RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 RPS12P25398 132 aaKnown RBP22.2■■□□□ 1.14
LIMS2-207ENST00000409808 CALML3P27482 149 aa22.2■■□□□ 1.14
LIMS2-207ENST00000409808 SEMA3FQ13275 785 aa22.2■■□□□ 1.14
LIMS2-207ENST00000409808 RAD9BQ6WBX8 426 aa22.2■■□□□ 1.14
LIMS2-207ENST00000409808 ADGRF4Q8IZF3 695 aa22.2■■□□□ 1.14
LIMS2-207ENST00000409808 UBXN6Q9BZV1 441 aa22.2■■□□□ 1.14
LIMS2-207ENST00000409808 PGAP2Q9UHJ9 254 aa22.2■■□□□ 1.14
LIMS2-207ENST00000409808 SMARCA1P28370 1054 aa22.19■■□□□ 1.14
LIMS2-207ENST00000409808 TXLNAP40222 546 aa22.19■■□□□ 1.14
LIMS2-207ENST00000409808 NAPAP54920 295 aa22.19■■□□□ 1.14
LIMS2-207ENST00000409808 KARSQ15046 597 aaKnown RBP22.19■■□□□ 1.14
LIMS2-207ENST00000409808 BRD3Q15059 726 aa22.19■■□□□ 1.14
LIMS2-207ENST00000409808 FAM83AQ86UY5 434 aa22.19■■□□□ 1.14
LIMS2-207ENST00000409808 JMJD4Q9H9V9 463 aa22.19■■□□□ 1.14
LIMS2-207ENST00000409808 A0A1W2PRG0 241 aa22.19■■□□□ 1.14
LIMS2-207ENST00000409808 RASA3Q14644 834 aa22.19■■□□□ 1.14
LIMS2-207ENST00000409808 SLFN13Q68D06 897 aa22.19■■□□□ 1.14
LIMS2-207ENST00000409808 PDXDC2PQ6P474 469 aa22.19■■□□□ 1.14
LIMS2-207ENST00000409808 SRGAP1Q7Z6B7 1085 aa22.19■■□□□ 1.14
LIMS2-207ENST00000409808 COA7Q96BR5 231 aa22.19■■□□□ 1.14
LIMS2-207ENST00000409808 NUP88Q99567 741 aaPredicted RBP22.19■■□□□ 1.14
LIMS2-207ENST00000409808 LONP1P36776 959 aaKnown RBP22.18■■□□□ 1.14
LIMS2-207ENST00000409808 MTF1Q14872 753 aa22.18■■□□□ 1.14
LIMS2-207ENST00000409808 PARD6BQ9BYG5 372 aa22.18■■□□□ 1.14
LIMS2-207ENST00000409808 MYO1AQ9UBC5 1043 aa22.18■■□□□ 1.14
LIMS2-207ENST00000409808 CDC23Q9UJX2 597 aa22.18■■□□□ 1.14
LIMS2-207ENST00000409808 M0R2N6 131 aa22.18■■□□□ 1.14
LIMS2-207ENST00000409808 ZNF658Q5TYW1 1059 aaPredicted RBP22.18■■□□□ 1.14
LIMS2-207ENST00000409808 RRAGBQ5VZM2 374 aa22.18■■□□□ 1.14
LIMS2-207ENST00000409808 PCDHA6Q9UN73 950 aa22.18■■□□□ 1.14
LIMS2-207ENST00000409808 CTNND2Q9UQB3 1225 aa22.18■■□□□ 1.14
LIMS2-207ENST00000409808 PCDHA8Q9Y5H6 950 aa22.18■■□□□ 1.14
LIMS2-207ENST00000409808 USP17L10C9JJH3 530 aa22.17■■□□□ 1.14
LIMS2-207ENST00000409808 F5H6K3 240 aa22.17■■□□□ 1.14
LIMS2-207ENST00000409808 CASP14P31944 242 aa22.17■■□□□ 1.14
LIMS2-207ENST00000409808 SLC1A4P43007 532 aa22.17■■□□□ 1.14
LIMS2-207ENST00000409808 KLRC3Q07444 240 aa22.17■■□□□ 1.14
LIMS2-207ENST00000409808 PAK1Q13153 545 aa22.17■■□□□ 1.14
LIMS2-207ENST00000409808 CCDC148Q8NFR7 591 aa22.17■■□□□ 1.14
LIMS2-207ENST00000409808 CCDC151A5D8V7 595 aa22.17■■□□□ 1.14
LIMS2-207ENST00000409808 SMCO2A6NFE2 343 aa22.17■■□□□ 1.14
LIMS2-207ENST00000409808 N4BP3O15049 544 aa22.17■■□□□ 1.14
LIMS2-207ENST00000409808 TBC1D8O95759 1140 aa22.17■■□□□ 1.14
LIMS2-207ENST00000409808 ECE1P42892 770 aa22.17■■□□□ 1.14
LIMS2-207ENST00000409808 CPLX3Q8WVH0 158 aa22.17■■□□□ 1.14
LIMS2-207ENST00000409808 PPP1R11O60927 126 aaPredicted RBP22.16■■□□□ 1.14
LIMS2-207ENST00000409808 GYPCP04921 128 aa22.16■■□□□ 1.14
LIMS2-207ENST00000409808 CASP1P29466 404 aa22.16■■□□□ 1.14
LIMS2-207ENST00000409808 KRT31Q15323 416 aa22.16■■□□□ 1.14
LIMS2-207ENST00000409808 GPATCH4Q5T3I0 446 aaKnown RBP22.16■■□□□ 1.14
LIMS2-207ENST00000409808 ACER1Q8TDN7 264 aa22.16■■□□□ 1.14
LIMS2-207ENST00000409808 LZTFL1Q9NQ48 299 aa22.16■■□□□ 1.14
LIMS2-207ENST00000409808 CYP2C19P33261 490 aa22.15■■□□□ 1.14
LIMS2-207ENST00000409808 CHMP4BP1P59074 171 aa22.15■■□□□ 1.14
LIMS2-207ENST00000409808 CYP26C1Q6V0L0 522 aa22.15■■□□□ 1.14
LIMS2-207ENST00000409808 CCDC84Q86UT8 332 aaPredicted RBP22.15■■□□□ 1.14
LIMS2-207ENST00000409808 SPICE1Q8N0Z3 855 aa22.15■■□□□ 1.14
LIMS2-207ENST00000409808 HNRNPLLQ8WVV9 542 aaKnown RBP22.15■■□□□ 1.14
LIMS2-207ENST00000409808 ZMYND12Q9H0C1 365 aa22.15■■□□□ 1.14
LIMS2-207ENST00000409808 ST7Q9NRC1 585 aa22.15■■□□□ 1.14
LIMS2-207ENST00000409808 HACL1Q9UJ83 578 aa22.15■■□□□ 1.14
LIMS2-207ENST00000409808 H7C1D1 291 aa22.15■■□□□ 1.14
LIMS2-207ENST00000409808 NDUFB10O96000 172 aa22.15■■□□□ 1.14
LIMS2-207ENST00000409808 COPB1P53618 953 aaKnown RBP22.15■■□□□ 1.14
LIMS2-207ENST00000409808 SMYD4Q8IYR2 804 aaPredicted RBP22.15■■□□□ 1.14
LIMS2-207ENST00000409808 ZBTB21Q9ULJ3 1066 aa22.15■■□□□ 1.14
LIMS2-207ENST00000409808 CTAGE9A4FU28 777 aa22.14■■□□□ 1.14
LIMS2-207ENST00000409808 KIF4BQ2VIQ3 1234 aa22.14■■□□□ 1.14
LIMS2-207ENST00000409808 TCP11X2Q5H9J9 407 aa22.14■■□□□ 1.14
LIMS2-207ENST00000409808 DAGLBQ8NCG7 672 aa22.14■■□□□ 1.14
LIMS2-207ENST00000409808 TEPSINQ96N21 525 aa22.14■■□□□ 1.14
LIMS2-207ENST00000409808 SEC31AO94979 1220 aaKnown RBP22.14■■□□□ 1.13
LIMS2-207ENST00000409808 MYL1P05976 194 aa22.14■■□□□ 1.13
LIMS2-207ENST00000409808 TUBBP07437 444 aa22.14■■□□□ 1.13
LIMS2-207ENST00000409808 MCM7P33993 719 aa22.14■■□□□ 1.13
LIMS2-207ENST00000409808 TNNI2P48788 182 aa22.14■■□□□ 1.13
LIMS2-207ENST00000409808 FXR1P51114 621 aaKnown RBP eCLIP22.14■■□□□ 1.13
LIMS2-207ENST00000409808 SNAP25P60880 206 aa22.14■■□□□ 1.13
LIMS2-207ENST00000409808 KIAA1755Q5JYT7 1200 aa22.14■■□□□ 1.13
LIMS2-207ENST00000409808 DCAF4Q8WV16 495 aa22.14■■□□□ 1.13
LIMS2-207ENST00000409808 SBF1O95248 1867 aa22.14■■□□□ 1.13
LIMS2-207ENST00000409808 CCDC194A0A1B0GVG4 234 aa22.13■■□□□ 1.13
LIMS2-207ENST00000409808 RPN1P04843 607 aaKnown RBP22.13■■□□□ 1.13
LIMS2-207ENST00000409808 LMNB1P20700 586 aa22.13■■□□□ 1.13
LIMS2-207ENST00000409808 INF2Q27J81 1249 aa22.13■■□□□ 1.13
LIMS2-207ENST00000409808 ZNF569Q5MCW4 686 aa22.13■■□□□ 1.13
LIMS2-207ENST00000409808 NELFBQ8WX92 580 aa22.13■■□□□ 1.13
LIMS2-207ENST00000409808 SYT17Q9BSW7 474 aa22.13■■□□□ 1.13
LIMS2-207ENST00000409808 ABHD10Q9NUJ1 306 aa22.13■■□□□ 1.13
LIMS2-207ENST00000409808 PNMA6FA0A0J9YX94 578 aa22.13■■□□□ 1.13
LIMS2-207ENST00000409808 TBC1D12O60347 775 aa22.13■■□□□ 1.13
LIMS2-207ENST00000409808 MSL3Q8N5Y2 521 aaKnown RBP22.13■■□□□ 1.13
LIMS2-207ENST00000409808 BIN2Q9UBW5 565 aaPredicted RBP22.13■■□□□ 1.13
LIMS2-207ENST00000409808 KCNJ18B7U540 433 aa22.12■■□□□ 1.13
LIMS2-207ENST00000409808 KCNJ12Q14500 433 aa22.12■■□□□ 1.13
LIMS2-207ENST00000409808 IL17AQ16552 155 aa22.12■■□□□ 1.13
LIMS2-207ENST00000409808 C4orf32Q8N8J7 132 aa22.12■■□□□ 1.13
LIMS2-207ENST00000409808 GMCL1P1Q8NEA9 526 aa22.12■■□□□ 1.13
LIMS2-207ENST00000409808 IRX2Q9BZI1 471 aaPredicted RBP22.12■■□□□ 1.13
LIMS2-207ENST00000409808 BLZF1Q9H2G9 400 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms