RNA–Protein interactions for RNA: ENST00000409532.5

ITGA6-203, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 3,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-203ENST00000409532 ANKS1AQ92625 1134 aa12.52□□□□□ -0.4
ITGA6-203ENST00000409532 GBP3Q9H0R5 595 aa12.52□□□□□ -0.4
ITGA6-203ENST00000409532 CD209Q9NNX6 404 aa12.52□□□□□ -0.4
ITGA6-203ENST00000409532 CAPN6Q9Y6Q1 641 aa12.52□□□□□ -0.4
ITGA6-203ENST00000409532 LAMB2P55268 1798 aa12.52□□□□□ -0.41
ITGA6-203ENST00000409532 KIAA1551Q9HCM1 1747 aa12.52□□□□□ -0.41
ITGA6-203ENST00000409532 C6orf229H3BNL8 230 aa12.52□□□□□ -0.41
ITGA6-203ENST00000409532 PRPHP41219 470 aa12.52□□□□□ -0.41
ITGA6-203ENST00000409532 AMPD3Q01432 767 aa12.52□□□□□ -0.41
ITGA6-203ENST00000409532 GRAPQ13588 217 aa12.52□□□□□ -0.41
ITGA6-203ENST00000409532 GALNT17Q6IS24 598 aa12.52□□□□□ -0.41
ITGA6-203ENST00000409532 FOXR1Q6PIV2 292 aa12.52□□□□□ -0.41
ITGA6-203ENST00000409532 GRAPLQ8TC17 118 aaPredicted RBP12.52□□□□□ -0.41
ITGA6-203ENST00000409532 SNX29Q8TEQ0 813 aa12.52□□□□□ -0.41
ITGA6-203ENST00000409532 RPGRQ92834 1020 aaKnown RBP12.52□□□□□ -0.41
ITGA6-203ENST00000409532 SECISBP2LQ93073 1101 aaKnown RBP12.52□□□□□ -0.41
ITGA6-203ENST00000409532 CRACR2AQ9BSW2 395 aa12.52□□□□□ -0.41
ITGA6-203ENST00000409532 IFIH1Q9BYX4 1025 aaKnown RBP12.52□□□□□ -0.41
ITGA6-203ENST00000409532 ANKRD65E5RJM6 399 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 LAD1O00515 517 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 EIF4A3P38919 411 aaKnown RBP12.51□□□□□ -0.41
ITGA6-203ENST00000409532 SLC7A5Q01650 507 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 ARID5AQ03989 594 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 CNNM4Q6P4Q7 775 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.51□□□□□ -0.41
ITGA6-203ENST00000409532 FAM114A1Q8IWE2 563 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 EXOC4Q96A65 974 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 C7orf25Q9BPX7 421 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 NDST4Q9H3R1 872 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 BLOC1S4Q9NUP1 217 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 ARHGAP20Q9P2F6 1191 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 CNTNAP4Q9C0A0 1308 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 NCK2O43639 380 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 BUB1O43683 1085 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 APBA1Q02410 837 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 MEA1Q16626 185 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 TMC4Q7Z404 712 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 COG1Q8WTW3 980 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 LARP4BQ92615 738 aaKnown RBP12.51□□□□□ -0.41
ITGA6-203ENST00000409532 AK8Q96MA6 479 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 SPZ1Q9BXG8 430 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 ZHX3Q9H4I2 956 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 FAM204AQ9H8W3 233 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 LCMT1Q9UIC8 334 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 TTBK2Q6IQ55 1244 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 NELFCDQ8IXH7 590 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 NEDD1Q8NHV4 660 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 HDAC7Q8WUI4 952 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 PNMA5Q96PV4 448 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 NUP58Q9BVL2 599 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 ZNF287Q9HBT7 754 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 LAMB1P07942 1786 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 CASZ1Q86V15 1759 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 IRS2Q9Y4H2 1338 aa12.51□□□□□ -0.41
ITGA6-203ENST00000409532 LRRC53A6NM62 1247 aa12.5□□□□□ -0.41
ITGA6-203ENST00000409532 TDRD12Q587J7 1177 aaKnown RBP12.5□□□□□ -0.41
ITGA6-203ENST00000409532 LEKR1Q6ZMV7 388 aa12.5□□□□□ -0.41
ITGA6-203ENST00000409532 FAM196AQ6ZSG2 479 aa12.5□□□□□ -0.41
ITGA6-203ENST00000409532 BARGINQ6ZT62 677 aa12.5□□□□□ -0.41
ITGA6-203ENST00000409532 NOC3LQ8WTT2 800 aaKnown RBP12.5□□□□□ -0.41
ITGA6-203ENST00000409532 RABEP2Q9H5N1 569 aa12.5□□□□□ -0.41
ITGA6-203ENST00000409532 LEMD3Q9Y2U8 911 aa12.5□□□□□ -0.41
ITGA6-203ENST00000409532 EIF3CLB5ME19 914 aaKnown RBP12.5□□□□□ -0.41
ITGA6-203ENST00000409532 MYL1P05976 194 aa12.5□□□□□ -0.41
ITGA6-203ENST00000409532 PPP4CP60510 307 aa12.5□□□□□ -0.41
ITGA6-203ENST00000409532 VWA3BQ502W6 1294 aa12.5□□□□□ -0.41
ITGA6-203ENST00000409532 TRAPPC3LQ5T215 181 aa12.5□□□□□ -0.41
ITGA6-203ENST00000409532 PAPD7Q5XG87 772 aaKnown RBP12.5□□□□□ -0.41
ITGA6-203ENST00000409532 NFRKBQ6P4R8 1299 aa12.5□□□□□ -0.41
ITGA6-203ENST00000409532 DPP8Q6V1X1 898 aaPredicted RBP12.5□□□□□ -0.41
ITGA6-203ENST00000409532 C16orf86Q6ZW13 317 aa12.5□□□□□ -0.41
ITGA6-203ENST00000409532 CACNA2D4Q7Z3S7 1137 aa12.5□□□□□ -0.41
ITGA6-203ENST00000409532 DDX12PQ92771 950 aa12.5□□□□□ -0.41
ITGA6-203ENST00000409532 EIF3CQ99613 913 aaKnown RBP12.5□□□□□ -0.41
ITGA6-203ENST00000409532 EP400Q96L91 3159 aa12.5□□□□□ -0.41
ITGA6-203ENST00000409532 FAM170AA1A519 330 aa12.5□□□□□ -0.41
ITGA6-203ENST00000409532 MPHOSPH10O00566 681 aaKnown RBP12.5□□□□□ -0.41
ITGA6-203ENST00000409532 RNF40O75150 1001 aa12.5□□□□□ -0.41
ITGA6-203ENST00000409532 KIF11P52732 1056 aa12.5□□□□□ -0.41
ITGA6-203ENST00000409532 VAV2P52735 878 aa12.5□□□□□ -0.41
ITGA6-203ENST00000409532 GTF2IP78347 998 aa12.5□□□□□ -0.41
ITGA6-203ENST00000409532 GFPT1Q06210 699 aaPredicted RBP12.5□□□□□ -0.41
ITGA6-203ENST00000409532 KCTD19Q17RG1 926 aaPredicted RBP12.5□□□□□ -0.41
ITGA6-203ENST00000409532 LZTS2Q9BRK4 669 aa12.5□□□□□ -0.41
ITGA6-203ENST00000409532 MXD3Q9BW11 206 aa12.5□□□□□ -0.41
ITGA6-203ENST00000409532 PCDHA13Q9Y5I0 950 aa12.5□□□□□ -0.41
ITGA6-203ENST00000409532 PDHBP11177 359 aa12.49□□□□□ -0.41
ITGA6-203ENST00000409532 AKR1B1P15121 316 aa12.49□□□□□ -0.41
ITGA6-203ENST00000409532 RNASE9P60153 205 aaKnown RBP12.49□□□□□ -0.41
ITGA6-203ENST00000409532 ECM1Q16610 540 aa12.49□□□□□ -0.41
ITGA6-203ENST00000409532 C10orf67Q8IYJ2 551 aa12.49□□□□□ -0.41
ITGA6-203ENST00000409532 CUEDC2Q9H467 287 aa12.49□□□□□ -0.41
ITGA6-203ENST00000409532 POLD4Q9HCU8 107 aa12.49□□□□□ -0.41
ITGA6-203ENST00000409532 TRIM66O15016 1216 aa12.49□□□□□ -0.41
ITGA6-203ENST00000409532 ACTN2P35609 894 aa12.49□□□□□ -0.41
ITGA6-203ENST00000409532 ADCY7P51828 1080 aa12.49□□□□□ -0.41
ITGA6-203ENST00000409532 RASSF7Q02833 373 aa12.49□□□□□ -0.41
ITGA6-203ENST00000409532 TMEM266Q2M3C6 531 aa12.49□□□□□ -0.41
ITGA6-203ENST00000409532 EHBP1Q8NDI1 1231 aa12.49□□□□□ -0.41
ITGA6-203ENST00000409532 SNED1Q8TER0 1413 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms