RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 JAKMIP3Q5VZ66 844 aa17.41■□□□□ 0.38
LSM5-207ENST00000410044 KRT25Q7Z3Z0 450 aa17.41■□□□□ 0.38
LSM5-207ENST00000410044 DPP9Q86TI2 863 aa17.41■□□□□ 0.38
LSM5-207ENST00000410044 MORC4Q8TE76 937 aa17.41■□□□□ 0.38
LSM5-207ENST00000410044 IWS1Q96ST2 819 aa17.41■□□□□ 0.38
LSM5-207ENST00000410044 TMEM260Q9NX78 707 aa17.41■□□□□ 0.38
LSM5-207ENST00000410044 CEP350Q5VT06 3117 aa17.41■□□□□ 0.38
LSM5-207ENST00000410044 SPDYE3A6NKU9 549 aa17.4■□□□□ 0.38
LSM5-207ENST00000410044 PGK2P07205 417 aa17.4■□□□□ 0.38
LSM5-207ENST00000410044 RGS2P41220 211 aa17.4■□□□□ 0.38
LSM5-207ENST00000410044 CTCFP49711 727 aaPredicted RBP17.4■□□□□ 0.38
LSM5-207ENST00000410044 NR5A1Q13285 461 aa17.4■□□□□ 0.38
LSM5-207ENST00000410044 IRF5Q13568 498 aa17.4■□□□□ 0.38
LSM5-207ENST00000410044 MAMDC4Q6UXC1 1216 aa17.4■□□□□ 0.38
LSM5-207ENST00000410044 FCHSD1Q86WN1 690 aa17.4■□□□□ 0.38
LSM5-207ENST00000410044 MSL3Q8N5Y2 521 aaKnown RBP17.4■□□□□ 0.38
LSM5-207ENST00000410044 RASGRP4Q8TDF6 673 aa17.4■□□□□ 0.38
LSM5-207ENST00000410044 NSUN6Q8TEA1 469 aaKnown RBP17.4■□□□□ 0.38
LSM5-207ENST00000410044 PURBQ96QR8 312 aaKnown RBP17.4■□□□□ 0.38
LSM5-207ENST00000410044 RMDN3Q96TC7 470 aa17.4■□□□□ 0.38
LSM5-207ENST00000410044 ANO3Q9BYT9 981 aa17.4■□□□□ 0.38
LSM5-207ENST00000410044 PXMP2Q9NR77 195 aa17.4■□□□□ 0.38
LSM5-207ENST00000410044 SRRDQ9UH36 339 aa17.4■□□□□ 0.38
LSM5-207ENST00000410044 ASTN1O14525 1302 aa17.4■□□□□ 0.38
LSM5-207ENST00000410044 MYH7BA7E2Y1 1941 aa17.39■□□□□ 0.37
LSM5-207ENST00000410044 CASP8AP2Q9UKL3 1982 aa17.39■□□□□ 0.37
LSM5-207ENST00000410044 CYP3A4P08684 503 aa17.39■□□□□ 0.37
LSM5-207ENST00000410044 EDNRBP24530 442 aa17.39■□□□□ 0.37
LSM5-207ENST00000410044 SREBF1P36956 1147 aa17.39■□□□□ 0.37
LSM5-207ENST00000410044 ALDH5A1P51649 535 aaPredicted RBP17.39■□□□□ 0.37
LSM5-207ENST00000410044 XRRA1Q6P2D8 792 aa17.39■□□□□ 0.37
LSM5-207ENST00000410044 NOSTRINQ8IVI9 506 aa17.39■□□□□ 0.37
LSM5-207ENST00000410044 NPLOC4Q8TAT6 608 aa17.39■□□□□ 0.37
LSM5-207ENST00000410044 ZSCAN16Q9H4T2 348 aaPredicted RBP17.39■□□□□ 0.37
LSM5-207ENST00000410044 EHMT1Q9H9B1 1298 aa17.39■□□□□ 0.37
LSM5-207ENST00000410044 CIZ1Q9ULV3 898 aaPredicted RBP17.39■□□□□ 0.37
LSM5-207ENST00000410044 GABRQQ9UN88 632 aa17.39■□□□□ 0.37
LSM5-207ENST00000410044 CCDC194A0A1B0GVG4 234 aa17.38■□□□□ 0.37
LSM5-207ENST00000410044 VPS37CA5D8V6 355 aaPredicted RBP17.38■□□□□ 0.37
LSM5-207ENST00000410044 ASB14A6NK59 587 aa17.38■□□□□ 0.37
LSM5-207ENST00000410044 B4DLN1 442 aa17.38■□□□□ 0.37
LSM5-207ENST00000410044 KIF28PB7ZC32 967 aa17.38■□□□□ 0.37
LSM5-207ENST00000410044 EDIL3O43854 480 aa17.38■□□□□ 0.37
LSM5-207ENST00000410044 BRD1O95696 1058 aa17.38■□□□□ 0.37
LSM5-207ENST00000410044 ZSCAN22P10073 491 aaPredicted RBP17.38■□□□□ 0.37
LSM5-207ENST00000410044 FLT3LGP49771 235 aa17.38■□□□□ 0.37
LSM5-207ENST00000410044 USP11P51784 963 aa17.38■□□□□ 0.37
LSM5-207ENST00000410044 NUCB2P80303 420 aa17.38■□□□□ 0.37
LSM5-207ENST00000410044 NONOQ15233 471 aaKnown RBP eCLIP17.38■□□□□ 0.37
LSM5-207ENST00000410044 EARS2Q5JPH6 523 aaKnown RBP17.38■□□□□ 0.37
LSM5-207ENST00000410044 ARHGEF16Q5VV41 709 aa17.38■□□□□ 0.37
LSM5-207ENST00000410044 OLFML2BQ68BL8 750 aa17.38■□□□□ 0.37
LSM5-207ENST00000410044 VSIG10LQ86VR7 867 aa17.38■□□□□ 0.37
LSM5-207ENST00000410044 MAML3Q96JK9 1138 aa17.38■□□□□ 0.37
LSM5-207ENST00000410044 PDCD2LQ9BRP1 358 aa17.38■□□□□ 0.37
LSM5-207ENST00000410044 ZDHHC9Q9Y397 364 aa17.38■□□□□ 0.37
LSM5-207ENST00000410044 NR3C2P08235 984 aa17.37■□□□□ 0.37
LSM5-207ENST00000410044 CIITAP33076 1130 aa17.37■□□□□ 0.37
LSM5-207ENST00000410044 RESTQ13127 1097 aa17.37■□□□□ 0.37
LSM5-207ENST00000410044 PKP1Q13835 747 aa17.37■□□□□ 0.37
LSM5-207ENST00000410044 PGM5Q15124 567 aa17.37■□□□□ 0.37
LSM5-207ENST00000410044 PCNX4Q63HM2 1172 aa17.37■□□□□ 0.37
LSM5-207ENST00000410044 MCTP1Q6DN14 999 aa17.37■□□□□ 0.37
LSM5-207ENST00000410044 PIK3AP1Q6ZUJ8 805 aa17.37■□□□□ 0.37
LSM5-207ENST00000410044 OTOP1Q7RTM1 612 aa17.37■□□□□ 0.37
LSM5-207ENST00000410044 BRAPQ7Z569 592 aa17.37■□□□□ 0.37
LSM5-207ENST00000410044 TRMT44Q8IYL2 757 aaKnown RBP17.37■□□□□ 0.37
LSM5-207ENST00000410044 APBA2Q99767 749 aa17.37■□□□□ 0.37
LSM5-207ENST00000410044 STAM2O75886 525 aa17.36■□□□□ 0.37
LSM5-207ENST00000410044 ECM2O94769 699 aaPredicted RBP17.36■□□□□ 0.37
LSM5-207ENST00000410044 CYP2B6P20813 491 aa17.36■□□□□ 0.37
LSM5-207ENST00000410044 TRAPPC10P48553 1259 aa17.36■□□□□ 0.37
LSM5-207ENST00000410044 ARHGAP4P98171 946 aa17.36■□□□□ 0.37
LSM5-207ENST00000410044 PRKCZQ05513 592 aa17.36■□□□□ 0.37
LSM5-207ENST00000410044 MOXD1Q6UVY6 613 aa17.36■□□□□ 0.37
LSM5-207ENST00000410044 TBCKQ8TEA7 893 aa17.36■□□□□ 0.37
LSM5-207ENST00000410044 PGBD1Q96JS3 809 aa17.36■□□□□ 0.37
LSM5-207ENST00000410044 MPHOSPH6Q99547 160 aaKnown RBP17.36■□□□□ 0.37
LSM5-207ENST00000410044 PCNTO95613 3336 aa17.36■□□□□ 0.37
LSM5-207ENST00000410044 CYP3A7-CYP3A51PA0A087WV96 503 aa17.35■□□□□ 0.37
LSM5-207ENST00000410044 F13A1P00488 732 aa17.35■□□□□ 0.37
LSM5-207ENST00000410044 EIF2AK2P19525 551 aaKnown RBP17.35■□□□□ 0.37
LSM5-207ENST00000410044 CYP3A7P24462 503 aa17.35■□□□□ 0.37
LSM5-207ENST00000410044 LBX1P52954 281 aa17.35■□□□□ 0.37
LSM5-207ENST00000410044 MRPS9P82933 396 aaKnown RBP17.35■□□□□ 0.37
LSM5-207ENST00000410044 GNL2Q13823 731 aaKnown RBP17.35■□□□□ 0.37
LSM5-207ENST00000410044 INF2Q27J81 1249 aa17.35■□□□□ 0.37
LSM5-207ENST00000410044 NEK8Q86SG6 692 aa17.35■□□□□ 0.37
LSM5-207ENST00000410044 PXYLP1Q8TE99 480 aa17.35■□□□□ 0.37
LSM5-207ENST00000410044 TINF2Q9BSI4 451 aa17.35■□□□□ 0.37
LSM5-207ENST00000410044 SYNGAP1Q96PV0 1343 aa17.35■□□□□ 0.37
LSM5-207ENST00000410044 MCM3APO60318 1980 aa17.35■□□□□ 0.37
LSM5-207ENST00000410044 FAM205CA6NFA0 338 aa17.34■□□□□ 0.37
LSM5-207ENST00000410044 EIF3JO75822 258 aaKnown RBP17.34■□□□□ 0.37
LSM5-207ENST00000410044 SNAI1O95863 264 aaPredicted RBP17.34■□□□□ 0.37
LSM5-207ENST00000410044 CCND2P30279 289 aa17.34■□□□□ 0.37
LSM5-207ENST00000410044 TOB1P50616 345 aaPredicted RBP17.34■□□□□ 0.37
LSM5-207ENST00000410044 STXBP2Q15833 593 aa17.34■□□□□ 0.37
LSM5-207ENST00000410044 PPP4R3AQ6IN85 833 aa17.34■□□□□ 0.37
LSM5-207ENST00000410044 IL31RAQ8NI17 732 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms