RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 SLC30A10Q6XR72 485 aa14.91□□□□□ -0.02
SNORD88B-201ENST00000408454 CENPQQ7L2Z9 268 aaPredicted RBP14.91□□□□□ -0.02
SNORD88B-201ENST00000408454 IL23AQ9NPF7 189 aa14.91□□□□□ -0.02
SNORD88B-201ENST00000408454 PCDHA1Q9Y5I3 950 aa14.91□□□□□ -0.02
SNORD88B-201ENST00000408454 CCDC69A6NI79 296 aa14.9□□□□□ -0.02
SNORD88B-201ENST00000408454 A6NJR5 290 aa14.9□□□□□ -0.02
SNORD88B-201ENST00000408454 GCOM1H8Y6P7 765 aaPredicted RBP14.9□□□□□ -0.02
SNORD88B-201ENST00000408454 PITPNM1O00562 1244 aa14.9□□□□□ -0.02
SNORD88B-201ENST00000408454 CFBP00751 764 aa14.9□□□□□ -0.02
SNORD88B-201ENST00000408454 CD4P01730 458 aa14.9□□□□□ -0.02
SNORD88B-201ENST00000408454 MYL3P08590 195 aa14.9□□□□□ -0.02
SNORD88B-201ENST00000408454 POLR2MP0CAP2 368 aa14.9□□□□□ -0.02
SNORD88B-201ENST00000408454 BEX3Q00994 111 aa14.9□□□□□ -0.02
SNORD88B-201ENST00000408454 LAMC2Q13753 1193 aa14.9□□□□□ -0.02
SNORD88B-201ENST00000408454 DGKDQ16760 1214 aa14.9□□□□□ -0.02
SNORD88B-201ENST00000408454 FAM47CQ5HY64 1035 aa14.9□□□□□ -0.02
SNORD88B-201ENST00000408454 XRRA1Q6P2D8 792 aa14.9□□□□□ -0.02
SNORD88B-201ENST00000408454 UBA5Q9GZZ9 404 aa14.9□□□□□ -0.02
SNORD88B-201ENST00000408454 EHMT1Q9H9B1 1298 aa14.9□□□□□ -0.02
SNORD88B-201ENST00000408454 MRVI1Q9Y6F6 885 aa14.9□□□□□ -0.02
SNORD88B-201ENST00000408454 PNMA6FA0A0J9YX94 578 aa14.89□□□□□ -0.03
SNORD88B-201ENST00000408454 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.89□□□□□ -0.03
SNORD88B-201ENST00000408454 MYADML2A6NDP7 307 aa14.89□□□□□ -0.03
SNORD88B-201ENST00000408454 FGBP02675 491 aa14.89□□□□□ -0.03
SNORD88B-201ENST00000408454 CCND2P30279 289 aa14.89□□□□□ -0.03
SNORD88B-201ENST00000408454 PURAQ00577 322 aaKnown RBP14.89□□□□□ -0.03
SNORD88B-201ENST00000408454 GHRHRQ02643 423 aa14.89□□□□□ -0.03
SNORD88B-201ENST00000408454 NFXL1Q6ZNB6 911 aa14.89□□□□□ -0.03
SNORD88B-201ENST00000408454 SH3RF1Q7Z6J0 888 aa14.89□□□□□ -0.03
SNORD88B-201ENST00000408454 GIMAP8Q8ND71 665 aaPredicted RBP14.89□□□□□ -0.03
SNORD88B-201ENST00000408454 CAGE1Q8TC20 777 aa14.89□□□□□ -0.03
SNORD88B-201ENST00000408454 RRP36Q96EU6 259 aaKnown RBP14.89□□□□□ -0.03
SNORD88B-201ENST00000408454 ALDH8A1Q9H2A2 487 aaPredicted RBP14.89□□□□□ -0.03
SNORD88B-201ENST00000408454 JMJD4Q9H9V9 463 aa14.89□□□□□ -0.03
SNORD88B-201ENST00000408454 VAT1LQ9HCJ6 419 aa14.89□□□□□ -0.03
SNORD88B-201ENST00000408454 PALM3A6NDB9 673 aaPredicted RBP14.88□□□□□ -0.03
SNORD88B-201ENST00000408454 E7EWF7 191 aa14.88□□□□□ -0.03
SNORD88B-201ENST00000408454 EFCAB14O75071 495 aa14.88□□□□□ -0.03
SNORD88B-201ENST00000408454 CYP21A2P08686 494 aa14.88□□□□□ -0.03
SNORD88B-201ENST00000408454 GSPT1P15170 499 aaKnown RBP14.88□□□□□ -0.03
SNORD88B-201ENST00000408454 KRT32Q14532 448 aa14.88□□□□□ -0.03
SNORD88B-201ENST00000408454 GRM4Q14833 912 aa14.88□□□□□ -0.03
SNORD88B-201ENST00000408454 SEC23AQ15436 765 aa14.88□□□□□ -0.03
SNORD88B-201ENST00000408454 SYTL5Q8TDW5 730 aaPredicted RBP14.88□□□□□ -0.03
SNORD88B-201ENST00000408454 MAP4K1Q92918 833 aa14.88□□□□□ -0.03
SNORD88B-201ENST00000408454 EMID1Q96A84 441 aaPredicted RBP14.88□□□□□ -0.03
SNORD88B-201ENST00000408454 CDHR1Q96JP9 859 aa14.88□□□□□ -0.03
SNORD88B-201ENST00000408454 GAS2L1Q99501 681 aaPredicted RBP14.88□□□□□ -0.03
SNORD88B-201ENST00000408454 PPP1R12CQ9BZL4 782 aa14.88□□□□□ -0.03
SNORD88B-201ENST00000408454 SMCHD1A6NHR9 2005 aa14.88□□□□□ -0.03
SNORD88B-201ENST00000408454 KIF28PB7ZC32 967 aa14.87□□□□□ -0.03
SNORD88B-201ENST00000408454 CTAGE5O15320 804 aa14.87□□□□□ -0.03
SNORD88B-201ENST00000408454 NR3C2P08235 984 aa14.87□□□□□ -0.03
SNORD88B-201ENST00000408454 HMGB1P09429 215 aaKnown RBP14.87□□□□□ -0.03
SNORD88B-201ENST00000408454 HSD17B4P51659 736 aa14.87□□□□□ -0.03
SNORD88B-201ENST00000408454 BMP2KLQ5H9B9 411 aa14.87□□□□□ -0.03
SNORD88B-201ENST00000408454 HOMER1Q86YM7 354 aa14.87□□□□□ -0.03
SNORD88B-201ENST00000408454 DHX37Q8IY37 1157 aaKnown RBP14.87□□□□□ -0.03
SNORD88B-201ENST00000408454 HERVK_113Q902F9 699 aa14.87□□□□□ -0.03
SNORD88B-201ENST00000408454 TNPO1Q92973 898 aaKnown RBP14.87□□□□□ -0.03
SNORD88B-201ENST00000408454 GLT8D2Q9H1C3 349 aa14.87□□□□□ -0.03
SNORD88B-201ENST00000408454 PXMP2Q9NR77 195 aa14.87□□□□□ -0.03
SNORD88B-201ENST00000408454 PDGFCQ9NRA1 345 aa14.87□□□□□ -0.03
SNORD88B-201ENST00000408454 LRRC37A2A6NM11 1700 aa14.86□□□□□ -0.03
SNORD88B-201ENST00000408454 ADCY6O43306 1168 aa14.86□□□□□ -0.03
SNORD88B-201ENST00000408454 PPFIA4O75335 1185 aa14.86□□□□□ -0.03
SNORD88B-201ENST00000408454 RPLP2P05387 115 aaKnown RBP14.86□□□□□ -0.03
SNORD88B-201ENST00000408454 GNAT1P11488 350 aa14.86□□□□□ -0.03
SNORD88B-201ENST00000408454 CSF2RAP15509 400 aa14.86□□□□□ -0.03
SNORD88B-201ENST00000408454 DNAJB2P25686 324 aa14.86□□□□□ -0.03
SNORD88B-201ENST00000408454 LIFRP42702 1097 aa14.86□□□□□ -0.03
SNORD88B-201ENST00000408454 C9orf50Q5SZB4 431 aa14.86□□□□□ -0.03
SNORD88B-201ENST00000408454 SEPT14Q6ZU15 432 aa14.86□□□□□ -0.03
SNORD88B-201ENST00000408454 STOX1Q6ZVD7 989 aa14.86□□□□□ -0.03
SNORD88B-201ENST00000408454 RASGRP2Q7LDG7 609 aa14.86□□□□□ -0.03
SNORD88B-201ENST00000408454 C7orf31Q8N865 590 aa14.86□□□□□ -0.03
SNORD88B-201ENST00000408454 PPTC7Q8NI37 304 aa14.86□□□□□ -0.03
SNORD88B-201ENST00000408454 AFAP1L1Q8TED9 768 aa14.86□□□□□ -0.03
SNORD88B-201ENST00000408454 TIFAQ96CG3 184 aa14.86□□□□□ -0.03
SNORD88B-201ENST00000408454 MTMR8Q96EF0 704 aa14.86□□□□□ -0.03
SNORD88B-201ENST00000408454 SPZ1Q9BXG8 430 aa14.86□□□□□ -0.03
SNORD88B-201ENST00000408454 TSPYL2Q9H2G4 693 aaPredicted RBP14.86□□□□□ -0.03
SNORD88B-201ENST00000408454 RIOX1Q9H6W3 641 aa14.86□□□□□ -0.03
SNORD88B-201ENST00000408454 MAD2L2Q9UI95 211 aa14.86□□□□□ -0.03
SNORD88B-201ENST00000408454 RBM8AQ9Y5S9 174 aaKnown RBP14.86□□□□□ -0.03
SNORD88B-201ENST00000408454 SLC4A7Q9Y6M7 1214 aa14.86□□□□□ -0.03
SNORD88B-201ENST00000408454 ASTN1O14525 1302 aa14.86□□□□□ -0.03
SNORD88B-201ENST00000408454 NOP56O00567 594 aaKnown RBP14.85□□□□□ -0.03
SNORD88B-201ENST00000408454 BAIAP3O94812 1187 aa14.85□□□□□ -0.03
SNORD88B-201ENST00000408454 FOSL2P15408 326 aa14.85□□□□□ -0.03
SNORD88B-201ENST00000408454 PDE4AP27815 886 aa14.85□□□□□ -0.03
SNORD88B-201ENST00000408454 NEDD9Q14511 834 aa14.85□□□□□ -0.03
SNORD88B-201ENST00000408454 NLRX1Q86UT6 975 aa14.85□□□□□ -0.03
SNORD88B-201ENST00000408454 SESTD1Q86VW0 696 aa14.85□□□□□ -0.03
SNORD88B-201ENST00000408454 SMARCC2Q8TAQ2 1214 aa14.85□□□□□ -0.03
SNORD88B-201ENST00000408454 SYMPKQ92797 1274 aaKnown RBP14.85□□□□□ -0.03
SNORD88B-201ENST00000408454 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.85□□□□□ -0.035e-11■■■■□ 21.7
SNORD88B-201ENST00000408454 NOC4LQ9BVI4 516 aaKnown RBP14.85□□□□□ -0.03
SNORD88B-201ENST00000408454 SEMA6BQ9H3T3 888 aa14.85□□□□□ -0.03
SNORD88B-201ENST00000408454 SLC28A3Q9HAS3 691 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms