223 722 aaKnown RBP11.64□□□□□ -0.55
TMEM248-202ENST00000413593 NID2Q14112 1375 aa11.64□□□□□ -0.55
TMEM248-202ENST00000413593 MKI67P46013 3256 aaKnown RBP11.63□□□□□ -0.55
TMEM248-202ENST00000413593 RBM47A0AV96 593 aaKnown RBP11.63□□□□□ -0.55
TMEM248-202ENST00000413593 MYADML2A6NDP7 307 aa11.63□□□□□ -0.55
TMEM248-202ENST00000413593 SEC24BO95487 1268 aa11.63□□□□□ -0.55
TMEM248-202ENST00000413593 C6orf222P0C671 652 aaPredicted RBP11.63□□□□□ -0.55
TMEM248-202ENST00000413593 EIF2AK2P19525 551 aaKnown RBP11.63□□□□□ -0.55
TMEM248-202ENST00000413593 CST5P28325 142 aaPredicted RBP11.63□□□□□ -0.55
TMEM248-202ENST00000413593 GJA9P57773 515 aa11.63□□□□□ -0.55
TMEM248-202ENST00000413593 C8orf34Q49A92 452 aa11.63□□□□□ -0.55
TMEM248-202ENST00000413593 TMEM63BQ5T3F8 832 aa11.63□□□□□ -0.55
TMEM248-202ENST00000413593 ARHGEF16Q5VV41 709 aa11.63□□□□□ -0.55
TMEM248-202ENST00000413593 IQSEC1Q6DN90 963 aa11.63□□□□□ -0.55
TMEM248-202ENST00000413593 NOL8Q76FK4 1167 aaKnown RBP11.63□□□□□ -0.55
TMEM248-202ENST00000413593 KLHDC9Q8NEP7 349 aa11.63□□□□□ -0.55
TMEM248-202ENST00000413593 IL17RAQ96F46 866 aa11.63□□□□□ -0.55
TMEM248-202ENST00000413593 IWS1Q96ST2 819 aa11.63□□□□□ -0.55
TMEM248-202ENST00000413593 PXMP2Q9NR77 195 aa11.63□□□□□ -0.55
TMEM248-202ENST00000413593 PHF24Q9UPV7 400 aa11.63□□□□□ -0.55
TMEM248-202ENST00000413593 LCTP09848 1927 aa11.62□□□□□ -0.55
TMEM248-202ENST00000413593 CCDC196A0A1B0GTZ2 297 aa11.62□□□□□ -0.55
TMEM248-202ENST00000413593 CTAGE5O15320 804 aa11.62□□□□□ -0.55
TMEM248-202ENST00000413593 EVI5O60447 810 aa11.62□□□□□ -0.55
TMEM248-202ENST00000413593 NR3C2P08235 984 aa11.62□□□□□ -0.55
TMEM248-202ENST00000413593 PTGS1P23219 599 aa11.62□□□□□ -0.55
TMEM248-202ENST00000413593 PDIA3P30101 505 aaKnown RBP11.62□□□□□ -0.55
TMEM248-202ENST00000413593 ADD1P35611 737 aaKnown RBP11.62□□□□□ -0.55
TMEM248-202ENST00000413593 NKX3-2P78367 333 aa11.62□□□□□ -0.55
TMEM248-202ENST00000413593 IRX5P78411 483 aaPredicted RBP11.62□□□□□ -0.55
TMEM248-202ENST00000413593 STXBP2Q15833 593 aa11.62□□□□□ -0.55
TMEM248-202ENST00000413593 LRRC26Q2I0M4 334 aa11.62□□□□□ -0.55
TMEM248-202ENST00000413593 DUSP28Q4G0W2 176 aa11.62□□□□□ -0.55
TMEM248-202ENST00000413593 CCSAPQ6IQ19 270 aaPredicted RBP11.62□□□□□ -0.55
TMEM248-202ENST00000413593 HEATR3Q7Z4Q2 680 aa11.62□□□□□ -0.55
TMEM248-202ENST00000413593 TLK2Q86UE8 772 aa11.62□□□□□ -0.55
TMEM248-202ENST00000413593 FCHSD1Q86WN1 690 aa11.62□□□□□ -0.55
TMEM248-202ENST00000413593 SCFD2Q8WU76 684 aa11.62□□□□□ -0.55
TMEM248-202ENST00000413593 GPKOWQ92917 476 aaPredicted RBP eCLIP11.62□□□□□ -0.55
TMEM248-202ENST00000413593 FERMT2Q96AC1 680 aa11.62□□□□□ -0.55
TMEM248-202ENST00000413593 PDCD2LQ9BRP1 358 aa11.62□□□□□ -0.55
TMEM248-202ENST00000413593 TSEN34Q9BSV6 310 aaKnown RBP11.62□□□□□ -0.55
TMEM248-202ENST00000413593 WDR11Q9BZH6 1224 aa11.62□□□□□ -0.55
TMEM248-202ENST00000413593 SPC25Q9HBM1 224 aa11.62□□□□□ -0.55
TMEM248-202ENST00000413593 PDRG1Q9NUG6 133 aa11.62□□□□□ -0.55
TMEM248-202ENST00000413593 Q9Y3F1 56 aa11.62□□□□□ -0.55
TMEM248-202ENST00000413593 NR2E3Q9Y5X4 410 aa11.62□□□□□ -0.55
TMEM248-202ENST00000413593 V9GY48 417 aaPredicted RBP11.62□□□□□ -0.55
TMEM248-202ENST00000413593 LRRC37A2A6NM11 1700 aa11.61□□□□□ -0.55
TMEM248-202ENST00000413593 A0A1W2PQ45 241 aaPredicted RBP11.61□□□□□ -0.55
TMEM248-202ENST00000413593 A0A1W2PQY0 241 aa11.61□□□□□ -0.55
TMEM248-202ENST00000413593 MOXD2PA6NHM9 499 aa11.61□□□□□ -0.55
TMEM248-202ENST00000413593 H0YGN5 161 aa11.61□□□□□ -0.55
TMEM248-202ENST00000413593 PIK3CDO00329 1044 aa11.61□□□□□ -0.55
TMEM248-202ENST00000413593 MEIS2O14770 477 aa11.61□□□□□ -0.55
TMEM248-202ENST00000413593 DYNC1LI2O43237 492 aaPredicted RBP11.61□□□□□ -0.55
TMEM248-202ENST00000413593 EIF3JO75822 258 aaKnown RBP11.61□□□□□ -0.55
TMEM248-202ENST00000413593 ACLYP53396 1101 aa11.61□□□□□ -0.55
TMEM248-202ENST00000413593 ATN1P54259 1190 aaPredicted RBP11.61□□□□□ -0.55
TMEM248-202ENST00000413593 PGM5Q15124 567 aa11.61□□□□□ -0.55
TMEM248-202ENST00000413593 KCNA10Q16322 511 aa11.61□□□□□ -0.55
TMEM248-202ENST00000413593 GNASQ5JWF2 1037 aa11.61□□□□□ -0.55
TMEM248-202ENST00000413593 WWC2Q6AWC2 1192 aa11.61□□□□□ -0.55
TMEM248-202ENST00000413593 USP17L6PQ6QN14 398 aa11.61□□□□□ -0.55
TMEM248-202ENST00000413593 PCSK9Q8NBP7 692 aaKnown RBP11.61□□□□□ -0.55
TMEM248-202ENST00000413593 IL31RAQ8NI17 732 aa11.61□□□□□ -0.55
TMEM248-202ENST00000413593 FRMPD4Q14CM0 1322 aa11.6□□□□□ -0.55
TMEM248-202ENST00000413593 FRMPD3Q5JV73 1810 aa11.6□□□□□ -0.55
TMEM248-202ENST00000413593 hCG_1984214I3L0E3 225 aa11.6□□□□□ -0.55
TMEM248-202ENST00000413593 NKRFO15226 690 aaKnown RBP eCLIP11.6□□□□□ -0.55
TMEM248-202ENST00000413593 ARIH2O95376 493 aa11.6□□□□□ -0.55
TMEM248-202ENST00000413593 ASGR1P07306 291 aa11.6□□□□□ -0.55
TMEM248-202ENST00000413593 BEX3Q00994 111 aa11.6□□□□□ -0.55
TMEM248-202ENST00000413593 TTLL4Q14679 1199 aa11.6□□□□□ -0.55
TMEM248-202ENST00000413593 SNX17Q15036 470 aa11.6□□□□□ -0.55
TMEM248-202ENST00000413593 NTRK3Q16288 839 aa11.6□□□□□ -0.55
TMEM248-202ENST00000413593 FSCN1Q16658 493 aaKnown RBP11.6□□□□□ -0.55
TMEM248-202ENST00000413593 TYW1BQ6NUM6 668 aa11.6□□□□□ -0.55
TMEM248-202ENST00000413593 PPP1R18Q6NYC8 613 aa11.6□□□□□ -0.55
TMEM248-202ENST00000413593 CCDC62Q6P9F0 684 aa11.6□□□□□ -0.55
TMEM248-202ENST00000413593 SLC39A5Q6ZMH5 540 aa11.6□□□□□ -0.55
TMEM248-202ENST00000413593 SEPT14Q6ZU15 432 aa11.6□□□□□ -0.55
TMEM248-202ENST00000413593 VSIG10LQ86VR7 867 aa11.6□□□□□ -0.55
TMEM248-202ENST00000413593 C7orf61Q8IZ16 206 aa11.6□□□□□ -0.55
TMEM248-202ENST00000413593 ZNF713Q8N859 430 aaPredicted RBP11.6□□□□□ -0.55
TMEM248-202ENST00000413593 SMARCC2Q8TAQ2 1214 aa11.6□□□□□ -0.55
TMEM248-202ENST00000413593 CUL5Q93034 780 aa11.6□□□□□ -0.55
TMEM248-202ENST00000413593 ZNF274Q96GC6 653 aaPredicted RBP11.6□□□□□ -0.55
TMEM248-202ENST00000413593 LARP6Q9BRS8 491 aaKnown RBP11.6□□□□□ -0.55
TMEM248-202ENST00000413593 AP5M1Q9H0R1 490 aa11.6□□□□□ -0.55
TMEM248-202ENST00000413593 ALDH8A1Q9H2A2 487 aaPredicted RBP11.6□□□□□ -0.55
TMEM248-202ENST00000413593 PSTPIP2Q9H939 334 aa11.6□□□□□ -0.55
TMEM248-202ENST00000413593 BAZ2BQ9UIF8 2168 aaKnown RBP11.6□□□□□ -0.55
TMEM248-202ENST00000413593 STXBP3O00186 592 aa11.59□□□□□ -0.55
TMEM248-202ENST00000413593 PRPF3O43395 683 aaKnown RBP11.59□□□□□ -0.55
TMEM248-202ENST00000413593 RGS20O76081 388 aa11.59□□□□□ -0.55
TMEM248-202ENST00000413593 TXNP10599 105 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms