RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 ETFBP38117 255 aa3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 ZNF143P52747 638 aaPredicted RBP3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 CYP4F3Q08477 520 aa3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 NFIXQ14938 502 aa3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 INF2Q27J81 1249 aa3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 WWC2Q6AWC2 1192 aa3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 POMZP3Q6PJE2 187 aa3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 TRIM59Q8IWR1 403 aa3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 SP8Q8IXZ3 490 aa3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 PLEKHO2Q8TD55 490 aa3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 MICAL1Q8TDZ2 1067 aa3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 ZNF526Q8TF50 670 aaPredicted RBP3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 FRS2Q8WU20 508 aa3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 TSPAN17Q96FV3 270 aa3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 PEX11GQ96HA9 241 aa3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 RNF38Q9H0F5 515 aa3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 ADAM7Q9H2U9 754 aa3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 CYP26B1Q9NR63 512 aa3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 BTG4Q9NY30 223 aa3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 ACTR10Q9NZ32 417 aa3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 JAG2Q9Y219 1238 aa3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 PMF1-BGLAPU3KQ54 211 aa3.35□□□□□ -1.87
RNU2-54P-201ENST00000410299 ARNTLO00327 626 aa3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 DDAH1O94760 285 aa3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 NAT2P11245 290 aa3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 TCF3P15923 654 aa3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 SLURP1P55000 103 aa3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 HTRA3P83110 453 aa3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 SF1Q15637 639 aaKnown RBP3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 SV2CQ496J9 727 aa3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 VWA3BQ502W6 1294 aa3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 B3GNT8Q7Z7M8 397 aa3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 VPS37DQ86XT2 251 aa3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 CCDC103Q8IW40 242 aa3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 TEX2Q8IWB9 1127 aa3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 FAM178BQ8IXR5 827 aa3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 NLGN1Q8N2Q7 840 aa3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 CRACR2BQ8N4Y2 399 aaPredicted RBP3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 NETO2Q8NC67 525 aa3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 SMARCC2Q8TAQ2 1214 aa3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 NPLOC4Q8TAT6 608 aa3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 BTN2A2Q8WVV5 523 aa3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 NOX5Q96PH1 765 aa3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 MMP19Q99542 508 aa3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 SYT3Q9BQG1 590 aa3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 NKX2-4Q9H2Z4 354 aa3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 LUC7LQ9NQ29 371 aaKnown RBP3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 RTEL1Q9NZ71 1219 aa3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 MARCH2Q9P0N8 246 aa3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 TMEFF2Q9UIK5 374 aaPredicted RBP3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 NUDT5Q9UKK9 219 aa3.34□□□□□ -1.87
RNU2-54P-201ENST00000410299 C22orf46C9J442 243 aa3.33□□□□□ -1.88
RNU2-54P-201ENST00000410299 SUSD5O60279 629 aa3.33□□□□□ -1.88
RNU2-54P-201ENST00000410299 FPR2P25090 351 aa3.33□□□□□ -1.88
RNU2-54P-201ENST00000410299 ECI1P42126 302 aa3.33□□□□□ -1.88
RNU2-54P-201ENST00000410299 KCNC1P48547 511 aa3.33□□□□□ -1.88
RNU2-54P-201ENST00000410299 CAP1Q01518 475 aa3.33□□□□□ -1.88
RNU2-54P-201ENST00000410299 DLX2Q07687 328 aaPredicted RBP3.33□□□□□ -1.88
RNU2-54P-201ENST00000410299 CACNB2Q08289 660 aaPredicted RBP3.33□□□□□ -1.88
RNU2-54P-201ENST00000410299 SLC9A5Q14940 896 aa3.33□□□□□ -1.88
RNU2-54P-201ENST00000410299 PRSS53Q2L4Q9 553 aa3.33□□□□□ -1.88
RNU2-54P-201ENST00000410299 TNNI3KQ59H18 835 aa3.33□□□□□ -1.88
RNU2-54P-201ENST00000410299 MRM1Q6IN84 353 aaKnown RBP3.33□□□□□ -1.88
RNU2-54P-201ENST00000410299 LIPIQ6XZB0 460 aa3.33□□□□□ -1.88
RNU2-54P-201ENST00000410299 SAPCD2Q86UD0 394 aa3.33□□□□□ -1.88
RNU2-54P-201ENST00000410299 ZNF227Q86WZ6 799 aa3.33□□□□□ -1.88
RNU2-54P-201ENST00000410299 DDX11Q96FC9 970 aa3.33□□□□□ -1.88
RNU2-54P-201ENST00000410299 SPATA25Q9BR10 227 aa3.33□□□□□ -1.88
RNU2-54P-201ENST00000410299 LRP2BPQ9P2M1 347 aa3.33□□□□□ -1.88
RNU2-54P-201ENST00000410299 PRKAG3Q9UGI9 489 aa3.33□□□□□ -1.88
RNU2-54P-201ENST00000410299 SGSM2O43147 1006 aa3.32□□□□□ -1.88
RNU2-54P-201ENST00000410299 ZBTB7AO95365 584 aa3.32□□□□□ -1.88
RNU2-54P-201ENST00000410299 SNRPB2P08579 225 aaKnown RBP3.32□□□□□ -1.88
RNU2-54P-201ENST00000410299 FGRP09769 529 aa3.32□□□□□ -1.88
RNU2-54P-201ENST00000410299 SYN1P17600 705 aa3.32□□□□□ -1.88
RNU2-54P-201ENST00000410299 BCL6P41182 706 aa3.32□□□□□ -1.88
RNU2-54P-201ENST00000410299 SMAD4Q13485 552 aaKnown RBP3.32□□□□□ -1.88
RNU2-54P-201ENST00000410299 GNL2Q13823 731 aaKnown RBP3.32□□□□□ -1.88
RNU2-54P-201ENST00000410299 FXNQ16595 210 aa3.32□□□□□ -1.88
RNU2-54P-201ENST00000410299 DENND5AQ6IQ26 1287 aa3.32□□□□□ -1.88
RNU2-54P-201ENST00000410299 MCF2L2Q86YR7 1114 aa3.32□□□□□ -1.88
RNU2-54P-201ENST00000410299 FAM26EQ8N5C1 309 aa3.32□□□□□ -1.88
RNU2-54P-201ENST00000410299 KREMEN2Q8NCW0 462 aa3.32□□□□□ -1.88
RNU2-54P-201ENST00000410299 CXorf38Q8TB03 319 aa3.32□□□□□ -1.88
RNU2-54P-201ENST00000410299 CPA5Q8WXQ8 436 aa3.32□□□□□ -1.88
RNU2-54P-201ENST00000410299 ZBTB8AQ96BR9 441 aa3.32□□□□□ -1.88
RNU2-54P-201ENST00000410299 TINF2Q9BSI4 451 aa3.32□□□□□ -1.88
RNU2-54P-201ENST00000410299 ZNF408Q9H9D4 720 aa3.32□□□□□ -1.88
RNU2-54P-201ENST00000410299 SPATA6Q9NWH7 488 aaPredicted RBP3.32□□□□□ -1.88
RNU2-54P-201ENST00000410299 FBXL7Q9UJT9 491 aa3.32□□□□□ -1.88
RNU2-54P-201ENST00000410299 CCDC9Q9Y3X0 531 aaKnown RBP3.32□□□□□ -1.88
RNU2-54P-201ENST00000410299 SH3D21A4FU49 640 aa3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 MEFVO15553 781 aaPredicted RBP3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 PRICKLE3O43900 615 aaPredicted RBP3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 GJB6O95452 261 aa3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 C8BP07358 591 aa3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 LCP1P13796 627 aa3.31□□□□□ -1.88
RNU2-54P-201ENST00000410299 HOXC12P31275 282 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms