RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 IGFBP6P24592 240 aaPredicted RBP7.47□□□□□ -1.21
HDAC9-205ENST00000411993 KCNJ6P48051 423 aa7.47□□□□□ -1.21
HDAC9-205ENST00000411993 MRM1Q6IN84 353 aaKnown RBP7.47□□□□□ -1.21
HDAC9-205ENST00000411993 IQCEQ6IPM2 695 aa7.47□□□□□ -1.21
HDAC9-205ENST00000411993 SLC43A3Q8NBI5 491 aa7.47□□□□□ -1.21
HDAC9-205ENST00000411993 FRS2Q8WU20 508 aa7.47□□□□□ -1.21
HDAC9-205ENST00000411993 HNRNPLLQ8WVV9 542 aaKnown RBP7.47□□□□□ -1.21
HDAC9-205ENST00000411993 KRTAP4-9Q9BYQ8 210 aa7.47□□□□□ -1.21
HDAC9-205ENST00000411993 BCAS3Q9H6U6 928 aa7.47□□□□□ -1.21
HDAC9-205ENST00000411993 PARD6AQ9NPB6 346 aa7.47□□□□□ -1.21
HDAC9-205ENST00000411993 MEFVO15553 781 aaPredicted RBP7.46□□□□□ -1.22
HDAC9-205ENST00000411993 TRIM13O60858 407 aa7.46□□□□□ -1.22
HDAC9-205ENST00000411993 NTRK1P04629 796 aa7.46□□□□□ -1.22
HDAC9-205ENST00000411993 ASGR2P07307 311 aa7.46□□□□□ -1.22
HDAC9-205ENST00000411993 FBLN1P23142 703 aa7.46□□□□□ -1.22
HDAC9-205ENST00000411993 HOXC12P31275 282 aa7.46□□□□□ -1.22
HDAC9-205ENST00000411993 SLC9A5Q14940 896 aa7.46□□□□□ -1.22
HDAC9-205ENST00000411993 ANKS3Q6ZW76 656 aa7.46□□□□□ -1.22
HDAC9-205ENST00000411993 TEX2Q8IWB9 1127 aa7.46□□□□□ -1.22
HDAC9-205ENST00000411993 NPLOC4Q8TAT6 608 aa7.46□□□□□ -1.22
HDAC9-205ENST00000411993 ST7Q9NRC1 585 aa7.46□□□□□ -1.22
HDAC9-205ENST00000411993 RAPGEFL1Q9UHV5 662 aa7.46□□□□□ -1.22
HDAC9-205ENST00000411993 MYO1BO43795 1136 aa7.45□□□□□ -1.22
HDAC9-205ENST00000411993 SASH1O94885 1247 aa7.45□□□□□ -1.22
HDAC9-205ENST00000411993 ZBTB7AO95365 584 aa7.45□□□□□ -1.22
HDAC9-205ENST00000411993 PMLP29590 882 aa7.45□□□□□ -1.22
HDAC9-205ENST00000411993 MC3RP41968 323 aa7.45□□□□□ -1.22
HDAC9-205ENST00000411993 RPL11P62913 178 aaKnown RBP7.45□□□□□ -1.22
HDAC9-205ENST00000411993 FOXO4P98177 505 aa7.45□□□□□ -1.22
HDAC9-205ENST00000411993 KCNAB2Q13303 367 aa7.45□□□□□ -1.22
HDAC9-205ENST00000411993 INF2Q27J81 1249 aa7.45□□□□□ -1.22
HDAC9-205ENST00000411993 LCE4AQ5TA78 99 aa7.45□□□□□ -1.22
HDAC9-205ENST00000411993 E4F1Q66K89 784 aaPredicted RBP7.45□□□□□ -1.22
HDAC9-205ENST00000411993 LILRA6Q6PI73 481 aa7.45□□□□□ -1.22
HDAC9-205ENST00000411993 DCP2Q8IU60 420 aaKnown RBP7.45□□□□□ -1.22
HDAC9-205ENST00000411993 MARCH10Q8NA82 808 aaPredicted RBP7.45□□□□□ -1.22
HDAC9-205ENST00000411993 DIO2Q92813 273 aa7.45□□□□□ -1.22
HDAC9-205ENST00000411993 EPN3Q9H201 632 aa7.45□□□□□ -1.22
HDAC9-205ENST00000411993 PMF1-BGLAPU3KQ54 211 aa7.45□□□□□ -1.22
HDAC9-205ENST00000411993 CPP00450 1065 aa7.44□□□□□ -1.22
HDAC9-205ENST00000411993 ATF2P15336 505 aa7.44□□□□□ -1.22
HDAC9-205ENST00000411993 HOXA5P20719 270 aa7.44□□□□□ -1.22
HDAC9-205ENST00000411993 SP8Q8IXZ3 490 aa7.44□□□□□ -1.22
HDAC9-205ENST00000411993 DPF3Q92784 378 aa7.44□□□□□ -1.22
HDAC9-205ENST00000411993 CCDC140Q96MF4 163 aa7.44□□□□□ -1.22
HDAC9-205ENST00000411993 KCNC2Q96PR1 638 aa7.44□□□□□ -1.22
HDAC9-205ENST00000411993 AP5M1Q9H0R1 490 aa7.44□□□□□ -1.22
HDAC9-205ENST00000411993 SIT1Q9Y3P8 196 aa7.44□□□□□ -1.22
HDAC9-205ENST00000411993 TIMM13Q9Y5L4 95 aaPredicted RBP7.44□□□□□ -1.22
HDAC9-205ENST00000411993 C22orf46C9J442 243 aa7.43□□□□□ -1.22
HDAC9-205ENST00000411993 CTSWP56202 376 aa7.43□□□□□ -1.22
HDAC9-205ENST00000411993 CYP4F3Q08477 520 aa7.43□□□□□ -1.22
HDAC9-205ENST00000411993 DDR2Q16832 855 aa7.43□□□□□ -1.22
HDAC9-205ENST00000411993 PRSS53Q2L4Q9 553 aa7.43□□□□□ -1.22
HDAC9-205ENST00000411993 SLC10A6Q3KNW5 377 aa7.43□□□□□ -1.22
HDAC9-205ENST00000411993 PPIL6Q8IXY8 311 aa7.43□□□□□ -1.22
HDAC9-205ENST00000411993 CELF2-AS1Q8N7Q2 184 aa7.43□□□□□ -1.22
HDAC9-205ENST00000411993 LINC01356Q8N9X3 169 aa7.43□□□□□ -1.22
HDAC9-205ENST00000411993 PLEKHO2Q8TD55 490 aa7.43□□□□□ -1.22
HDAC9-205ENST00000411993 GMLQ99445 158 aa7.43□□□□□ -1.22
HDAC9-205ENST00000411993 SCG5P05408 212 aa7.42□□□□□ -1.22
HDAC9-205ENST00000411993 FPR2P25090 351 aa7.42□□□□□ -1.22
HDAC9-205ENST00000411993 GTF2A2P52657 109 aa7.42□□□□□ -1.22
HDAC9-205ENST00000411993 GFRA1P56159 465 aa7.42□□□□□ -1.22
HDAC9-205ENST00000411993 SF1Q15637 639 aaKnown RBP7.42□□□□□ -1.22
HDAC9-205ENST00000411993 ACBD5Q5T8D3 534 aaPredicted RBP7.42□□□□□ -1.22
HDAC9-205ENST00000411993 TMEFF2Q9UIK5 374 aaPredicted RBP7.42□□□□□ -1.22
HDAC9-205ENST00000411993 PLA2G1BP04054 148 aaKnown RBP7.41□□□□□ -1.22
HDAC9-205ENST00000411993 CEP68Q76N32 757 aa7.41□□□□□ -1.22
HDAC9-205ENST00000411993 B3GNT8Q7Z7M8 397 aa7.41□□□□□ -1.22
HDAC9-205ENST00000411993 CCDC103Q8IW40 242 aa7.41□□□□□ -1.22
HDAC9-205ENST00000411993 TMEM145Q8NBT3 493 aa7.41□□□□□ -1.22
HDAC9-205ENST00000411993 SMARCC2Q8TAQ2 1214 aa7.41□□□□□ -1.22
HDAC9-205ENST00000411993 TRMT2BQ96GJ1 504 aaKnown RBP7.41□□□□□ -1.22
HDAC9-205ENST00000411993 IGSF5Q9NSI5 407 aa7.41□□□□□ -1.22
HDAC9-205ENST00000411993 FFAR3O14843 346 aa7.4□□□□□ -1.22
HDAC9-205ENST00000411993 LTBRP36941 435 aa7.4□□□□□ -1.22
HDAC9-205ENST00000411993 BCL6P41182 706 aa7.4□□□□□ -1.22
HDAC9-205ENST00000411993 ZC3H6P61129 1189 aaKnown RBP7.4□□□□□ -1.22
HDAC9-205ENST00000411993 PPP2R2AP63151 447 aa7.4□□□□□ -1.22
HDAC9-205ENST00000411993 CAP1Q01518 475 aa7.4□□□□□ -1.22
HDAC9-205ENST00000411993 MROH9Q5TGP6 573 aa7.4□□□□□ -1.22
HDAC9-205ENST00000411993 KREMEN2Q8NCW0 462 aa7.4□□□□□ -1.22
HDAC9-205ENST00000411993 FEZF2Q8TBJ5 459 aa7.4□□□□□ -1.22
HDAC9-205ENST00000411993 FNIP1Q8TF40 1166 aa7.4□□□□□ -1.22
HDAC9-205ENST00000411993 CPA5Q8WXQ8 436 aa7.4□□□□□ -1.22
HDAC9-205ENST00000411993 SEC14L1Q92503 715 aa7.4□□□□□ -1.22
HDAC9-205ENST00000411993 TMEM169Q96HH4 297 aa7.4□□□□□ -1.22
HDAC9-205ENST00000411993 CHAMP1Q96JM3 812 aa7.4□□□□□ -1.22
HDAC9-205ENST00000411993 TRIM55Q9BYV6 548 aa7.4□□□□□ -1.22
HDAC9-205ENST00000411993 LUC7LQ9NQ29 371 aaKnown RBP7.4□□□□□ -1.22
HDAC9-205ENST00000411993 COA3Q9Y2R0 106 aaPredicted RBP7.4□□□□□ -1.22
HDAC9-205ENST00000411993 KLF4O43474 513 aa7.39□□□□□ -1.23
HDAC9-205ENST00000411993 CACNB2Q08289 660 aaPredicted RBP7.39□□□□□ -1.23
HDAC9-205ENST00000411993 RIOX2Q8IUF8 465 aa7.39□□□□□ -1.23
HDAC9-205ENST00000411993 RCBTB1Q8NDN9 531 aa7.39□□□□□ -1.23
HDAC9-205ENST00000411993 KCTD13Q8WZ19 329 aa7.39□□□□□ -1.23
HDAC9-205ENST00000411993 PCDHA2Q9Y5H9 948 aa7.39□□□□□ -1.23
HDAC9-205ENST00000411993 A0A1W2PQU0 124 aa7.38□□□□□ -1.23
HDAC9-205ENST00000411993 IQCA1LA6NCM1 817 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms