RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 CEP290O15078 2479 aa35.95■■■■□ 3.35
TRAF3IP1-203ENST00000409739 EIF2AK2P19525 551 aaKnown RBP35.95■■■■□ 3.35
TRAF3IP1-203ENST00000409739 PDIA3P30101 505 aaKnown RBP35.95■■■■□ 3.35
TRAF3IP1-203ENST00000409739 ARHGEF16Q5VV41 709 aa35.95■■■■□ 3.35
TRAF3IP1-203ENST00000409739 RNF180Q86T96 592 aa35.95■■■■□ 3.35
TRAF3IP1-203ENST00000409739 GPKOWQ92917 476 aaPredicted RBP eCLIP35.95■■■■□ 3.35
TRAF3IP1-203ENST00000409739 IWS1Q96ST2 819 aa35.95■■■■□ 3.35
TRAF3IP1-203ENST00000409739 GNEQ9Y223 722 aaKnown RBP35.95■■■■□ 3.35
TRAF3IP1-203ENST00000409739 SMPD1P17405 629 aa35.94■■■■□ 3.34
TRAF3IP1-203ENST00000409739 HEATR3Q7Z4Q2 680 aa35.94■■■■□ 3.34
TRAF3IP1-203ENST00000409739 UPF3AQ9H1J1 476 aaKnown RBP35.94■■■■□ 3.34
TRAF3IP1-203ENST00000409739 WWC2Q6AWC2 1192 aa35.93■■■■□ 3.34
TRAF3IP1-203ENST00000409739 IQSEC1Q6DN90 963 aa35.93■■■■□ 3.34
TRAF3IP1-203ENST00000409739 DPF3Q92784 378 aa35.93■■■■□ 3.34
TRAF3IP1-203ENST00000409739 LARP6Q9BRS8 491 aaKnown RBP35.93■■■■□ 3.34
TRAF3IP1-203ENST00000409739 V9GY48 417 aaPredicted RBP35.93■■■■□ 3.34
TRAF3IP1-203ENST00000409739 RBM47A0AV96 593 aaKnown RBP35.92■■■■□ 3.34
TRAF3IP1-203ENST00000409739 MYADML2A6NDP7 307 aa35.92■■■■□ 3.34
TRAF3IP1-203ENST00000409739 GJA9P57773 515 aa35.92■■■■□ 3.34
TRAF3IP1-203ENST00000409739 TMEM63BQ5T3F8 832 aa35.92■■■■□ 3.34
TRAF3IP1-203ENST00000409739 NOL8Q76FK4 1167 aaKnown RBP35.92■■■■□ 3.34
TRAF3IP1-203ENST00000409739 FCHSD1Q86WN1 690 aa35.92■■■■□ 3.34
TRAF3IP1-203ENST00000409739 KLHDC9Q8NEP7 349 aa35.92■■■■□ 3.34
TRAF3IP1-203ENST00000409739 PDCD2LQ9BRP1 358 aa35.92■■■■□ 3.34
TRAF3IP1-203ENST00000409739 SENP6Q9GZR1 1112 aaPredicted RBP35.92■■■■□ 3.34
TRAF3IP1-203ENST00000409739 MYH7BA7E2Y1 1941 aa35.92■■■■□ 3.34
TRAF3IP1-203ENST00000409739 PTGS1P23219 599 aa35.91■■■■□ 3.34
TRAF3IP1-203ENST00000409739 CCT2P78371 535 aaKnown RBP35.91■■■■□ 3.34
TRAF3IP1-203ENST00000409739 IRX5P78411 483 aaPredicted RBP35.91■■■■□ 3.34
TRAF3IP1-203ENST00000409739 TLK2Q86UE8 772 aa35.91■■■■□ 3.34
TRAF3IP1-203ENST00000409739 NCOA5Q9HCD5 579 aaKnown RBP35.91■■■■□ 3.34
TRAF3IP1-203ENST00000409739 PIK3CDO00329 1044 aa35.9■■■■□ 3.34
TRAF3IP1-203ENST00000409739 MEIS2O14770 477 aa35.9■■■■□ 3.34
TRAF3IP1-203ENST00000409739 NR3C2P08235 984 aa35.9■■■■□ 3.34
TRAF3IP1-203ENST00000409739 CST5P28325 142 aaPredicted RBP35.9■■■■□ 3.34
TRAF3IP1-203ENST00000409739 STXBP2Q15833 593 aa35.9■■■■□ 3.34
TRAF3IP1-203ENST00000409739 USP17L6PQ6QN14 398 aa35.9■■■■□ 3.34
TRAF3IP1-203ENST00000409739 ZNF274Q96GC6 653 aaPredicted RBP35.9■■■■□ 3.34
TRAF3IP1-203ENST00000409739 WDR11Q9BZH6 1224 aa35.9■■■■□ 3.34
TRAF3IP1-203ENST00000409739 PHF24Q9UPV7 400 aa35.9■■■■□ 3.34
TRAF3IP1-203ENST00000409739 FRMPD4Q14CM0 1322 aa35.89■■■■□ 3.34
TRAF3IP1-203ENST00000409739 C6orf222P0C671 652 aaPredicted RBP35.89■■■■□ 3.34
TRAF3IP1-203ENST00000409739 NTRK3Q16288 839 aa35.89■■■■□ 3.34
TRAF3IP1-203ENST00000409739 DUSP28Q4G0W2 176 aa35.89■■■■□ 3.34
TRAF3IP1-203ENST00000409739 IL31RAQ8NI17 732 aa35.89■■■■□ 3.34
TRAF3IP1-203ENST00000409739 CUL5Q93034 780 aa35.89■■■■□ 3.34
TRAF3IP1-203ENST00000409739 ALDH8A1Q9H2A2 487 aaPredicted RBP35.89■■■■□ 3.34
TRAF3IP1-203ENST00000409739 SPC25Q9HBM1 224 aa35.89■■■■□ 3.34
TRAF3IP1-203ENST00000409739 CTAGE5O15320 804 aa35.88■■■■□ 3.33
TRAF3IP1-203ENST00000409739 NKX3-2P78367 333 aa35.88■■■■□ 3.33
TRAF3IP1-203ENST00000409739 PGM5Q15124 567 aa35.88■■■■□ 3.33
TRAF3IP1-203ENST00000409739 CCSAPQ6IQ19 270 aaPredicted RBP35.88■■■■□ 3.33
TRAF3IP1-203ENST00000409739 TYW1BQ6NUM6 668 aa35.88■■■■□ 3.33
TRAF3IP1-203ENST00000409739 SMARCC2Q8TAQ2 1214 aa35.88■■■■□ 3.33
TRAF3IP1-203ENST00000409739 SCFD2Q8WU76 684 aa35.88■■■■□ 3.33
TRAF3IP1-203ENST00000409739 PSTPIP2Q9H939 334 aa35.88■■■■□ 3.33
TRAF3IP1-203ENST00000409739 hCG_1984214I3L0E3 225 aa35.87■■■■□ 3.33
TRAF3IP1-203ENST00000409739 STXBP3O00186 592 aa35.87■■■■□ 3.33
TRAF3IP1-203ENST00000409739 LRRC26Q2I0M4 334 aa35.87■■■■□ 3.33
TRAF3IP1-203ENST00000409739 ZNF713Q8N859 430 aaPredicted RBP35.87■■■■□ 3.33
TRAF3IP1-203ENST00000409739 TSEN34Q9BSV6 310 aaKnown RBP35.87■■■■□ 3.33
TRAF3IP1-203ENST00000409739 NAPAP54920 295 aa35.86■■■■□ 3.33
TRAF3IP1-203ENST00000409739 PFKFB3Q16875 520 aaPredicted RBP35.86■■■■□ 3.33
TRAF3IP1-203ENST00000409739 PPP1R18Q6NYC8 613 aa35.86■■■■□ 3.33
TRAF3IP1-203ENST00000409739 PHKBQ93100 1093 aa35.86■■■■□ 3.33
TRAF3IP1-203ENST00000409739 FERMT2Q96AC1 680 aa35.86■■■■□ 3.33
TRAF3IP1-203ENST00000409739 Q9Y3F1 56 aa35.86■■■■□ 3.33
TRAF3IP1-203ENST00000409739 EVI5O60447 810 aa35.85■■■■□ 3.33
TRAF3IP1-203ENST00000409739 ARIH2O95376 493 aa35.85■■■■□ 3.33
TRAF3IP1-203ENST00000409739 MYCLP12524 364 aaPredicted RBP35.85■■■■□ 3.33
TRAF3IP1-203ENST00000409739 IFNAR1P17181 557 aa35.85■■■■□ 3.33
TRAF3IP1-203ENST00000409739 KCNA10Q16322 511 aa35.85■■■■□ 3.33
TRAF3IP1-203ENST00000409739 SEPT14Q6ZU15 432 aa35.85■■■■□ 3.33
TRAF3IP1-203ENST00000409739 AP5M1Q9H0R1 490 aa35.85■■■■□ 3.33
TRAF3IP1-203ENST00000409739 BARHL2Q9NY43 387 aa35.85■■■■□ 3.33
TRAF3IP1-203ENST00000409739 GTF3C3Q9Y5Q9 886 aa35.85■■■■□ 3.33
TRAF3IP1-203ENST00000409739 DOCK5Q9H7D0 1870 aa35.85■■■■□ 3.33
TRAF3IP1-203ENST00000409739 A0A1W2PQ45 241 aaPredicted RBP35.84■■■■□ 3.33
TRAF3IP1-203ENST00000409739 A0A1W2PQY0 241 aa35.84■■■■□ 3.33
TRAF3IP1-203ENST00000409739 DYNC1LI2O43237 492 aaPredicted RBP35.84■■■■□ 3.33
TRAF3IP1-203ENST00000409739 PRPF3O43395 683 aaKnown RBP35.84■■■■□ 3.33
TRAF3IP1-203ENST00000409739 EIF3JO75822 258 aaKnown RBP35.84■■■■□ 3.33
TRAF3IP1-203ENST00000409739 SCG2P13521 617 aa35.84■■■■□ 3.33
TRAF3IP1-203ENST00000409739 ATN1P54259 1190 aaPredicted RBP35.84■■■■□ 3.33
TRAF3IP1-203ENST00000409739 AK2P54819 239 aa35.84■■■■□ 3.33
TRAF3IP1-203ENST00000409739 STK3Q13188 491 aa35.84■■■■□ 3.33
TRAF3IP1-203ENST00000409739 UBE2SQ16763 222 aa35.84■■■■□ 3.33
TRAF3IP1-203ENST00000409739 PRPF38BQ5VTL8 546 aaKnown RBP35.84■■■■□ 3.33
TRAF3IP1-203ENST00000409739 RBM27Q9P2N5 1060 aaKnown RBP35.84■■■■□ 3.33
TRAF3IP1-203ENST00000409739 MOXD2PA6NHM9 499 aa35.83■■■■□ 3.33
TRAF3IP1-203ENST00000409739 PPFIA3O75145 1194 aa35.83■■■■□ 3.33
TRAF3IP1-203ENST00000409739 CCND2P30279 289 aa35.83■■■■□ 3.33
TRAF3IP1-203ENST00000409739 ACLYP53396 1101 aa35.83■■■■□ 3.33
TRAF3IP1-203ENST00000409739 BEX3Q00994 111 aa35.83■■■■□ 3.33
TRAF3IP1-203ENST00000409739 TTLL4Q14679 1199 aa35.83■■■■□ 3.33
TRAF3IP1-203ENST00000409739 PKN1Q16512 942 aa35.83■■■■□ 3.33
TRAF3IP1-203ENST00000409739 GNASQ5JWF2 1037 aa35.83■■■■□ 3.33
TRAF3IP1-203ENST00000409739 VSIG10LQ86VR7 867 aa35.83■■■■□ 3.33
TRAF3IP1-203ENST00000409739 PCSK9Q8NBP7 692 aaKnown RBP35.83■■■■□ 3.33
TRAF3IP1-203ENST00000409739 RNF26Q9BY78 433 aaPredicted RBP35.83■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms