RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 COLQQ9Y215 455 aaPredicted RBP18.73■□□□□ 0.59
DDR1-230ENST00000412274 SNX14Q9Y5W7 946 aa18.73■□□□□ 0.59
DDR1-230ENST00000412274 LRRC37A2A6NM11 1700 aa18.73■□□□□ 0.59
DDR1-230ENST00000412274 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.72■□□□□ 0.59
DDR1-230ENST00000412274 DYNC1LI2O43237 492 aaPredicted RBP18.72■□□□□ 0.59
DDR1-230ENST00000412274 ADCY6O43306 1168 aa18.72■□□□□ 0.59
DDR1-230ENST00000412274 CPT1AP50416 773 aa18.72■□□□□ 0.59
DDR1-230ENST00000412274 FSCN1Q16658 493 aaKnown RBP18.72■□□□□ 0.59
DDR1-230ENST00000412274 SLC35G1Q2M3R5 365 aa18.72■□□□□ 0.59
DDR1-230ENST00000412274 HABP4Q5JVS0 413 aaKnown RBP18.72■□□□□ 0.59
DDR1-230ENST00000412274 KCNV1Q6PIU1 500 aa18.72■□□□□ 0.59
DDR1-230ENST00000412274 CHRDL2Q6WN34 429 aa18.72■□□□□ 0.59
DDR1-230ENST00000412274 SRBD1Q8N5C6 995 aaKnown RBP18.72■□□□□ 0.59
DDR1-230ENST00000412274 TBC1D5Q92609 795 aa18.72■□□□□ 0.59
DDR1-230ENST00000412274 CUL5Q93034 780 aa18.72■□□□□ 0.59
DDR1-230ENST00000412274 LENG1Q96BZ8 264 aaPredicted RBP18.72■□□□□ 0.59
DDR1-230ENST00000412274 JAKMIP1Q96N16 626 aaKnown RBP18.72■□□□□ 0.59
DDR1-230ENST00000412274 LRRC2Q9BYS8 371 aa18.72■□□□□ 0.59
DDR1-230ENST00000412274 PXMP2Q9NR77 195 aa18.72■□□□□ 0.59
DDR1-230ENST00000412274 PDGFCQ9NRA1 345 aa18.72■□□□□ 0.59
DDR1-230ENST00000412274 ATP11BQ9Y2G3 1177 aa18.72■□□□□ 0.59
DDR1-230ENST00000412274 OPLAHO14841 1288 aa18.71■□□□□ 0.59
DDR1-230ENST00000412274 KPNA6O60684 536 aa18.71■□□□□ 0.59
DDR1-230ENST00000412274 TMTC3Q6ZXV5 915 aa18.71■□□□□ 0.59
DDR1-230ENST00000412274 ANKRD33Q7Z3H0 272 aa18.71■□□□□ 0.59
DDR1-230ENST00000412274 MICU3Q86XE3 530 aa18.71■□□□□ 0.59
DDR1-230ENST00000412274 LBHD1Q9BQE6 289 aaPredicted RBP18.71■□□□□ 0.59
DDR1-230ENST00000412274 POLR3EQ9NVU0 708 aa18.71■□□□□ 0.59
DDR1-230ENST00000412274 A0A0U1RQG5 324 aaPredicted RBP18.7■□□□□ 0.58
DDR1-230ENST00000412274 DCDC2CA8MYV0 355 aa18.7■□□□□ 0.58
DDR1-230ENST00000412274 hCG_1984214I3L0E3 225 aa18.7■□□□□ 0.58
DDR1-230ENST00000412274 PIK3CDO00329 1044 aa18.7■□□□□ 0.58
DDR1-230ENST00000412274 CTAGE5O15320 804 aa18.7■□□□□ 0.58
DDR1-230ENST00000412274 STAM2O75886 525 aa18.7■□□□□ 0.58
DDR1-230ENST00000412274 NR3C2P08235 984 aa18.7■□□□□ 0.58
DDR1-230ENST00000412274 TRIM60Q495X7 471 aa18.7■□□□□ 0.58
DDR1-230ENST00000412274 ZNF713Q8N859 430 aaPredicted RBP18.7■□□□□ 0.58
DDR1-230ENST00000412274 VTI1AQ96AJ9 217 aa18.7■□□□□ 0.58
DDR1-230ENST00000412274 GDF15Q99988 308 aa18.7■□□□□ 0.58
DDR1-230ENST00000412274 USP26Q9BXU7 913 aa18.7■□□□□ 0.58
DDR1-230ENST00000412274 TM6SF1Q9BZW5 370 aa18.7■□□□□ 0.58
DDR1-230ENST00000412274 PRO3102Q9H379 93 aa18.7■□□□□ 0.58
DDR1-230ENST00000412274 COL20A1Q9P218 1284 aa18.7■□□□□ 0.58
DDR1-230ENST00000412274 ZMYND8Q9ULU4 1186 aaPredicted RBP18.7■□□□□ 0.58
DDR1-230ENST00000412274 PLEKHA8P1O95397 391 aa18.69■□□□□ 0.58
DDR1-230ENST00000412274 TXNP10599 105 aaKnown RBP18.69■□□□□ 0.58
DDR1-230ENST00000412274 TGFB3P10600 412 aa18.69■□□□□ 0.58
DDR1-230ENST00000412274 RPS6KB1P23443 525 aa18.69■□□□□ 0.58
DDR1-230ENST00000412274 RTN1Q16799 776 aa18.69■□□□□ 0.58
DDR1-230ENST00000412274 XRRA1Q6P2D8 792 aa18.69■□□□□ 0.58
DDR1-230ENST00000412274 PDCD2LQ9BRP1 358 aa18.69■□□□□ 0.58
DDR1-230ENST00000412274 KLF18A0A0U1RQI7 1052 aa18.68■□□□□ 0.58
DDR1-230ENST00000412274 MYADML2A6NDP7 307 aa18.68■□□□□ 0.58
DDR1-230ENST00000412274 ARVCFO00192 962 aa18.68■□□□□ 0.58
DDR1-230ENST00000412274 TLR3O15455 904 aaKnown RBP18.68■□□□□ 0.58
DDR1-230ENST00000412274 CLTBP09497 229 aa18.68■□□□□ 0.58
DDR1-230ENST00000412274 EIF2AK2P19525 551 aaKnown RBP18.68■□□□□ 0.58
DDR1-230ENST00000412274 RXRAP19793 462 aa18.68■□□□□ 0.58
DDR1-230ENST00000412274 CCND2P30279 289 aa18.68■□□□□ 0.58
DDR1-230ENST00000412274 TLE2Q04725 743 aa18.68■□□□□ 0.58
DDR1-230ENST00000412274 COL9A3Q14050 684 aaPredicted RBP18.68■□□□□ 0.58
DDR1-230ENST00000412274 VSIG10LQ86VR7 867 aa18.68■□□□□ 0.58
DDR1-230ENST00000412274 OR6J1Q8NGC5 347 aa18.68■□□□□ 0.58
DDR1-230ENST00000412274 AGXT2Q9BYV1 514 aa18.68■□□□□ 0.58
DDR1-230ENST00000412274 GLT8D2Q9H1C3 349 aa18.68■□□□□ 0.58
DDR1-230ENST00000412274 RBM27Q9P2N5 1060 aaKnown RBP18.68■□□□□ 0.58
DDR1-230ENST00000412274 GOLGA8AA7E2F4 631 aa18.67■□□□□ 0.58
DDR1-230ENST00000412274 GOLGA8BA8MQT2 603 aa18.67■□□□□ 0.58
DDR1-230ENST00000412274 SYN1P17600 705 aa18.67■□□□□ 0.58
DDR1-230ENST00000412274 CASTP20810 708 aaKnown RBP18.67■□□□□ 0.58
DDR1-230ENST00000412274 MAGEA10P43363 369 aaPredicted RBP18.67■□□□□ 0.58
DDR1-230ENST00000412274 METAP2P50579 478 aaKnown RBP eCLIP18.67■□□□□ 0.58
DDR1-230ENST00000412274 CDK7P50613 346 aa18.67■□□□□ 0.58
DDR1-230ENST00000412274 PGM5Q15124 567 aa18.67■□□□□ 0.58
DDR1-230ENST00000412274 CCDC62Q6P9F0 684 aa18.67■□□□□ 0.58
DDR1-230ENST00000412274 Q6ZUG5 572 aa18.67■□□□□ 0.58
DDR1-230ENST00000412274 RUFY3Q7L099 469 aa18.67■□□□□ 0.58
DDR1-230ENST00000412274 SMARCC2Q8TAQ2 1214 aa18.67■□□□□ 0.58
DDR1-230ENST00000412274 PSTPIP2Q9H939 334 aa18.67■□□□□ 0.58
DDR1-230ENST00000412274 BRPF3Q9ULD4 1205 aa18.67■□□□□ 0.58
DDR1-230ENST00000412274 DDX49Q9Y6V7 483 aaKnown RBP18.67■□□□□ 0.58
DDR1-230ENST00000412274 A6NJR5 290 aa18.66■□□□□ 0.58
DDR1-230ENST00000412274 GH1P01241 217 aa18.66■□□□□ 0.58
DDR1-230ENST00000412274 HOXA13P31271 388 aaPredicted RBP18.66■□□□□ 0.58
DDR1-230ENST00000412274 BEX3Q00994 111 aa18.66■□□□□ 0.58
DDR1-230ENST00000412274 GNPTABQ3T906 1256 aa18.66■□□□□ 0.58
DDR1-230ENST00000412274 PPP1R18Q6NYC8 613 aa18.66■□□□□ 0.58
DDR1-230ENST00000412274 SEPT14Q6ZU15 432 aa18.66■□□□□ 0.58
DDR1-230ENST00000412274 SLC43A3Q8NBI5 491 aa18.66■□□□□ 0.58
DDR1-230ENST00000412274 PIBF1Q8WXW3 757 aa18.66■□□□□ 0.58
DDR1-230ENST00000412274 EMID1Q96A84 441 aaPredicted RBP18.66■□□□□ 0.58
DDR1-230ENST00000412274 TCEANC2Q96MN5 208 aa18.66■□□□□ 0.58
DDR1-230ENST00000412274 ZSWIM6Q9HCJ5 1215 aa18.66■□□□□ 0.58
DDR1-230ENST00000412274 PDLIM7Q9NR12 457 aa18.66■□□□□ 0.58
DDR1-230ENST00000412274 CYP46A1Q9Y6A2 500 aa18.66■□□□□ 0.58
DDR1-230ENST00000412274 FRMPD4Q14CM0 1322 aa18.66■□□□□ 0.58
DDR1-230ENST00000412274 NID2Q14112 1375 aa18.66■□□□□ 0.58
DDR1-230ENST00000412274 CEP290O15078 2479 aa18.65■□□□□ 0.58
DDR1-230ENST00000412274 KIAA0355O15063 1070 aa18.65■□□□□ 0.58
DDR1-230ENST00000412274 PQBP1O60828 265 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms