RNA–Protein interactions for RNA: ENST00000412011.5

ITSN2-205, Transcript of intersectin 2, humanhuman

TSL 1 (best)

Gene ITSN2, Length 2,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-205ENST00000412011 SEMA3FQ13275 785 aa23.17■■□□□ 1.3
ITSN2-205ENST00000412011 ARMCX5Q6P1M9 558 aa23.17■■□□□ 1.3
ITSN2-205ENST00000412011 MOXD1Q6UVY6 613 aa23.17■■□□□ 1.3
ITSN2-205ENST00000412011 CCDC150Q8NCX0 1101 aa23.17■■□□□ 1.3
ITSN2-205ENST00000412011 NUDT12Q9BQG2 462 aa23.17■■□□□ 1.3
ITSN2-205ENST00000412011 RANBP17Q9H2T7 1088 aaKnown RBP23.17■■□□□ 1.3
ITSN2-205ENST00000412011 BLOC1S4Q9NUP1 217 aa23.17■■□□□ 1.3
ITSN2-205ENST00000412011 STK17AQ9UEE5 414 aa23.17■■□□□ 1.3
ITSN2-205ENST00000412011 MARCH6O60337 910 aa23.16■■□□□ 1.3
ITSN2-205ENST00000412011 PAK1Q13153 545 aa23.16■■□□□ 1.3
ITSN2-205ENST00000412011 SNX29Q8TEQ0 813 aa23.16■■□□□ 1.3
ITSN2-205ENST00000412011 COBLO75128 1261 aa23.15■■□□□ 1.3
ITSN2-205ENST00000412011 SKILP12757 684 aa23.15■■□□□ 1.3
ITSN2-205ENST00000412011 TRAF1Q13077 416 aa23.15■■□□□ 1.3
ITSN2-205ENST00000412011 KRT79Q5XKE5 535 aa23.15■■□□□ 1.3
ITSN2-205ENST00000412011 FAM160B2Q86V87 743 aa23.15■■□□□ 1.3
ITSN2-205ENST00000412011 NELFBQ8WX92 580 aa23.15■■□□□ 1.3
ITSN2-205ENST00000412011 KIFC2Q96AC6 838 aa23.15■■□□□ 1.3
ITSN2-205ENST00000412011 KCNMB3Q9NPA1 279 aa23.15■■□□□ 1.3
ITSN2-205ENST00000412011 HACL1Q9UJ83 578 aa23.15■■□□□ 1.3
ITSN2-205ENST00000412011 PCDHA12Q9UN75 941 aa23.15■■□□□ 1.3
ITSN2-205ENST00000412011 ZNF541Q9H0D2 1346 aa23.15■■□□□ 1.3
ITSN2-205ENST00000412011 SPDYE3A6NKU9 549 aa23.15■■□□□ 1.3
ITSN2-205ENST00000412011 SREBF1P36956 1147 aa23.15■■□□□ 1.3
ITSN2-205ENST00000412011 AMPD3Q01432 767 aa23.15■■□□□ 1.3
ITSN2-205ENST00000412011 APTXQ7Z2E3 356 aaKnown RBP23.15■■□□□ 1.3
ITSN2-205ENST00000412011 ADSSL1Q8N142 457 aa23.15■■□□□ 1.3
ITSN2-205ENST00000412011 CDK5RAP3Q96JB5 506 aa23.15■■□□□ 1.3
ITSN2-205ENST00000412011 MAPK8IP1Q9UQF2 711 aa23.15■■□□□ 1.3
ITSN2-205ENST00000412011 PIK3CDO00329 1044 aa23.14■■□□□ 1.29
ITSN2-205ENST00000412011 HOXA13P31271 388 aaPredicted RBP23.14■■□□□ 1.29
ITSN2-205ENST00000412011 PTPN21Q16825 1174 aa23.14■■□□□ 1.29
ITSN2-205ENST00000412011 TMEM119Q4V9L6 283 aa23.14■■□□□ 1.29
ITSN2-205ENST00000412011 CCDC174Q6PII3 467 aa23.14■■□□□ 1.29
ITSN2-205ENST00000412011 ZNF341Q9BYN7 854 aa23.14■■□□□ 1.29
ITSN2-205ENST00000412011 FEM1BQ9UK73 627 aa23.14■■□□□ 1.29
ITSN2-205ENST00000412011 DHX8Q14562 1220 aaKnown RBP23.13■■□□□ 1.29
ITSN2-205ENST00000412011 KIF4BQ2VIQ3 1234 aa23.13■■□□□ 1.29
ITSN2-205ENST00000412011 SV2BQ7L1I2 683 aa23.13■■□□□ 1.29
ITSN2-205ENST00000412011 GIMAP8Q8ND71 665 aaPredicted RBP23.13■■□□□ 1.29
ITSN2-205ENST00000412011 FBXO28Q9NVF7 368 aa23.13■■□□□ 1.29
ITSN2-205ENST00000412011 A0A1B0GTH6 734 aa23.13■■□□□ 1.29
ITSN2-205ENST00000412011 ASIC1P78348 528 aa23.13■■□□□ 1.29
ITSN2-205ENST00000412011 MCM6Q14566 821 aa23.13■■□□□ 1.29
ITSN2-205ENST00000412011 NR1I3Q14994 352 aa23.13■■□□□ 1.29
ITSN2-205ENST00000412011 TPD52L1Q16890 204 aaPredicted RBP23.13■■□□□ 1.29
ITSN2-205ENST00000412011 UIMC1Q96RL1 719 aa23.13■■□□□ 1.29
ITSN2-205ENST00000412011 FEZ1Q99689 392 aa23.13■■□□□ 1.29
ITSN2-205ENST00000412011 SFPQP23246 707 aaKnown RBP eCLIP23.12■■□□□ 1.29
ITSN2-205ENST00000412011 LARP4BQ92615 738 aaKnown RBP23.12■■□□□ 1.29
ITSN2-205ENST00000412011 UPF1Q92900 1129 aaKnown RBP eCLIP23.12■■□□□ 1.29
ITSN2-205ENST00000412011 CCDC47Q96A33 483 aaKnown RBP23.12■■□□□ 1.29
ITSN2-205ENST00000412011 DEFB129Q9H1M3 183 aa23.12■■□□□ 1.29
ITSN2-205ENST00000412011 DICER1Q9UPY3 1922 aaKnown RBP23.12■■□□□ 1.29
ITSN2-205ENST00000412011 ECM1Q16610 540 aa23.12■■□□□ 1.29
ITSN2-205ENST00000412011 Q4G0T1 1027 aa23.12■■□□□ 1.29
ITSN2-205ENST00000412011 DNTTIP2Q5QJE6 756 aaKnown RBP23.12■■□□□ 1.29
ITSN2-205ENST00000412011 KCNK18Q7Z418 384 aa23.12■■□□□ 1.29
ITSN2-205ENST00000412011 RAD54LQ92698 747 aa23.12■■□□□ 1.29
ITSN2-205ENST00000412011 PRR16Q569H4 304 aa23.11■■□□□ 1.29
ITSN2-205ENST00000412011 TEX2Q8IWB9 1127 aa23.11■■□□□ 1.29
ITSN2-205ENST00000412011 ETNPPLQ8TBG4 499 aa23.11■■□□□ 1.29
ITSN2-205ENST00000412011 LENG9Q96B70 501 aa23.11■■□□□ 1.29
ITSN2-205ENST00000412011 EXOC1Q9NV70 894 aa23.11■■□□□ 1.29
ITSN2-205ENST00000412011 R3HCC1Q9Y3T6 440 aaKnown RBP23.11■■□□□ 1.29
ITSN2-205ENST00000412011 DOCK1Q14185 1865 aa23.11■■□□□ 1.29
ITSN2-205ENST00000412011 MYMKA6NI61 221 aa23.1■■□□□ 1.29
ITSN2-205ENST00000412011 CIITAP33076 1130 aa23.1■■□□□ 1.29
ITSN2-205ENST00000412011 PDE4DQ08499 809 aa23.1■■□□□ 1.29
ITSN2-205ENST00000412011 TBX2Q13207 712 aaPredicted RBP23.1■■□□□ 1.29
ITSN2-205ENST00000412011 HYIQ5T013 277 aa23.1■■□□□ 1.29
ITSN2-205ENST00000412011 SAMD1Q6SPF0 538 aaPredicted RBP23.1■■□□□ 1.29
ITSN2-205ENST00000412011 SLFN12Q8IYM2 578 aa23.1■■□□□ 1.29
ITSN2-205ENST00000412011 TBC1D5Q92609 795 aa23.1■■□□□ 1.29
ITSN2-205ENST00000412011 GINM1Q9NU53 330 aa23.1■■□□□ 1.29
ITSN2-205ENST00000412011 FAM86B1E9PN63 330 aa23.1■■□□□ 1.29
ITSN2-205ENST00000412011 CTNND1O60716 968 aaKnown RBP23.1■■□□□ 1.29
ITSN2-205ENST00000412011 FAM86B2P0C5J1 330 aa23.1■■□□□ 1.29
ITSN2-205ENST00000412011 INPP5BP32019 993 aa23.1■■□□□ 1.29
ITSN2-205ENST00000412011 NBPF12Q5TAG4 269 aaPredicted RBP23.1■■□□□ 1.29
ITSN2-205ENST00000412011 FCHSD1Q86WN1 690 aa23.1■■□□□ 1.29
ITSN2-205ENST00000412011 ADD3Q9UEY8 706 aaKnown RBP23.1■■□□□ 1.29
ITSN2-205ENST00000412011 TBX3O15119 743 aa23.09■■□□□ 1.29
ITSN2-205ENST00000412011 CFBP00751 764 aa23.09■■□□□ 1.29
ITSN2-205ENST00000412011 CYP3A4P08684 503 aa23.09■■□□□ 1.29
ITSN2-205ENST00000412011 STIM1Q13586 685 aa23.09■■□□□ 1.29
ITSN2-205ENST00000412011 MRPL11Q9Y3B7 192 aaKnown RBP23.09■■□□□ 1.29
ITSN2-205ENST00000412011 TRIM49BA6NDI0 452 aa23.09■■□□□ 1.29
ITSN2-205ENST00000412011 CCT6AP40227 531 aaKnown RBP23.09■■□□□ 1.29
ITSN2-205ENST00000412011 SPECC1LQ69YQ0 1117 aa23.09■■□□□ 1.29
ITSN2-205ENST00000412011 CTAGE1Q96RT6 745 aa23.09■■□□□ 1.29
ITSN2-205ENST00000412011 KIAA1683Q9H0B3 1180 aa23.09■■□□□ 1.29
ITSN2-205ENST00000412011 LIMA1Q9UHB6 759 aaKnown RBP23.09■■□□□ 1.29
ITSN2-205ENST00000412011 KDM3AQ9Y4C1 1321 aa23.08■■□□□ 1.29
ITSN2-205ENST00000412011 GCOM1H8Y6P7 765 aaPredicted RBP23.08■■□□□ 1.29
ITSN2-205ENST00000412011 PSMA7O14818 248 aa23.08■■□□□ 1.29
ITSN2-205ENST00000412011 TEX33O43247 280 aa23.08■■□□□ 1.29
ITSN2-205ENST00000412011 POLR2MP0CAP2 368 aa23.08■■□□□ 1.29
ITSN2-205ENST00000412011 PMS1P54277 932 aaKnown RBP23.08■■□□□ 1.29
ITSN2-205ENST00000412011 LDHDQ86WU2 507 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms