RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 CPT1AP50416 773 aa9.17□□□□□ -0.94
LSM5-202ENST00000409292 CCL23P55773 120 aa9.17□□□□□ -0.94
LSM5-202ENST00000409292 NKX3-2P78367 333 aa9.17□□□□□ -0.94
LSM5-202ENST00000409292 BEX3Q00994 111 aa9.17□□□□□ -0.94
LSM5-202ENST00000409292 TMEM67Q5HYA8 995 aa9.17□□□□□ -0.94
LSM5-202ENST00000409292 KIAA1211Q6ZU35 1233 aa9.17□□□□□ -0.94
LSM5-202ENST00000409292 C16orf59Q7L2K0 433 aa9.17□□□□□ -0.94
LSM5-202ENST00000409292 LRRC47Q8N1G4 583 aaKnown RBP9.17□□□□□ -0.94
LSM5-202ENST00000409292 KBTBD3Q8NAB2 608 aa9.17□□□□□ -0.94
LSM5-202ENST00000409292 NEDD1Q8NHV4 660 aa9.17□□□□□ -0.94
LSM5-202ENST00000409292 CEP95Q96GE4 821 aa9.17□□□□□ -0.94
LSM5-202ENST00000409292 TRERF1Q96PN7 1200 aa9.17□□□□□ -0.94
LSM5-202ENST00000409292 NAPBQ9H115 298 aa9.17□□□□□ -0.94
LSM5-202ENST00000409292 VTA1Q9NP79 307 aa9.17□□□□□ -0.94
LSM5-202ENST00000409292 CXXC1Q9P0U4 656 aaPredicted RBP9.17□□□□□ -0.94
LSM5-202ENST00000409292 COG5Q9UP83 839 aa9.17□□□□□ -0.94
LSM5-202ENST00000409292 HCN4Q9Y3Q4 1203 aa9.17□□□□□ -0.94
LSM5-202ENST00000409292 LOC102724159A0A0B4J2E5 919 aa9.16□□□□□ -0.94
LSM5-202ENST00000409292 TSPY2A6NKD2 308 aa9.16□□□□□ -0.94
LSM5-202ENST00000409292 GSG1L2A8MUP6 293 aa9.16□□□□□ -0.94
LSM5-202ENST00000409292 PATL2C9JE40 543 aaKnown RBP9.16□□□□□ -0.94
LSM5-202ENST00000409292 KPNA6O60684 536 aa9.16□□□□□ -0.94
LSM5-202ENST00000409292 PRDM1O75626 825 aa9.16□□□□□ -0.94
LSM5-202ENST00000409292 TFAP4Q01664 338 aa9.16□□□□□ -0.94
LSM5-202ENST00000409292 PWP2Q15269 919 aaKnown RBP9.16□□□□□ -0.94
LSM5-202ENST00000409292 FAM47CQ5HY64 1035 aa9.16□□□□□ -0.94
LSM5-202ENST00000409292 SMYD5Q6GMV2 418 aa9.16□□□□□ -0.94
LSM5-202ENST00000409292 NSMFQ6X4W1 530 aa9.16□□□□□ -0.94
LSM5-202ENST00000409292 CCDC155Q8N6L0 562 aa9.16□□□□□ -0.94
LSM5-202ENST00000409292 FAM133AQ8N9E0 248 aa9.16□□□□□ -0.94
LSM5-202ENST00000409292 GMCL1Q96IK5 515 aa9.16□□□□□ -0.94
LSM5-202ENST00000409292 SLC9A7Q96T83 725 aa9.16□□□□□ -0.94
LSM5-202ENST00000409292 NOC4LQ9BVI4 516 aaKnown RBP9.16□□□□□ -0.94
LSM5-202ENST00000409292 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.16□□□□□ -0.94
LSM5-202ENST00000409292 FTOQ9C0B1 505 aaKnown RBP eCLIP9.16□□□□□ -0.94
LSM5-202ENST00000409292 A1CFQ9NQ94 594 aaKnown RBP9.16□□□□□ -0.94
LSM5-202ENST00000409292 ZBTB40Q9NUA8 1239 aa9.16□□□□□ -0.94
LSM5-202ENST00000409292 CCPG1Q9ULG6 757 aa9.16□□□□□ -0.94
LSM5-202ENST00000409292 STX8Q9UNK0 236 aa9.16□□□□□ -0.94
LSM5-202ENST00000409292 PARP14Q460N5 1801 aa9.16□□□□□ -0.94
LSM5-202ENST00000409292 PLA2G6O60733 806 aa9.15□□□□□ -0.94
LSM5-202ENST00000409292 KCNJ6P48051 423 aa9.15□□□□□ -0.94
LSM5-202ENST00000409292 CNTN2Q02246 1040 aa9.15□□□□□ -0.94
LSM5-202ENST00000409292 BFSP2Q13515 415 aa9.15□□□□□ -0.94
LSM5-202ENST00000409292 CCDC96Q2M329 555 aa9.15□□□□□ -0.94
LSM5-202ENST00000409292 SLFNL1Q499Z3 407 aa9.15□□□□□ -0.94
LSM5-202ENST00000409292 SWT1Q5T5J6 900 aaKnown RBP9.15□□□□□ -0.94
LSM5-202ENST00000409292 RCSD1Q6JBY9 416 aa9.15□□□□□ -0.94
LSM5-202ENST00000409292 EEPD1Q7L9B9 569 aa9.15□□□□□ -0.94
LSM5-202ENST00000409292 IFNL3Q8IZI9 196 aa9.15□□□□□ -0.94
LSM5-202ENST00000409292 SLC43A3Q8NBI5 491 aa9.15□□□□□ -0.94
LSM5-202ENST00000409292 PHOSPHO2Q8TCD6 241 aa9.15□□□□□ -0.94
LSM5-202ENST00000409292 IL21Q9HBE4 155 aa9.15□□□□□ -0.94
LSM5-202ENST00000409292 GNEQ9Y223 722 aaKnown RBP9.15□□□□□ -0.94
LSM5-202ENST00000409292 NCOR1O75376 2440 aa9.15□□□□□ -0.94
LSM5-202ENST00000409292 TNKSO95271 1327 aa9.14□□□□□ -0.95
LSM5-202ENST00000409292 MYH7P12883 1935 aa9.14□□□□□ -0.95
LSM5-202ENST00000409292 IGKV6D-41A0A0C4DH26 115 aa9.14□□□□□ -0.95
LSM5-202ENST00000409292 NKRFO15226 690 aaKnown RBP eCLIP9.14□□□□□ -0.95
LSM5-202ENST00000409292 B4GALT4O60513 344 aa9.14□□□□□ -0.95
LSM5-202ENST00000409292 MYL3P08590 195 aa9.14□□□□□ -0.95
LSM5-202ENST00000409292 SMPD1P17405 629 aa9.14□□□□□ -0.95
LSM5-202ENST00000409292 MCCP23508 829 aa9.14□□□□□ -0.95
LSM5-202ENST00000409292 PLA2G5P39877 138 aa9.14□□□□□ -0.95
LSM5-202ENST00000409292 PDE4DQ08499 809 aa9.14□□□□□ -0.95
LSM5-202ENST00000409292 ADGRE1Q14246 886 aa9.14□□□□□ -0.95
LSM5-202ENST00000409292 DUSP28Q4G0W2 176 aa9.14□□□□□ -0.95
LSM5-202ENST00000409292 OR6J1Q8NGC5 347 aa9.14□□□□□ -0.95
LSM5-202ENST00000409292 AGBL1Q96MI9 1066 aa9.14□□□□□ -0.95
LSM5-202ENST00000409292 CRBNQ96SW2 442 aa9.14□□□□□ -0.95
LSM5-202ENST00000409292 MTG1Q9BT17 334 aaPredicted RBP9.14□□□□□ -0.95
LSM5-202ENST00000409292 WDR11Q9BZH6 1224 aa9.14□□□□□ -0.95
LSM5-202ENST00000409292 TRPV6Q9H1D0 765 aa9.14□□□□□ -0.95
LSM5-202ENST00000409292 ALDH8A1Q9H2A2 487 aaPredicted RBP9.14□□□□□ -0.95
LSM5-202ENST00000409292 PLIN4Q96Q06 1357 aa9.13□□□□□ -0.95
LSM5-202ENST00000409292 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.13□□□□□ -0.95
LSM5-202ENST00000409292 PTPDC1A2A3K4 754 aa9.13□□□□□ -0.95
LSM5-202ENST00000409292 SMIM22K7EJ46 135 aa9.13□□□□□ -0.95
LSM5-202ENST00000409292 RANBP6O60518 1105 aaKnown RBP9.13□□□□□ -0.95
LSM5-202ENST00000409292 PARNO95453 639 aaKnown RBP9.13□□□□□ -0.95
LSM5-202ENST00000409292 ICAM1P05362 532 aa9.13□□□□□ -0.95
LSM5-202ENST00000409292 RABGGTBP53611 331 aa9.13□□□□□ -0.95
LSM5-202ENST00000409292 PSMC6P62333 389 aa9.13□□□□□ -0.95
LSM5-202ENST00000409292 PTPN11Q06124 597 aaPredicted RBP9.13□□□□□ -0.95
LSM5-202ENST00000409292 PPARAQ07869 468 aa9.13□□□□□ -0.95
LSM5-202ENST00000409292 PPP2R5BQ15173 497 aa9.13□□□□□ -0.95
LSM5-202ENST00000409292 DEFB128Q7Z7B8 93 aa9.13□□□□□ -0.95
LSM5-202ENST00000409292 FBXO16Q8IX29 292 aaPredicted RBP9.13□□□□□ -0.95
LSM5-202ENST00000409292 DCAF4Q8WV16 495 aa9.13□□□□□ -0.95
LSM5-202ENST00000409292 OSBP2Q969R2 916 aa9.13□□□□□ -0.95
LSM5-202ENST00000409292 FSD1Q9BTV5 496 aa9.13□□□□□ -0.95
LSM5-202ENST00000409292 PRR14Q9BWN1 585 aa9.13□□□□□ -0.95
LSM5-202ENST00000409292 KATNBL1Q9H079 304 aa9.13□□□□□ -0.95
LSM5-202ENST00000409292 TOMM22Q9NS69 142 aa9.13□□□□□ -0.95
LSM5-202ENST00000409292 CYP39A1Q9NYL5 469 aa9.13□□□□□ -0.95
LSM5-202ENST00000409292 PRR12Q9ULL5 1215 aa9.13□□□□□ -0.95
LSM5-202ENST00000409292 MTMR7Q9Y216 660 aa9.13□□□□□ -0.95
LSM5-202ENST00000409292 YBX2Q9Y2T7 364 aaKnown RBP9.13□□□□□ -0.95
LSM5-202ENST00000409292 TTC41PQ6P2S7 1318 aa9.12□□□□□ -0.95
LSM5-202ENST00000409292 MYH4Q9Y623 1939 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms