RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 PDE1AP54750 535 aa16.74■□□□□ 0.27
HLA-DQB2-229ENST00000411527 CHMP4BP1P59074 171 aa16.74■□□□□ 0.27
HLA-DQB2-229ENST00000411527 MFSD6Q6ZSS7 791 aa16.74■□□□□ 0.27
HLA-DQB2-229ENST00000411527 FTOQ9C0B1 505 aaKnown RBP eCLIP16.74■□□□□ 0.27
HLA-DQB2-229ENST00000411527 CERS4Q9HA82 394 aa16.74■□□□□ 0.27
HLA-DQB2-229ENST00000411527 MUC3AQ02505 3323 aa16.73■□□□□ 0.27
HLA-DQB2-229ENST00000411527 WDR19Q8NEZ3 1342 aa16.73■□□□□ 0.27
HLA-DQB2-229ENST00000411527 TRIP12Q14669 1992 aaPredicted RBP16.73■□□□□ 0.27
HLA-DQB2-229ENST00000411527 PITPNM1O00562 1244 aa16.73■□□□□ 0.27
HLA-DQB2-229ENST00000411527 IQCF3P0C7M6 154 aa16.73■□□□□ 0.27
HLA-DQB2-229ENST00000411527 PTPN11Q06124 597 aaPredicted RBP16.73■□□□□ 0.27
HLA-DQB2-229ENST00000411527 SKIV2LQ15477 1246 aaKnown RBP16.73■□□□□ 0.27
HLA-DQB2-229ENST00000411527 USH1GQ495M9 461 aa16.73■□□□□ 0.27
HLA-DQB2-229ENST00000411527 SLC9A7Q96T83 725 aa16.73■□□□□ 0.27
HLA-DQB2-229ENST00000411527 NOD1Q9Y239 953 aa16.73■□□□□ 0.27
HLA-DQB2-229ENST00000411527 CHD7Q9P2D1 2997 aa16.73■□□□□ 0.27
HLA-DQB2-229ENST00000411527 GTPBP6O43824 516 aaPredicted RBP16.72■□□□□ 0.27
HLA-DQB2-229ENST00000411527 GOLGA8HP0CJ92 632 aa16.72■□□□□ 0.27
HLA-DQB2-229ENST00000411527 SNHG28P0DPA3 235 aa16.72■□□□□ 0.27
HLA-DQB2-229ENST00000411527 BMP1P13497 986 aa16.72■□□□□ 0.27
HLA-DQB2-229ENST00000411527 TFF2Q03403 129 aa16.72■□□□□ 0.27
HLA-DQB2-229ENST00000411527 NMIQ13287 307 aaPredicted RBP16.72■□□□□ 0.27
HLA-DQB2-229ENST00000411527 BFSP2Q13515 415 aa16.72■□□□□ 0.27
HLA-DQB2-229ENST00000411527 ZNF589Q86UQ0 364 aaPredicted RBP16.72■□□□□ 0.27
HLA-DQB2-229ENST00000411527 PHOSPHO2Q8TCD6 241 aa16.72■□□□□ 0.27
HLA-DQB2-229ENST00000411527 MTCH2Q9Y6C9 303 aa16.72■□□□□ 0.27
HLA-DQB2-229ENST00000411527 ZMYM6O95789 1325 aa16.71■□□□□ 0.27
HLA-DQB2-229ENST00000411527 TANC1Q9C0D5 1861 aa16.71■□□□□ 0.27
HLA-DQB2-229ENST00000411527 KIF28PB7ZC32 967 aa16.71■□□□□ 0.27
HLA-DQB2-229ENST00000411527 ARIH2O95376 493 aa16.71■□□□□ 0.27
HLA-DQB2-229ENST00000411527 POU3F3P20264 500 aaPredicted RBP16.71■□□□□ 0.27
HLA-DQB2-229ENST00000411527 AAK1Q2M2I8 961 aa16.71■□□□□ 0.27
HLA-DQB2-229ENST00000411527 HERC6Q8IVU3 1022 aa16.71■□□□□ 0.27
HLA-DQB2-229ENST00000411527 RGS22Q8NE09 1264 aa16.71■□□□□ 0.27
HLA-DQB2-229ENST00000411527 TET1Q8NFU7 2136 aa16.71■□□□□ 0.27
HLA-DQB2-229ENST00000411527 NECAB3Q96P71 396 aaPredicted RBP16.71■□□□□ 0.27
HLA-DQB2-229ENST00000411527 ZKSCAN3Q9BRR0 538 aa16.71■□□□□ 0.27
HLA-DQB2-229ENST00000411527 UBA5Q9GZZ9 404 aa16.71■□□□□ 0.27
HLA-DQB2-229ENST00000411527 CPVLQ9H3G5 476 aa16.71■□□□□ 0.27
HLA-DQB2-229ENST00000411527 RAPGEFL1Q9UHV5 662 aa16.71■□□□□ 0.27
HLA-DQB2-229ENST00000411527 PRRC2BQ5JSZ5 2229 aaKnown RBP16.7■□□□□ 0.26
HLA-DQB2-229ENST00000411527 EPOPA6NHQ4 379 aa16.7■□□□□ 0.26
HLA-DQB2-229ENST00000411527 TRIM6-TRIM34B2RNG4 842 aa16.7■□□□□ 0.26
HLA-DQB2-229ENST00000411527 PCP11498 1178 aaKnown RBP16.7■□□□□ 0.26
HLA-DQB2-229ENST00000411527 KCNQ1P51787 676 aa16.7■□□□□ 0.26
HLA-DQB2-229ENST00000411527 TAP1Q03518 808 aa16.7■□□□□ 0.26
HLA-DQB2-229ENST00000411527 PTGISQ16647 500 aa16.7■□□□□ 0.26
HLA-DQB2-229ENST00000411527 GPATCH4Q5T3I0 446 aaKnown RBP16.7■□□□□ 0.26
HLA-DQB2-229ENST00000411527 SEPT14Q6ZU15 432 aa16.7■□□□□ 0.26
HLA-DQB2-229ENST00000411527 TICAM2Q86XR7 235 aa16.7■□□□□ 0.26
HLA-DQB2-229ENST00000411527 TBC1D10CQ8IV04 446 aa16.7■□□□□ 0.26
HLA-DQB2-229ENST00000411527 AFG1LQ8WV93 481 aa16.7■□□□□ 0.26
HLA-DQB2-229ENST00000411527 ARNTL2Q8WYA1 636 aa16.7■□□□□ 0.26
HLA-DQB2-229ENST00000411527 TBC1D5Q92609 795 aa16.7■□□□□ 0.26
HLA-DQB2-229ENST00000411527 RNF41Q9H4P4 317 aaPredicted RBP16.7■□□□□ 0.26
HLA-DQB2-229ENST00000411527 CCDC171Q6TFL3 1326 aa16.7■□□□□ 0.26
HLA-DQB2-229ENST00000411527 ARHGEF15O94989 841 aa16.69■□□□□ 0.26
HLA-DQB2-229ENST00000411527 LY6KQ17RY6 165 aa16.69■□□□□ 0.26
HLA-DQB2-229ENST00000411527 KRT40Q6A162 431 aa16.69■□□□□ 0.26
HLA-DQB2-229ENST00000411527 CCDC62Q6P9F0 684 aa16.69■□□□□ 0.26
HLA-DQB2-229ENST00000411527 CHST3Q7LGC8 479 aa16.69■□□□□ 0.26
HLA-DQB2-229ENST00000411527 CCDC155Q8N6L0 562 aa16.69■□□□□ 0.26
HLA-DQB2-229ENST00000411527 ESR2Q92731 530 aa16.69■□□□□ 0.26
HLA-DQB2-229ENST00000411527 RILPL2Q969X0 211 aa16.69■□□□□ 0.26
HLA-DQB2-229ENST00000411527 TAAR1Q96RJ0 339 aa16.69■□□□□ 0.26
HLA-DQB2-229ENST00000411527 KIAA1217Q5T5P2 1943 aa16.68■□□□□ 0.26
HLA-DQB2-229ENST00000411527 REV3LO60673 3130 aa16.68■□□□□ 0.26
HLA-DQB2-229ENST00000411527 BAIAP3O94812 1187 aa16.68■□□□□ 0.26
HLA-DQB2-229ENST00000411527 GH1P01241 217 aa16.68■□□□□ 0.26
HLA-DQB2-229ENST00000411527 KCNJ6P48051 423 aa16.68■□□□□ 0.26
HLA-DQB2-229ENST00000411527 CDC37Q16543 378 aaPredicted RBP16.68■□□□□ 0.26
HLA-DQB2-229ENST00000411527 DGKHQ86XP1 1220 aa16.68■□□□□ 0.26
HLA-DQB2-229ENST00000411527 NSUN6Q8TEA1 469 aaKnown RBP16.68■□□□□ 0.26
HLA-DQB2-229ENST00000411527 MYH6P13533 1939 aa16.68■□□□□ 0.26
HLA-DQB2-229ENST00000411527 PTPRSQ13332 1948 aa16.68■□□□□ 0.26
HLA-DQB2-229ENST00000411527 NCOR1O75376 2440 aa16.68■□□□□ 0.26
HLA-DQB2-229ENST00000411527 ABCB11O95342 1321 aa16.68■□□□□ 0.26
HLA-DQB2-229ENST00000411527 NEDD4P46934 1319 aa16.68■□□□□ 0.26
HLA-DQB2-229ENST00000411527 ZNF213O14771 459 aa16.67■□□□□ 0.26
HLA-DQB2-229ENST00000411527 TLL1O43897 1013 aa16.67■□□□□ 0.26
HLA-DQB2-229ENST00000411527 MMP3P08254 477 aa16.67■□□□□ 0.26
HLA-DQB2-229ENST00000411527 CASTP20810 708 aaKnown RBP16.67■□□□□ 0.26
HLA-DQB2-229ENST00000411527 MFAP1P55081 439 aaKnown RBP16.67■□□□□ 0.26
HLA-DQB2-229ENST00000411527 RRP1P56182 461 aaKnown RBP16.67■□□□□ 0.26
HLA-DQB2-229ENST00000411527 ARHGAP1Q07960 439 aa16.67■□□□□ 0.26
HLA-DQB2-229ENST00000411527 STXBP2Q15833 593 aa16.67■□□□□ 0.26
HLA-DQB2-229ENST00000411527 GDF6Q6KF10 455 aaPredicted RBP16.67■□□□□ 0.26
HLA-DQB2-229ENST00000411527 ADGRF4Q8IZF3 695 aa16.67■□□□□ 0.26
HLA-DQB2-229ENST00000411527 PNMA1Q8ND90 353 aa16.67■□□□□ 0.26
HLA-DQB2-229ENST00000411527 CAGE1Q8TC20 777 aa16.67■□□□□ 0.26
HLA-DQB2-229ENST00000411527 SYTL5Q8TDW5 730 aaPredicted RBP16.67■□□□□ 0.26
HLA-DQB2-229ENST00000411527 AFAP1L1Q8TED9 768 aa16.67■□□□□ 0.26
HLA-DQB2-229ENST00000411527 CRBNQ96SW2 442 aa16.67■□□□□ 0.26
HLA-DQB2-229ENST00000411527 MAF1Q9H063 256 aa16.67■□□□□ 0.26
HLA-DQB2-229ENST00000411527 COL20A1Q9P218 1284 aa16.67■□□□□ 0.26
HLA-DQB2-229ENST00000411527 MYH7BA7E2Y1 1941 aa16.66■□□□□ 0.26
HLA-DQB2-229ENST00000411527 KDM4AO75164 1064 aa16.66■□□□□ 0.26
HLA-DQB2-229ENST00000411527 SELPP16109 830 aa16.66■□□□□ 0.26
HLA-DQB2-229ENST00000411527 GRB10Q13322 594 aa16.66■□□□□ 0.26
HLA-DQB2-229ENST00000411527 HDAC1Q13547 482 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms