RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 AIFM3Q96NN9 605 aa16.05■□□□□ 0.16
CPNE1-206ENST00000412056 DEFB118Q96PH6 123 aa16.05■□□□□ 0.16
CPNE1-206ENST00000412056 RMDN3Q96TC7 470 aa16.05■□□□□ 0.16
CPNE1-206ENST00000412056 KATNBL1Q9H079 304 aa16.05■□□□□ 0.16
CPNE1-206ENST00000412056 PSTPIP2Q9H939 334 aa16.05■□□□□ 0.16
CPNE1-206ENST00000412056 PXMP2Q9NR77 195 aa16.05■□□□□ 0.16
CPNE1-206ENST00000412056 NRBP1Q9UHY1 535 aa16.05■□□□□ 0.16
CPNE1-206ENST00000412056 DOCK5Q9H7D0 1870 aa16.04■□□□□ 0.16
CPNE1-206ENST00000412056 LOC102724159A0A0B4J2E5 919 aa16.04■□□□□ 0.16
CPNE1-206ENST00000412056 PIK3CDO00329 1044 aa16.04■□□□□ 0.16
CPNE1-206ENST00000412056 DEXIO95424 95 aa16.04■□□□□ 0.16
CPNE1-206ENST00000412056 GJB1P08034 283 aa16.04■□□□□ 0.16
CPNE1-206ENST00000412056 EDNRBP24530 442 aa16.04■□□□□ 0.16
CPNE1-206ENST00000412056 ADCY7P51828 1080 aa16.04■□□□□ 0.16
CPNE1-206ENST00000412056 ACVR2BQ13705 512 aa16.04■□□□□ 0.16
CPNE1-206ENST00000412056 PWP2Q15269 919 aaKnown RBP16.04■□□□□ 0.16
CPNE1-206ENST00000412056 ARHGEF16Q5VV41 709 aa16.04■□□□□ 0.16
CPNE1-206ENST00000412056 ANO1Q5XXA6 986 aa16.04■□□□□ 0.16
CPNE1-206ENST00000412056 NSUN7Q8NE18 718 aaKnown RBP16.04■□□□□ 0.16
CPNE1-206ENST00000412056 IL31RAQ8NI17 732 aa16.04■□□□□ 0.16
CPNE1-206ENST00000412056 NSUN6Q8TEA1 469 aaKnown RBP16.04■□□□□ 0.16
CPNE1-206ENST00000412056 ABHD16BQ9H3Z7 469 aa16.04■□□□□ 0.16
CPNE1-206ENST00000412056 SH2B1Q9NRF2 756 aaPredicted RBP16.04■□□□□ 0.16
CPNE1-206ENST00000412056 VPS54Q9P1Q0 977 aa16.04■□□□□ 0.16
CPNE1-206ENST00000412056 SMCO2A6NFE2 343 aa16.03■□□□□ 0.16
CPNE1-206ENST00000412056 JAK2O60674 1132 aa16.03■□□□□ 0.16
CPNE1-206ENST00000412056 PDE4DQ08499 809 aa16.03■□□□□ 0.16
CPNE1-206ENST00000412056 U2AF1L4Q8WU68 220 aaKnown RBP16.03■□□□□ 0.16
CPNE1-206ENST00000412056 LENG1Q96BZ8 264 aaPredicted RBP16.03■□□□□ 0.16
CPNE1-206ENST00000412056 PDCD2LQ9BRP1 358 aa16.03■□□□□ 0.16
CPNE1-206ENST00000412056 RIC8AQ9NPQ8 531 aa16.03■□□□□ 0.16
CPNE1-206ENST00000412056 ORC3Q9UBD5 711 aaPredicted RBP16.03■□□□□ 0.16
CPNE1-206ENST00000412056 DDX20Q9UHI6 824 aaKnown RBP16.03■□□□□ 0.16
CPNE1-206ENST00000412056 FRMPD4Q14CM0 1322 aa16.02■□□□□ 0.16
CPNE1-206ENST00000412056 ESYT2A0FGR8 921 aa16.02■□□□□ 0.16
CPNE1-206ENST00000412056 ADAMTS3O15072 1205 aa16.02■□□□□ 0.16
CPNE1-206ENST00000412056 SEPT4O43236 478 aa16.02■□□□□ 0.16
CPNE1-206ENST00000412056 ADCY6O43306 1168 aa16.02■□□□□ 0.16
CPNE1-206ENST00000412056 EN2P19622 333 aaPredicted RBP16.02■□□□□ 0.16
CPNE1-206ENST00000412056 GJA8P48165 433 aa16.02■□□□□ 0.16
CPNE1-206ENST00000412056 PGM5Q15124 567 aa16.02■□□□□ 0.16
CPNE1-206ENST00000412056 LHX8Q68G74 356 aa16.02■□□□□ 0.16
CPNE1-206ENST00000412056 IL27Q8NEV9 243 aa16.02■□□□□ 0.16
CPNE1-206ENST00000412056 CCDC148Q8NFR7 591 aa16.02■□□□□ 0.16
CPNE1-206ENST00000412056 MPHOSPH6Q99547 160 aaKnown RBP16.02■□□□□ 0.16
CPNE1-206ENST00000412056 ZMYND12Q9H0C1 365 aa16.02■□□□□ 0.16
CPNE1-206ENST00000412056 VTA1Q9NP79 307 aa16.02■□□□□ 0.16
CPNE1-206ENST00000412056 PDGFCQ9NRA1 345 aa16.02■□□□□ 0.16
CPNE1-206ENST00000412056 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.01■□□□□ 0.15
CPNE1-206ENST00000412056 B4DLN1 442 aa16.01■□□□□ 0.15
CPNE1-206ENST00000412056 SGPL1O95470 568 aa16.01■□□□□ 0.15
CPNE1-206ENST00000412056 NR3C2P08235 984 aa16.01■□□□□ 0.15
CPNE1-206ENST00000412056 MYCLP12524 364 aaPredicted RBP16.01■□□□□ 0.15
CPNE1-206ENST00000412056 FDPSP14324 419 aaKnown RBP16.01■□□□□ 0.15
CPNE1-206ENST00000412056 AKR1A1P14550 325 aa16.01■□□□□ 0.15
CPNE1-206ENST00000412056 MRPL12P52815 198 aaKnown RBP16.01■□□□□ 0.15
CPNE1-206ENST00000412056 CCDC144BQ3MJ40 725 aa16.01■□□□□ 0.15
CPNE1-206ENST00000412056 TAPT1Q6NXT6 567 aa16.01■□□□□ 0.15
CPNE1-206ENST00000412056 CCDC12Q8WUD4 166 aaPredicted RBP16.01■□□□□ 0.15
CPNE1-206ENST00000412056 TMX3Q96JJ7 454 aa16.01■□□□□ 0.15
CPNE1-206ENST00000412056 ZFP91Q96JP5 570 aaPredicted RBP16.01■□□□□ 0.15
CPNE1-206ENST00000412056 PGBD1Q96JS3 809 aa16.01■□□□□ 0.15
CPNE1-206ENST00000412056 IWS1Q96ST2 819 aa16.01■□□□□ 0.15
CPNE1-206ENST00000412056 CRISPLD2Q9H0B8 497 aa16.01■□□□□ 0.15
CPNE1-206ENST00000412056 SH3GLB2Q9NR46 395 aa16.01■□□□□ 0.15
CPNE1-206ENST00000412056 TMEM260Q9NX78 707 aa16.01■□□□□ 0.15
CPNE1-206ENST00000412056 FAM184BQ9ULE4 1060 aa16.01■□□□□ 0.15
CPNE1-206ENST00000412056 MSCO60682 206 aa16■□□□□ 0.15
CPNE1-206ENST00000412056 ADCYAP1R1P41586 468 aa16■□□□□ 0.15
CPNE1-206ENST00000412056 CLK2P49760 499 aaKnown RBP16■□□□□ 0.15
CPNE1-206ENST00000412056 NLRP5P59047 1200 aa16■□□□□ 0.15
CPNE1-206ENST00000412056 STXBP2Q15833 593 aa16■□□□□ 0.15
CPNE1-206ENST00000412056 ALG1Q9BT22 464 aa16■□□□□ 0.15
CPNE1-206ENST00000412056 ANO3Q9BYT9 981 aa16■□□□□ 0.15
CPNE1-206ENST00000412056 C6orf50Q9HD87 102 aa16■□□□□ 0.15
CPNE1-206ENST00000412056 GJB4Q9NTQ9 266 aa16■□□□□ 0.15
CPNE1-206ENST00000412056 PCDHA6Q9UN73 950 aa16■□□□□ 0.15
CPNE1-206ENST00000412056 PCDHA8Q9Y5H6 950 aa16■□□□□ 0.15
CPNE1-206ENST00000412056 SPDYE3A6NKU9 549 aa15.99■□□□□ 0.15
CPNE1-206ENST00000412056 TFRCP02786 760 aaKnown RBP15.99■□□□□ 0.15
CPNE1-206ENST00000412056 PTGS1P23219 599 aa15.99■□□□□ 0.15
CPNE1-206ENST00000412056 CCND2P30279 289 aa15.99■□□□□ 0.15
CPNE1-206ENST00000412056 MCM2P49736 904 aa15.99■□□□□ 0.15
CPNE1-206ENST00000412056 FOSBP53539 338 aa15.99■□□□□ 0.15
CPNE1-206ENST00000412056 TMEM63BQ5T3F8 832 aa15.99■□□□□ 0.15
CPNE1-206ENST00000412056 JAKMIP3Q5VZ66 844 aa15.99■□□□□ 0.15
CPNE1-206ENST00000412056 RASGRP4Q8TDF6 673 aa15.99■□□□□ 0.15
CPNE1-206ENST00000412056 LLPHQ9BRT6 129 aaKnown RBP15.99■□□□□ 0.15
CPNE1-206ENST00000412056 GLT8D2Q9H1C3 349 aa15.99■□□□□ 0.15
CPNE1-206ENST00000412056 OGDHLQ9ULD0 1010 aa15.99■□□□□ 0.15
CPNE1-206ENST00000412056 ALPK3Q96L96 1907 aa15.98■□□□□ 0.15
CPNE1-206ENST00000412056 RBM47A0AV96 593 aaKnown RBP15.98■□□□□ 0.15
CPNE1-206ENST00000412056 RARBP10826 455 aa15.98■□□□□ 0.15
CPNE1-206ENST00000412056 SMPD1P17405 629 aa15.98■□□□□ 0.15
CPNE1-206ENST00000412056 GNA11P29992 359 aa15.98■□□□□ 0.15
CPNE1-206ENST00000412056 AP3B2Q13367 1082 aa15.98■□□□□ 0.15
CPNE1-206ENST00000412056 NPY5RQ15761 445 aa15.98■□□□□ 0.15
CPNE1-206ENST00000412056 GJC2Q5T442 439 aaPredicted RBP15.98■□□□□ 0.15
CPNE1-206ENST00000412056 SEPT14Q6ZU15 432 aa15.98■□□□□ 0.15
CPNE1-206ENST00000412056 VSIG10LQ86VR7 867 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms