RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 AGXT2Q9BYV1 514 aa20.72■□□□□ 0.91
PDLIM2-206ENST00000409141 AP5M1Q9H0R1 490 aa20.72■□□□□ 0.91
PDLIM2-206ENST00000409141 UPF3AQ9H1J1 476 aaKnown RBP20.72■□□□□ 0.91
PDLIM2-206ENST00000409141 PHF24Q9UPV7 400 aa20.72■□□□□ 0.91
PDLIM2-206ENST00000409141 DYNC1LI2O43237 492 aaPredicted RBP20.71■□□□□ 0.91
PDLIM2-206ENST00000409141 CDC27P30260 824 aa20.71■□□□□ 0.91
PDLIM2-206ENST00000409141 METAP2P50579 478 aaKnown RBP eCLIP20.71■□□□□ 0.91
PDLIM2-206ENST00000409141 IRX5P78411 483 aaPredicted RBP20.71■□□□□ 0.91
PDLIM2-206ENST00000409141 PPP2R5BQ15173 497 aa20.71■□□□□ 0.91
PDLIM2-206ENST00000409141 STXBP2Q15833 593 aa20.71■□□□□ 0.91
PDLIM2-206ENST00000409141 KCNA10Q16322 511 aa20.71■□□□□ 0.91
PDLIM2-206ENST00000409141 FCHSD1Q86WN1 690 aa20.71■□□□□ 0.91
PDLIM2-206ENST00000409141 WDR11Q9BZH6 1224 aa20.71■□□□□ 0.91
PDLIM2-206ENST00000409141 UPF3BQ9BZI7 483 aaKnown RBP20.71■□□□□ 0.91
PDLIM2-206ENST00000409141 PXMP2Q9NR77 195 aa20.71■□□□□ 0.91
PDLIM2-206ENST00000409141 FAM217BQ9NTX9 383 aaPredicted RBP20.71■□□□□ 0.91
PDLIM2-206ENST00000409141 GNEQ9Y223 722 aaKnown RBP20.71■□□□□ 0.91
PDLIM2-206ENST00000409141 CCDC196A0A1B0GTZ2 297 aa20.7■□□□□ 0.9
PDLIM2-206ENST00000409141 RBM47A0AV96 593 aaKnown RBP20.7■□□□□ 0.9
PDLIM2-206ENST00000409141 MYADML2A6NDP7 307 aa20.7■□□□□ 0.9
PDLIM2-206ENST00000409141 NR3C2P08235 984 aa20.7■□□□□ 0.9
PDLIM2-206ENST00000409141 GNASQ5JWF2 1037 aa20.7■□□□□ 0.9
PDLIM2-206ENST00000409141 TMEM63BQ5T3F8 832 aa20.7■□□□□ 0.9
PDLIM2-206ENST00000409141 SLC39A5Q6ZMH5 540 aa20.7■□□□□ 0.9
PDLIM2-206ENST00000409141 TLK2Q86UE8 772 aa20.7■□□□□ 0.9
PDLIM2-206ENST00000409141 PCSK9Q8NBP7 692 aaKnown RBP20.7■□□□□ 0.9
PDLIM2-206ENST00000409141 V9GY48 417 aaPredicted RBP20.7■□□□□ 0.9
PDLIM2-206ENST00000409141 CST5P28325 142 aaPredicted RBP20.69■□□□□ 0.9
PDLIM2-206ENST00000409141 ADD1P35611 737 aaKnown RBP20.69■□□□□ 0.9
PDLIM2-206ENST00000409141 ACLYP53396 1101 aa20.69■□□□□ 0.9
PDLIM2-206ENST00000409141 DUSP28Q4G0W2 176 aa20.69■□□□□ 0.9
PDLIM2-206ENST00000409141 CUL5Q93034 780 aa20.69■□□□□ 0.9
PDLIM2-206ENST00000409141 Q9Y3F1 56 aa20.69■□□□□ 0.9
PDLIM2-206ENST00000409141 CNTNAP5Q8WYK1 1306 aa20.69■□□□□ 0.9
PDLIM2-206ENST00000409141 MOXD2PA6NHM9 499 aa20.69■□□□□ 0.9
PDLIM2-206ENST00000409141 PTGS1P23219 599 aa20.69■□□□□ 0.9
PDLIM2-206ENST00000409141 BEX3Q00994 111 aa20.69■□□□□ 0.9
PDLIM2-206ENST00000409141 FUT2Q10981 343 aa20.69■□□□□ 0.9
PDLIM2-206ENST00000409141 CCSAPQ6IQ19 270 aaPredicted RBP20.69■□□□□ 0.9
PDLIM2-206ENST00000409141 HEATR3Q7Z4Q2 680 aa20.69■□□□□ 0.9
PDLIM2-206ENST00000409141 SMARCC2Q8TAQ2 1214 aa20.69■□□□□ 0.9
PDLIM2-206ENST00000409141 SCFD2Q8WU76 684 aa20.69■□□□□ 0.9
PDLIM2-206ENST00000409141 PDCD2LQ9BRP1 358 aa20.69■□□□□ 0.9
PDLIM2-206ENST00000409141 PDRG1Q9NUG6 133 aa20.69■□□□□ 0.9
PDLIM2-206ENST00000409141 A0A1W2PQ45 241 aaPredicted RBP20.68■□□□□ 0.9
PDLIM2-206ENST00000409141 A0A1W2PQY0 241 aa20.68■□□□□ 0.9
PDLIM2-206ENST00000409141 EIF3JO75822 258 aaKnown RBP20.68■□□□□ 0.9
PDLIM2-206ENST00000409141 SEC24BO95487 1268 aa20.68■□□□□ 0.9
PDLIM2-206ENST00000409141 MYCLP12524 364 aaPredicted RBP20.68■□□□□ 0.9
PDLIM2-206ENST00000409141 ANAPC15P60006 121 aa20.68■□□□□ 0.9
PDLIM2-206ENST00000409141 TOB2Q14106 344 aaPredicted RBP20.68■□□□□ 0.9
PDLIM2-206ENST00000409141 SEPT14Q6ZU15 432 aa20.68■□□□□ 0.9
PDLIM2-206ENST00000409141 PSTPIP2Q9H939 334 aa20.68■□□□□ 0.9
PDLIM2-206ENST00000409141 LRRC37A2A6NM11 1700 aa20.67■□□□□ 0.9
PDLIM2-206ENST00000409141 CTAGE5O15320 804 aa20.67■□□□□ 0.9
PDLIM2-206ENST00000409141 ASGR1P07306 291 aa20.67■□□□□ 0.9
PDLIM2-206ENST00000409141 TXNP10599 105 aaKnown RBP20.67■□□□□ 0.9
PDLIM2-206ENST00000409141 PDIA3P30101 505 aaKnown RBP20.67■□□□□ 0.9
PDLIM2-206ENST00000409141 EVCP57679 992 aa20.67■□□□□ 0.9
PDLIM2-206ENST00000409141 RTP1P59025 263 aa20.67■□□□□ 0.9
PDLIM2-206ENST00000409141 NKX3-2P78367 333 aa20.67■□□□□ 0.9
PDLIM2-206ENST00000409141 TTLL4Q14679 1199 aa20.67■□□□□ 0.9
PDLIM2-206ENST00000409141 FSCN1Q16658 493 aaKnown RBP20.67■□□□□ 0.9
PDLIM2-206ENST00000409141 USP17L6PQ6QN14 398 aa20.67■□□□□ 0.9
PDLIM2-206ENST00000409141 GPKOWQ92917 476 aaPredicted RBP eCLIP20.67■□□□□ 0.9
PDLIM2-206ENST00000409141 VTI1AQ96AJ9 217 aa20.67■□□□□ 0.9
PDLIM2-206ENST00000409141 ATP11BQ9Y2G3 1177 aa20.67■□□□□ 0.9
PDLIM2-206ENST00000409141 NKRFO15226 690 aaKnown RBP eCLIP20.66■□□□□ 0.9
PDLIM2-206ENST00000409141 ZEB2O60315 1214 aa20.66■□□□□ 0.9
PDLIM2-206ENST00000409141 PGM5Q15124 567 aa20.66■□□□□ 0.9
PDLIM2-206ENST00000409141 VSIG10LQ86VR7 867 aa20.66■□□□□ 0.9
PDLIM2-206ENST00000409141 GLT1D1Q96MS3 346 aa20.66■□□□□ 0.9
PDLIM2-206ENST00000409141 STARD7Q9NQZ5 370 aa20.66■□□□□ 0.9
PDLIM2-206ENST00000409141 ZMYND8Q9ULU4 1186 aaPredicted RBP20.66■□□□□ 0.9
PDLIM2-206ENST00000409141 ALPK3Q96L96 1907 aa20.66■□□□□ 0.9
PDLIM2-206ENST00000409141 MEIS2O14770 477 aa20.65■□□□□ 0.9
PDLIM2-206ENST00000409141 CCND2P30279 289 aa20.65■□□□□ 0.9
PDLIM2-206ENST00000409141 CCT2P78371 535 aaKnown RBP20.65■□□□□ 0.9
PDLIM2-206ENST00000409141 WWC2Q6AWC2 1192 aa20.65■□□□□ 0.9
PDLIM2-206ENST00000409141 OR6J1Q8NGC5 347 aa20.65■□□□□ 0.9
PDLIM2-206ENST00000409141 LARP6Q9BRS8 491 aaKnown RBP20.65■□□□□ 0.9
PDLIM2-206ENST00000409141 PIK3CDO00329 1044 aa20.64■□□□□ 0.89
PDLIM2-206ENST00000409141 SYN1P17600 705 aa20.64■□□□□ 0.89
PDLIM2-206ENST00000409141 NAPAP54920 295 aa20.64■□□□□ 0.89
PDLIM2-206ENST00000409141 SNX17Q15036 470 aa20.64■□□□□ 0.89
PDLIM2-206ENST00000409141 TRIM60Q495X7 471 aa20.64■□□□□ 0.89
PDLIM2-206ENST00000409141 C1orf53Q5VUE5 145 aa20.64■□□□□ 0.89
PDLIM2-206ENST00000409141 IL31RAQ8NI17 732 aa20.64■□□□□ 0.89
PDLIM2-206ENST00000409141 COPS5Q92905 334 aa20.64■□□□□ 0.89
PDLIM2-206ENST00000409141 NID2Q14112 1375 aa20.64■□□□□ 0.89
PDLIM2-206ENST00000409141 ELP1O95163 1332 aa20.64■□□□□ 0.89
PDLIM2-206ENST00000409141 hCG_1984214I3L0E3 225 aa20.63■□□□□ 0.89
PDLIM2-206ENST00000409141 ARIH2O95376 493 aa20.63■□□□□ 0.89
PDLIM2-206ENST00000409141 LY6KQ17RY6 165 aa20.63■□□□□ 0.89
PDLIM2-206ENST00000409141 CCDC62Q6P9F0 684 aa20.63■□□□□ 0.89
PDLIM2-206ENST00000409141 ZNF713Q8N859 430 aaPredicted RBP20.63■□□□□ 0.89
PDLIM2-206ENST00000409141 ZNF274Q96GC6 653 aaPredicted RBP20.63■□□□□ 0.89
PDLIM2-206ENST00000409141 ZFP91Q96JP5 570 aaPredicted RBP20.63■□□□□ 0.89
PDLIM2-206ENST00000409141 BRDTQ58F21 947 aaPredicted RBP20.62■□□□□ 0.89
PDLIM2-206ENST00000409141 CXCL17Q6UXB2 119 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms