RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 RMDN3Q96TC7 470 aa23.61■■□□□ 1.37
C4orf48-202ENST00000409860 PRDM10Q9NQV6 1147 aa23.61■■□□□ 1.37
C4orf48-202ENST00000409860 RBBP6Q7Z6E9 1792 aaKnown RBP23.6■■□□□ 1.37
C4orf48-202ENST00000409860 SOWAHBA6NEL2 793 aa23.6■■□□□ 1.37
C4orf48-202ENST00000409860 ALDH5A1P51649 535 aaPredicted RBP23.6■■□□□ 1.37
C4orf48-202ENST00000409860 DIS3L2Q8IYB7 885 aaKnown RBP23.6■■□□□ 1.37
C4orf48-202ENST00000409860 TRMT44Q8IYL2 757 aaKnown RBP23.6■■□□□ 1.37
C4orf48-202ENST00000409860 RASGRP4Q8TDF6 673 aa23.6■■□□□ 1.37
C4orf48-202ENST00000409860 MAML3Q96JK9 1138 aa23.6■■□□□ 1.37
C4orf48-202ENST00000409860 ANO3Q9BYT9 981 aa23.6■■□□□ 1.37
C4orf48-202ENST00000409860 TMEM260Q9NX78 707 aa23.6■■□□□ 1.37
C4orf48-202ENST00000409860 PCDHA6Q9UN73 950 aa23.6■■□□□ 1.37
C4orf48-202ENST00000409860 PCDHA8Q9Y5H6 950 aa23.6■■□□□ 1.37
C4orf48-202ENST00000409860 LOC102724159A0A0B4J2E5 919 aa23.59■■□□□ 1.37
C4orf48-202ENST00000409860 ASB14A6NK59 587 aa23.59■■□□□ 1.37
C4orf48-202ENST00000409860 GNL2Q13823 731 aaKnown RBP23.59■■□□□ 1.37
C4orf48-202ENST00000409860 PWP2Q15269 919 aaKnown RBP23.59■■□□□ 1.37
C4orf48-202ENST00000409860 MSL3Q8N5Y2 521 aaKnown RBP23.59■■□□□ 1.37
C4orf48-202ENST00000409860 FGD4Q96M96 766 aa23.59■■□□□ 1.37
C4orf48-202ENST00000409860 PXMP2Q9NR77 195 aa23.59■■□□□ 1.37
C4orf48-202ENST00000409860 EIF2AK2P19525 551 aaKnown RBP23.58■■□□□ 1.37
C4orf48-202ENST00000409860 OLFML2BQ68BL8 750 aa23.58■■□□□ 1.37
C4orf48-202ENST00000409860 KRT25Q7Z3Z0 450 aa23.58■■□□□ 1.37
C4orf48-202ENST00000409860 OXER1Q8TDS5 423 aa23.58■■□□□ 1.37
C4orf48-202ENST00000409860 CCDC194A0A1B0GVG4 234 aa23.57■■□□□ 1.36
C4orf48-202ENST00000409860 VPS37CA5D8V6 355 aaPredicted RBP23.57■■□□□ 1.36
C4orf48-202ENST00000409860 M0R2N6 131 aa23.57■■□□□ 1.36
C4orf48-202ENST00000409860 ADAMTS3O15072 1205 aa23.57■■□□□ 1.36
C4orf48-202ENST00000409860 PDIA4P13667 645 aaKnown RBP23.57■■□□□ 1.36
C4orf48-202ENST00000409860 SYT1P21579 422 aa23.57■■□□□ 1.36
C4orf48-202ENST00000409860 PGBD1Q96JS3 809 aa23.57■■□□□ 1.36
C4orf48-202ENST00000409860 IWS1Q96ST2 819 aa23.57■■□□□ 1.36
C4orf48-202ENST00000409860 FOXP1Q9H334 677 aaPredicted RBP23.57■■□□□ 1.36
C4orf48-202ENST00000409860 PTPN22Q9Y2R2 807 aa23.57■■□□□ 1.36
C4orf48-202ENST00000409860 PTCH2Q9Y6C5 1203 aa23.57■■□□□ 1.36
C4orf48-202ENST00000409860 ASTN1O14525 1302 aa23.57■■□□□ 1.36
C4orf48-202ENST00000409860 FRMPD4Q14CM0 1322 aa23.57■■□□□ 1.36
C4orf48-202ENST00000409860 RPTORQ8N122 1335 aa23.57■■□□□ 1.36
C4orf48-202ENST00000409860 BTBD18B2RXH4 712 aa23.56■■□□□ 1.36
C4orf48-202ENST00000409860 ADCY3O60266 1144 aa23.56■■□□□ 1.36
C4orf48-202ENST00000409860 NR5A1Q13285 461 aa23.56■■□□□ 1.36
C4orf48-202ENST00000409860 CCL14Q16627 93 aa23.56■■□□□ 1.36
C4orf48-202ENST00000409860 MCTP1Q6DN14 999 aa23.56■■□□□ 1.36
C4orf48-202ENST00000409860 SLAIN1Q8ND83 568 aa23.56■■□□□ 1.36
C4orf48-202ENST00000409860 PDCD2LQ9BRP1 358 aa23.56■■□□□ 1.36
C4orf48-202ENST00000409860 TINF2Q9BSI4 451 aa23.56■■□□□ 1.36
C4orf48-202ENST00000409860 SYNGAP1Q96PV0 1343 aa23.56■■□□□ 1.36
C4orf48-202ENST00000409860 CASP8AP2Q9UKL3 1982 aa23.55■■□□□ 1.36
C4orf48-202ENST00000409860 STX6O43752 255 aa23.55■■□□□ 1.36
C4orf48-202ENST00000409860 PDE4DQ08499 809 aa23.55■■□□□ 1.36
C4orf48-202ENST00000409860 PGM5Q15124 567 aa23.55■■□□□ 1.36
C4orf48-202ENST00000409860 NONOQ15233 471 aaKnown RBP eCLIP23.55■■□□□ 1.36
C4orf48-202ENST00000409860 PKN2Q16513 984 aaKnown RBP23.55■■□□□ 1.36
C4orf48-202ENST00000409860 MFSD14CQ5VZR4 134 aa23.55■■□□□ 1.36
C4orf48-202ENST00000409860 MAMDC4Q6UXC1 1216 aa23.55■■□□□ 1.36
C4orf48-202ENST00000409860 ARMCX2Q7L311 632 aa23.55■■□□□ 1.36
C4orf48-202ENST00000409860 PXYLP1Q8TE99 480 aa23.55■■□□□ 1.36
C4orf48-202ENST00000409860 DOCK3Q8IZD9 2030 aa23.55■■□□□ 1.36
C4orf48-202ENST00000409860 NR3C2P08235 984 aa23.54■■□□□ 1.36
C4orf48-202ENST00000409860 EDNRBP24530 442 aa23.54■■□□□ 1.36
C4orf48-202ENST00000409860 CCND2P30279 289 aa23.54■■□□□ 1.36
C4orf48-202ENST00000409860 SREBF1P36956 1147 aa23.54■■□□□ 1.36
C4orf48-202ENST00000409860 UBXN2AP68543 259 aa23.54■■□□□ 1.36
C4orf48-202ENST00000409860 XRRA1Q6P2D8 792 aa23.54■■□□□ 1.36
C4orf48-202ENST00000409860 PIK3AP1Q6ZUJ8 805 aa23.54■■□□□ 1.36
C4orf48-202ENST00000409860 MORC4Q8TE76 937 aa23.54■■□□□ 1.36
C4orf48-202ENST00000409860 TRIB2Q92519 343 aa23.54■■□□□ 1.36
C4orf48-202ENST00000409860 TNFRSF25Q93038 417 aa23.54■■□□□ 1.36
C4orf48-202ENST00000409860 FLRT1Q9NZU1 646 aa23.54■■□□□ 1.36
C4orf48-202ENST00000409860 HMGCRP04035 888 aa23.53■■□□□ 1.36
C4orf48-202ENST00000409860 MYCLP12524 364 aaPredicted RBP23.53■■□□□ 1.36
C4orf48-202ENST00000409860 ELNP15502 786 aa23.53■■□□□ 1.36
C4orf48-202ENST00000409860 STXBP2Q15833 593 aa23.53■■□□□ 1.36
C4orf48-202ENST00000409860 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.53■■□□□ 1.36
C4orf48-202ENST00000409860 GRK4P32298 578 aa23.52■■□□□ 1.36
C4orf48-202ENST00000409860 ARHGAP4P98171 946 aa23.52■■□□□ 1.36
C4orf48-202ENST00000409860 PCNX4Q63HM2 1172 aa23.52■■□□□ 1.36
C4orf48-202ENST00000409860 FBXO46Q6PJ61 603 aaPredicted RBP23.52■■□□□ 1.36
C4orf48-202ENST00000409860 NOSTRINQ8IVI9 506 aa23.52■■□□□ 1.36
C4orf48-202ENST00000409860 IL31RAQ8NI17 732 aa23.52■■□□□ 1.36
C4orf48-202ENST00000409860 TBCKQ8TEA7 893 aa23.52■■□□□ 1.36
C4orf48-202ENST00000409860 MTMR6Q9Y217 621 aa23.52■■□□□ 1.36
C4orf48-202ENST00000409860 CNPY2Q9Y2B0 182 aa23.52■■□□□ 1.36
C4orf48-202ENST00000409860 ZNFX1Q9P2E3 1918 aaKnown RBP23.51■■□□□ 1.35
C4orf48-202ENST00000409860 KIF28PB7ZC32 967 aa23.51■■□□□ 1.35
C4orf48-202ENST00000409860 U2AF2P26368 475 aaKnown RBP eCLIP23.51■■□□□ 1.35
C4orf48-202ENST00000409860 CYP2C19P33261 490 aa23.51■■□□□ 1.35
C4orf48-202ENST00000409860 VSIG10LQ86VR7 867 aa23.51■■□□□ 1.35
C4orf48-202ENST00000409860 LCTP09848 1927 aa23.51■■□□□ 1.35
C4orf48-202ENST00000409860 EIF3JO75822 258 aaKnown RBP23.5■■□□□ 1.35
C4orf48-202ENST00000409860 STAM2O75886 525 aa23.5■■□□□ 1.35
C4orf48-202ENST00000409860 SNAI1O95863 264 aaPredicted RBP23.5■■□□□ 1.35
C4orf48-202ENST00000409860 IGHA2P01877 340 aa23.5■■□□□ 1.35
C4orf48-202ENST00000409860 INF2Q27J81 1249 aa23.5■■□□□ 1.35
C4orf48-202ENST00000409860 IPO9Q96P70 1041 aaKnown RBP23.5■■□□□ 1.35
C4orf48-202ENST00000409860 VTA1Q9NP79 307 aa23.5■■□□□ 1.35
C4orf48-202ENST00000409860 NRBP1Q9UHY1 535 aa23.5■■□□□ 1.35
C4orf48-202ENST00000409860 DDX49Q9Y6V7 483 aaKnown RBP23.5■■□□□ 1.35
C4orf48-202ENST00000409860 CYP3A4P08684 503 aa23.49■■□□□ 1.35
C4orf48-202ENST00000409860 ZNF76P36508 570 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms