RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 CUEDC2Q9H467 287 aa13.23□□□□□ -0.29
PCNX4-204ENST00000406949 KIAA1024Q9UPX6 916 aa13.23□□□□□ -0.29
PCNX4-204ENST00000406949 MYH6P13533 1939 aa13.23□□□□□ -0.29
PCNX4-204ENST00000406949 ANKRD36CQ5JPF3 1778 aa13.23□□□□□ -0.29
PCNX4-204ENST00000406949 DUOX1Q9NRD9 1551 aa13.23□□□□□ -0.29
PCNX4-204ENST00000406949 SLC37A4O43826 429 aa13.23□□□□□ -0.29
PCNX4-204ENST00000406949 CLSTN1O94985 981 aa13.23□□□□□ -0.29
PCNX4-204ENST00000406949 SLC35G1Q2M3R5 365 aa13.23□□□□□ -0.29
PCNX4-204ENST00000406949 ADGRF4Q8IZF3 695 aa13.23□□□□□ -0.29
PCNX4-204ENST00000406949 EHBP1Q8NDI1 1231 aa13.23□□□□□ -0.29
PCNX4-204ENST00000406949 ABCA3Q99758 1704 aa13.23□□□□□ -0.29
PCNX4-204ENST00000406949 AFF2P51816 1311 aa13.23□□□□□ -0.29
PCNX4-204ENST00000406949 PDS5AQ29RF7 1337 aaKnown RBP13.23□□□□□ -0.29
PCNX4-204ENST00000406949 RHOBTB3O94955 611 aa13.23□□□□□ -0.29
PCNX4-204ENST00000406949 TERF2Q15554 542 aa13.23□□□□□ -0.29
PCNX4-204ENST00000406949 KRT26Q7Z3Y9 468 aa13.23□□□□□ -0.29
PCNX4-204ENST00000406949 SPICE1Q8N0Z3 855 aa13.23□□□□□ -0.29
PCNX4-204ENST00000406949 GIMAP8Q8ND71 665 aaPredicted RBP13.23□□□□□ -0.29
PCNX4-204ENST00000406949 DDX12PQ92771 950 aa13.23□□□□□ -0.29
PCNX4-204ENST00000406949 NUP58Q9BVL2 599 aa13.23□□□□□ -0.29
PCNX4-204ENST00000406949 IFIH1Q9BYX4 1025 aaKnown RBP13.23□□□□□ -0.29
PCNX4-204ENST00000406949 PLEKHA4Q9H4M7 779 aa13.23□□□□□ -0.29
PCNX4-204ENST00000406949 HAUS4Q9H6D7 363 aa13.23□□□□□ -0.29
PCNX4-204ENST00000406949 NHEJ1Q9H9Q4 299 aaPredicted RBP13.23□□□□□ -0.29
PCNX4-204ENST00000406949 SAR1BQ9Y6B6 198 aa13.23□□□□□ -0.29
PCNX4-204ENST00000406949 KCNB1Q14721 858 aa13.22□□□□□ -0.29
PCNX4-204ENST00000406949 ZYXQ15942 572 aaKnown RBP13.22□□□□□ -0.29
PCNX4-204ENST00000406949 PRR16Q569H4 304 aa13.22□□□□□ -0.29
PCNX4-204ENST00000406949 APTXQ7Z2E3 356 aaKnown RBP13.22□□□□□ -0.29
PCNX4-204ENST00000406949 C4orf32Q8N8J7 132 aa13.22□□□□□ -0.29
PCNX4-204ENST00000406949 KIFC2Q96AC6 838 aa13.22□□□□□ -0.29
PCNX4-204ENST00000406949 CHD4Q14839 1912 aa13.22□□□□□ -0.29
PCNX4-204ENST00000406949 SPDYE3A6NKU9 549 aa13.22□□□□□ -0.29
PCNX4-204ENST00000406949 TACC1O75410 805 aa13.22□□□□□ -0.29
PCNX4-204ENST00000406949 MRPS25P82663 173 aaKnown RBP13.22□□□□□ -0.29
PCNX4-204ENST00000406949 GPBP1Q86WP2 473 aa13.22□□□□□ -0.29
PCNX4-204ENST00000406949 KBTBD4Q9NVX7 518 aa13.22□□□□□ -0.29
PCNX4-204ENST00000406949 MYMKA6NI61 221 aa13.22□□□□□ -0.29
PCNX4-204ENST00000406949 MEIS1O00470 390 aa13.22□□□□□ -0.29
PCNX4-204ENST00000406949 CHMP2AO43633 222 aa13.22□□□□□ -0.29
PCNX4-204ENST00000406949 IRX3P78415 501 aaPredicted RBP13.22□□□□□ -0.29
PCNX4-204ENST00000406949 CYP4A11Q02928 519 aa13.22□□□□□ -0.29
PCNX4-204ENST00000406949 RAPGEF1Q13905 1077 aa13.22□□□□□ -0.29
PCNX4-204ENST00000406949 MYOCDQ8IZQ8 938 aa13.22□□□□□ -0.29
PCNX4-204ENST00000406949 LRRC27Q9C0I9 530 aa13.22□□□□□ -0.29
PCNX4-204ENST00000406949 FHOD1Q9Y613 1164 aa13.22□□□□□ -0.29
PCNX4-204ENST00000406949 MYL1P05976 194 aa13.21□□□□□ -0.29
PCNX4-204ENST00000406949 PRPHP41219 470 aa13.21□□□□□ -0.29
PCNX4-204ENST00000406949 RNASE9P60153 205 aaKnown RBP13.21□□□□□ -0.29
PCNX4-204ENST00000406949 ALS2CR12Q96Q35 445 aa13.21□□□□□ -0.29
PCNX4-204ENST00000406949 QTRT2Q9H974 415 aaKnown RBP13.21□□□□□ -0.29
PCNX4-204ENST00000406949 PDE11AQ9HCR9 933 aa13.21□□□□□ -0.29
PCNX4-204ENST00000406949 PANK4Q9NVE7 773 aa13.21□□□□□ -0.29
PCNX4-204ENST00000406949 ITIH6Q6UXX5 1313 aa13.21□□□□□ -0.29
PCNX4-204ENST00000406949 WHAMMP3Q1A5X7 153 aa13.21□□□□□ -0.29
PCNX4-204ENST00000406949 CERKLQ49MI3 558 aaPredicted RBP13.21□□□□□ -0.29
PCNX4-204ENST00000406949 FAM26FQ5R3K3 315 aa13.21□□□□□ -0.29
PCNX4-204ENST00000406949 SLFN13Q68D06 897 aa13.21□□□□□ -0.29
PCNX4-204ENST00000406949 HDXQ7Z353 690 aa13.21□□□□□ -0.29
PCNX4-204ENST00000406949 CCDC65Q8IXS2 484 aa13.21□□□□□ -0.29
PCNX4-204ENST00000406949 SUGCTQ9HAC7 445 aa13.21□□□□□ -0.29
PCNX4-204ENST00000406949 MAGEF1Q9HAY2 307 aa13.21□□□□□ -0.29
PCNX4-204ENST00000406949 NHSL1Q5SYE7 1610 aa13.21□□□□□ -0.3
PCNX4-204ENST00000406949 UTRNP46939 3433 aa13.21□□□□□ -0.3
PCNX4-204ENST00000406949 COL4A1P02462 1669 aa13.21□□□□□ -0.3
PCNX4-204ENST00000406949 PNMA6FA0A0J9YX94 578 aa13.21□□□□□ -0.3
PCNX4-204ENST00000406949 CXCR5P32302 372 aa13.21□□□□□ -0.3
PCNX4-204ENST00000406949 MAGEA1P43355 309 aa13.21□□□□□ -0.3
PCNX4-204ENST00000406949 ZBED6P86452 979 aa13.21□□□□□ -0.3
PCNX4-204ENST00000406949 NFIAQ12857 509 aa13.21□□□□□ -0.3
PCNX4-204ENST00000406949 DCAF17Q5H9S7 520 aaPredicted RBP13.21□□□□□ -0.3
PCNX4-204ENST00000406949 TTI2Q6NXR4 508 aa13.21□□□□□ -0.3
PCNX4-204ENST00000406949 TMED8Q6PL24 325 aaPredicted RBP13.21□□□□□ -0.3
PCNX4-204ENST00000406949 NDST4Q9H3R1 872 aa13.21□□□□□ -0.3
PCNX4-204ENST00000406949 E9PMD0 336 aa13.2□□□□□ -0.3
PCNX4-204ENST00000406949 BUB1O43683 1085 aa13.2□□□□□ -0.3
PCNX4-204ENST00000406949 KIF20AO95235 890 aa13.2□□□□□ -0.3
PCNX4-204ENST00000406949 PPP1R2P41236 205 aa13.2□□□□□ -0.3
PCNX4-204ENST00000406949 RHBDL3P58872 404 aa13.2□□□□□ -0.3
PCNX4-204ENST00000406949 PTPROQ16827 1216 aa13.2□□□□□ -0.3
PCNX4-204ENST00000406949 UTP14CQ5TAP6 766 aaKnown RBP13.2□□□□□ -0.3
PCNX4-204ENST00000406949 DAGLBQ8NCG7 672 aa13.2□□□□□ -0.3
PCNX4-204ENST00000406949 SPAG5Q96R06 1193 aa13.2□□□□□ -0.3
PCNX4-204ENST00000406949 COA1Q9GZY4 146 aa13.2□□□□□ -0.3
PCNX4-204ENST00000406949 ABCB6Q9NP58 842 aa13.2□□□□□ -0.3
PCNX4-204ENST00000406949 DDX4Q9NQI0 724 aaKnown RBP13.2□□□□□ -0.3
PCNX4-204ENST00000406949 MKRN1Q9UHC7 482 aaKnown RBP13.2□□□□□ -0.3
PCNX4-204ENST00000406949 STAT3P40763 770 aa13.2□□□□□ -0.3
PCNX4-204ENST00000406949 CKAP4Q07065 602 aaKnown RBP13.2□□□□□ -0.3
PCNX4-204ENST00000406949 BRD3Q15059 726 aa13.2□□□□□ -0.3
PCNX4-204ENST00000406949 RUFY1Q96T51 708 aa13.2□□□□□ -0.3
PCNX4-204ENST00000406949 ATP1A1P05023 1023 aaKnown RBP13.19□□□□□ -0.3
PCNX4-204ENST00000406949 PAFAH1B1P43034 410 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 ICA1Q05084 483 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 PABPC4Q13310 644 aaKnown RBP eCLIP13.19□□□□□ -0.3
PCNX4-204ENST00000406949 IQCEQ6IPM2 695 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 IRF2BP1Q8IU81 584 aa13.19□□□□□ -0.3
PCNX4-204ENST00000406949 NOA1Q8NC60 698 aaKnown RBP13.19□□□□□ -0.3
PCNX4-204ENST00000406949 LUC7LQ9NQ29 371 aaKnown RBP13.19□□□□□ -0.3
PCNX4-204ENST00000406949 SEPT11Q9NVA2 429 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms